| 1. |
- Wang, Li-San, et al.
(författare)
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Rarity of the Alzheimer Disease-Protective APP A673T Variant in the United States.
- 2015
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Ingår i: JAMA neurology. - : American Medical Association (AMA). - 2168-6157 .- 2168-6149. ; 72:2
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Tidskriftsartikel (refereegranskat)abstract
- Recently, a rare variant in the amyloid precursor protein gene (APP) was described in a population from Iceland. This variant, in which alanine is replaced by threonine at position 673 (A673T), appears to protect against late-onset Alzheimer disease (AD). We evaluated the frequency of this variant in AD cases and cognitively normal controls to determine whether this variant will significantly contribute to risk assessment in individuals in the United States.
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| 2. |
- Gallagher, Michael D., et al.
(författare)
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TMEM106B is a genetic modifier of frontotemporal lobar degeneration with C9orf72 hexanucleotide repeat expansions
- 2014
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Ingår i: Acta Neuropathologica. - : Springer Science and Business Media LLC. - 0001-6322 .- 1432-0533. ; 127:3, s. 407-418
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Tidskriftsartikel (refereegranskat)abstract
- Hexanucleotide repeat expansions in chromosome 9 open reading frame 72 (C9orf72) have recently been linked to frontotemporal lobar degeneration (FTLD) and amyotrophic lateral sclerosis, and may be the most common genetic cause of both neurodegenerative diseases. Genetic variants at TMEM106B influence risk for the most common neuropathological subtype of FTLD, characterized by inclusions of TAR DNA-binding protein of 43 kDa (FTLD-TDP). Previous reports have shown that TMEM106B is a genetic modifier of FTLD-TDP caused by progranulin (GRN) mutations, with the major (risk) allele of rs1990622 associating with earlier age at onset of disease. Here, we report that rs1990622 genotype affects age at death in a single-site discovery cohort of FTLD patients with C9orf72 expansions (n = 14), with the major allele correlated with later age at death (p = 0.024). We replicate this modifier effect in a 30-site international neuropathological cohort of FTLD-TDP patients with C9orf72 expansions (n = 75), again finding that the major allele associates with later age at death (p = 0.016), as well as later age at onset (p = 0.019). In contrast, TMEM106B genotype does not affect age at onset or death in 241 FTLD-TDP cases negative for GRN mutations or C9orf72 expansions. Thus, TMEM106B is a genetic modifier of FTLD with C9orf72 expansions. Intriguingly, the genotype that confers increased risk for developing FTLD-TDP (major, or T, allele of rs1990622) is associated with later age at onset and death in C9orf72 expansion carriers, providing an example of sign epistasis in human neurodegenerative disease.
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| 3. |
- Fauchez, Thomas J. J., et al.
(författare)
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TRAPPIST Habitable Atmosphere Intercomparison (THAI) Workshop Report
- 2021
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Ingår i: The Planetary Science Journal. - : Institute of Physics Publishing (IOPP). - 2632-3338. ; 2:3
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Tidskriftsartikel (refereegranskat)abstract
- The era of atmospheric characterization of terrestrial exoplanets is just around the corner. Modeling prior to observations is crucial in order to predict the observational challenges and to prepare for the data interpretation. This paper presents the report of the TRAPPIST Habitable Atmosphere Intercomparison workshop (2020 September 14-16). A review of the climate models and parameterizations of the atmospheric processes on terrestrial exoplanets, model advancements, and limitations, as well as direction for future model development, was discussed. We hope that this report will be used as a roadmap for future numerical simulations of exoplanet atmospheres and maintaining strong connections to the astronomical community.
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| 4. |
- Andrews, David J., et al.
(författare)
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Plasma observations during the Mars atmospheric "plume" event of March-April 2012
- 2016
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Ingår i: Journal of Geophysical Research - Space Physics. - 2169-9380 .- 2169-9402. ; 121:4, s. 3139-3154
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Tidskriftsartikel (refereegranskat)abstract
- We present initial analyses and conclusions from plasma observations made during the reported "Mars plume event" of March-April 2012. During this period, multiple independent amateur observers detected a localized, high-altitude "plume" over the Martian dawn terminator, the cause of which remains to be explained. The estimated brightness of the plume exceeds that expected for auroral emissions, and its projected altitude greatly exceeds that at which clouds are expected to form. We report on in situ measurements of ionospheric plasma density and solar wind parameters throughout this interval made by Mars Express, obtained over the same surface region but at the opposing terminator. Measurements in the ionosphere at the corresponding location frequently show a disturbed structure, though this is not atypical for such regions with intense crustal magnetic fields. We tentatively conclude that the formation and/or transport of this plume to the altitudes where it was observed could be due in part to the result of a large interplanetary coronal mass ejection (ICME) encountering the Martian system. Interestingly, we note that the only similar plume detection in May 1997 may also have been associated with a large ICME impact at Mars.
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| 5. |
- Del Genio, Anthony D., et al.
(författare)
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Climates of Warm Earth-like Planets. III. Fractional Habitability from a Water Cycle Perspective
- 2019
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Ingår i: Astrophysical Journal. - : IOP PUBLISHING LTD. - 0004-637X .- 1538-4357. ; 887:2
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Tidskriftsartikel (refereegranskat)abstract
- The habitable fraction of a planet's surface is important for the detectability of surface biosignatures. The extent and distribution of habitable areas are influenced by external parameters that control the planet's climate, atmospheric circulation, and hydrological cycle. We explore these issues using the ROCKE-3D general circulation model, focusing on terrestrial water fluxes and thus the potential for the existence of complex life on land. Habitability is examined as a function of insolation and planet rotation for an Earth-like world with zero obliquity and eccentricity orbiting the Sun. We assess fractional habitability using an aridity index that measures the net supply of water to the land. Earth-like planets become "superhabitable" (a larger habitable surface area than Earth) as insolation and day-length increase because their climates become more equable, reminiscent of past warm periods on Earth when complex life was abundant and widespread. The most slowly rotating, most highly irradiated planets, though, occupy a hydrological regime unlike any on Earth, with extremely warm, humid conditions at high latitudes but little rain and subsurface water storage. Clouds increasingly obscure the surface as insolation increases, but visibility improves for modest increases in rotation period. Thus, moderately slowly rotating rocky planets with insolation near or somewhat greater than modern Earth's appear to be promising targets for surface characterization by a future direct imaging mission.
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| 6. |
- Fauchez, Thomas J., et al.
(författare)
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The TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI). III. Simulated Observables-the Return of the Spectrum
- 2022
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Ingår i: The Planetary Science Journal. - : Institute of Physics Publishing (IOPP). - 2632-3338. ; 3:9
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Tidskriftsartikel (refereegranskat)abstract
- The TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI) is a community project that aims to quantify how differences in general circulation models (GCMs) could impact the climate prediction for TRAPPIST-1e and, subsequently, its atmospheric characterization in transit. Four GCMs have participated in THAI: ExoCAM, LMD-Generic, ROCKE-3D, and the UM. This paper, focused on the simulated observations, is the third part of a trilogy, following the analysis of two land planet scenarios (Part I) and two aquaplanet scenarios (Part II). Here we show a robust agreement between the simulated spectra and the number of transits estimated to detect the land planet atmospheres. For the cloudy aquaplanet ones, a 5 sigma detection of CO2 could be achieved in about 10 transits if the atmosphere contains at least 1 bar of CO2. That number can vary by 41%-56% depending on the GCM used to predict the terminator profiles, principally due to differences in the cloud deck altitude, with ExoCAM and LMD-G producing higher clouds than ROCKE-3D and UM. Therefore, for the first time, this work provides "GCM uncertainty error bars" of similar to 50% that need to be considered in future analyses of transmission spectra. We also analyzed the intertransit spectral variability. Its magnitude differs significantly between the GCMs, but its impact on the transmission spectra is within the measurement uncertainties. THAI has demonstrated the importance of model intercomparison for exoplanets and also paved the way for a larger project to develop an intercomparison meta-framework, namely, the Climates Using Interactive Suites of Intercomparisons Nested for Exoplanet Studies.
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| 7. |
- Kumarathunge, Dushan P., et al.
(författare)
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Acclimation and adaptation components of the temperature dependence of plant photosynthesis at the global scale
- 2019
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Ingår i: New Phytologist. - : John Wiley & Sons. - 0028-646X .- 1469-8137. ; 222:2, s. 768-784
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Tidskriftsartikel (refereegranskat)abstract
- The temperature response of photosynthesis is one of the key factors determining predicted responses to warming in global vegetation models (GVMs). The response may vary geographically, owing to genetic adaptation to climate, and temporally, as a result of acclimation to changes in ambient temperature. Our goal was to develop a robust quantitative global model representing acclimation and adaptation of photosynthetic temperature responses.We quantified and modelled key mechanisms responsible for photosynthetic temperature acclimation and adaptation using a global dataset of photosynthetic CO2 response curves, including data from 141 C3 species from tropical rainforest to Arctic tundra. We separated temperature acclimation and adaptation processes by considering seasonal and common-garden datasets, respectively.The observed global variation in the temperature optimum of photosynthesis was primarily explained by biochemical limitations to photosynthesis, rather than stomatal conductance or respiration. We found acclimation to growth temperature to be a stronger driver of this variation than adaptation to temperature at climate of origin.We developed a summary model to represent photosynthetic temperature responses and showed that it predicted the observed global variation in optimal temperatures with high accuracy. This novel algorithm should enable improved prediction of the function of global ecosystems in a warming climate.
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| 8. |
- Sergeev, Denis E., et al.
(författare)
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The TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI). II. Moist Cases-The Two Waterworlds
- 2022
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Ingår i: The Planetary Science Journal. - : IOP Publishing Ltd. - 2632-3338. ; 3:9
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Tidskriftsartikel (refereegranskat)abstract
- To identify promising exoplanets for atmospheric characterization and to make the best use of observational data, a thorough understanding of their atmospheres is needed. Three-dimensional general circulation models (GCMs) are one of the most comprehensive tools available for this task and will be used to interpret observations of temperate rocky exoplanets. Due to parameterization choices made in GCMs, they can produce different results, even for the same planet. Employing four widely used exoplanetary GCMs-ExoCAM, LMD-G, ROCKE-3D, and the UM-we continue the TRAPPIST-1 Habitable Atmosphere Intercomparison by modeling aquaplanet climates of TRAPPIST-1e with a moist atmosphere dominated by either nitrogen or carbon dioxide. Although the GCMs disagree on the details of the simulated regimes, they all predict a temperate climate with neither of the two cases pushed out of the habitable state. Nevertheless, the intermodel spread in the global mean surface temperature is nonnegligible: 14 K and 24 K in the nitrogen- and carbon dioxide-dominated case, respectively. We find substantial intermodel differences in moist variables, with the smallest amount of clouds in LMD-Generic and the largest in ROCKE-3D. ExoCAM predicts the warmest climate for both cases and thus has the highest water vapor content and the largest amount and variability of cloud condensate. The UM tends to produce colder conditions, especially in the nitrogen-dominated case due to a strong negative cloud radiative effect on the day side of TRAPPIST-1e. Our study highlights various biases of GCMs and emphasizes the importance of not relying solely on one model to understand exoplanet climates.
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| 9. |
- Turbet, Martin, et al.
(författare)
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The TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI). I. Dry Cases-The Fellowship of the GCMs
- 2022
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Ingår i: The Planetary Science Journal. - : IOP Publishing Ltd. - 2632-3338. ; 3:9
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Tidskriftsartikel (refereegranskat)abstract
- With the commissioning of powerful, new-generation telescopes such as the James Webb Space Telescope (JWST) and the ground-based Extremely Large Telescopes, the first characterization of a high molecular weight atmosphere around a temperate rocky exoplanet is imminent. Atmospheric simulations and synthetic observables of target exoplanets are essential to prepare and interpret these observations. Here we report the results of the first part of the TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI) project, which compares 3D numerical simulations performed with four state-of-the-art global climate models (ExoCAM, LMD-Generic, ROCKE-3D, Unified Model) for the potentially habitable target TRAPPIST-1e. In this first part, we present the results of dry atmospheric simulations. These simulations serve as a benchmark to test how radiative transfer, subgrid-scale mixing (dry turbulence and convection), and large-scale dynamics impact the climate of TRAPPIST-1e and consequently the transit spectroscopy signature as seen by JWST. To first order, the four models give results in good agreement. The intermodel spread in the global mean surface temperature amounts to 7 K (6 K) for the N-2-dominated (CO2-dominated) atmosphere. The radiative fluxes are also remarkably similar (intermodel variations less than 5%), from the surface (1 bar) up to atmospheric pressures similar to 5 mbar. Moderate differences between the models appear in the atmospheric circulation pattern (winds) and the (stratospheric) thermal structure. These differences arise between the models from (1) large-scale dynamics, because TRAPPIST-1e lies at the tipping point between two different circulation regimes (fast and Rhines rotators) in which the models can be alternatively trapped, and (2) parameterizations used in the upper atmosphere such as numerical damping.
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| 10. |
- Way, Michael J., et al.
(författare)
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The Climates of Earth's Next Supercontinent : Effects of Tectonics, Rotation Rate, and Insolation
- 2021
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Ingår i: Geochemistry Geophysics Geosystems. - : American Geophysical Union (AGU). - 1525-2027. ; 22:8
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Tidskriftsartikel (refereegranskat)abstract
- We explore two possible Earth climate scenarios, 200 and 250 million years into the future, using projections of the evolution of plate tectonics, solar luminosity, and rotation rate. In one scenario, a supercontinent forms at low latitudes, whereas in the other it forms at high northern latitudes with an Antarctic subcontinent remaining at the south pole. The climates between these two end points are quite stark, with differences in mean surface temperatures approaching several degrees. The main factor in these differences is related to the topographic height of the high latitude supercontinents where higher elevations promote snowfall and subsequent higher planetary albedos. These results demonstrate the need to consider multiple boundary conditions when simulating Earth-like exoplanetary climates. Plain Language Summary We investigate two tantalizing Earth climate scenarios 200 and 250 million years into the future. We show the role played by plate tectonics, the sun's increase in brightness, and a slightly slower rotation rate in these future climate scenarios. In one case the present day continents form into a single land-mass near the equator, and in the other case Antarctica stays put, but the rest of the present day continents are mostly pushed well north of the equator. The difference in the mean surface temperatures of these two cases differ by several degrees Celsius, while also being distinct in the total surface area in which they maintain temperatures allowing liquid water to exist year round.
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