| 1. |
- Luo, Yifei, et al.
(författare)
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Technology Roadmap for Flexible Sensors
- 2023
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Ingår i: ACS Nano. - : American Chemical Society. - 1936-0851 .- 1936-086X. ; 17:6, s. 5211-5295
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Forskningsöversikt (refereegranskat)abstract
- Humans rely increasingly on sensors to address grand challenges and to improve quality of life in the era of digitalization and big data. For ubiquitous sensing, flexible sensors are developed to overcome the limitations of conventional rigid counterparts. Despite rapid advancement in bench-side research over the last decade, the market adoption of flexible sensors remains limited. To ease and to expedite their deployment, here, we identify bottlenecks hindering the maturation of flexible sensors and propose promising solutions. We first analyze challenges in achieving satisfactory sensing performance for real-world applications and then summarize issues in compatible sensor-biology interfaces, followed by brief discussions on powering and connecting sensor networks. Issues en route to commercialization and for sustainable growth of the sector are also analyzed, highlighting environmental concerns and emphasizing nontechnical issues such as business, regulatory, and ethical considerations. Additionally, we look at future intelligent flexible sensors. In proposing a comprehensive roadmap, we hope to steer research efforts towards common goals and to guide coordinated development strategies from disparate communities. Through such collaborative efforts, scientific breakthroughs can be made sooner and capitalized for the betterment of humanity.
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| 2. |
- Sampson, Joshua N., et al.
(författare)
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Analysis of Heritability and Shared Heritability Based on Genome-Wide Association Studies for 13 Cancer Types
- 2015
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Ingår i: Journal of the National Cancer Institute. - : Oxford University Press (OUP). - 0027-8874 .- 1460-2105. ; 107:12
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Tidskriftsartikel (refereegranskat)abstract
- Background: Studies of related individuals have consistently demonstrated notable familial aggregation of cancer. We aim to estimate the heritability and genetic correlation attributable to the additive effects of common single-nucleotide polymorphisms (SNPs) for cancer at 13 anatomical sites. Methods: Between 2007 and 2014, the US National Cancer Institute has generated data from genome-wide association studies (GWAS) for 49 492 cancer case patients and 34 131 control patients. We apply novel mixed model methodology (GCTA) to this GWAS data to estimate the heritability of individual cancers, as well as the proportion of heritability attributable to cigarette smoking in smoking-related cancers, and the genetic correlation between pairs of cancers. Results: GWAS heritability was statistically significant at nearly all sites, with the estimates of array-based heritability, h(l)(2), on the liability threshold (LT) scale ranging from 0.05 to 0.38. Estimating the combined heritability of multiple smoking characteristics, we calculate that at least 24% (95% confidence interval [CI] = 14% to 37%) and 7% (95% CI = 4% to 11%) of the heritability for lung and bladder cancer, respectively, can be attributed to genetic determinants of smoking. Most pairs of cancers studied did not show evidence of strong genetic correlation. We found only four pairs of cancers with marginally statistically significant correlations, specifically kidney and testes (rho = 0.73, SE = 0.28), diffuse large B-cell lymphoma (DLBCL) and pediatric osteosarcoma (rho = 0.53, SE = 0.21), DLBCL and chronic lymphocytic leukemia (CLL) (rho = 0.51, SE = 0.18), and bladder and lung (rho = 0.35, SE = 0.14). Correlation analysis also indicates that the genetic architecture of lung cancer differs between a smoking population of European ancestry and a nonsmoking Asian population, allowing for the possibility that the genetic etiology for the same disease can vary by population and environmental exposures. Conclusion: Our results provide important insights into the genetic architecture of cancers and suggest new avenues for investigation.
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| 3. |
- Birney, Ewan, et al.
(författare)
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
- 2007
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 447:7146, s. 799-816
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Tidskriftsartikel (refereegranskat)abstract
- We report the generation and analysis of functional data from multiple, diverse experiments performed on a targeted 1% of the human genome as part of the pilot phase of the ENCODE Project. These data have been further integrated and augmented by a number of evolutionary and computational analyses. Together, our results advance the collective knowledge about human genome function in several major areas. First, our studies provide convincing evidence that the genome is pervasively transcribed, such that the majority of its bases can be found in primary transcripts, including non-protein-coding transcripts, and those that extensively overlap one another. Second, systematic examination of transcriptional regulation has yielded new understanding about transcription start sites, including their relationship to specific regulatory sequences and features of chromatin accessibility and histone modification. Third, a more sophisticated view of chromatin structure has emerged, including its inter-relationship with DNA replication and transcriptional regulation. Finally, integration of these new sources of information, in particular with respect to mammalian evolution based on inter- and intra-species sequence comparisons, has yielded new mechanistic and evolutionary insights concerning the functional landscape of the human genome. Together, these studies are defining a path for pursuit of a more comprehensive characterization of human genome function.
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| 4. |
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| 5. |
- Song, Lu, et al.
(författare)
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Vacancy-ordered yttria stabilized zirconia as a low-temperature electronic conductor achieved by laser melting
- 2019
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Ingår i: Journal of the European Ceramic Society. - : Elsevier BV. - 0955-2219 .- 1873-619X. ; 39:4, s. 1374-1380
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Tidskriftsartikel (refereegranskat)abstract
- Laser melting is known to be capable in initiating thorough evolution in microstructure and bringing novel functional performance in metals. But realization of this potential in ceramics only reaches a preliminary stage that needs further investigation. Here we demonstrate zirconia, traditionally an insulative ceramic at low temperature, could be transformed into an electronic conductor with the conductivity on order of 10(-3) S.cm(-1) at room temperature by a simple laser melting process without inducing metallic phases. Transmission electron microscopy and ab-initio simulation show that oversaturated oxygen vacancies, together with their ordered metastable distribution along < 001 >, are introduced during this non-equilibrium process, and result in a clear defect level significantly narrowing bandgap to less than 1 eV, leading to the considerable electronic conductivity. These results identify a strategy of utilizing this non-equilibrium method in oxide ceramics to realize some unconventional performances determined by metastable structure thoroughly altered down to atomic level.
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| 6. |
- Sun, Jia-Qi, et al.
(författare)
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Spatholobus suberectus Column Extract Inhibits Estrogen Receptor Positive Breast Cancer via Suppressing ER MAPK PI3K/AKT Pathway
- 2016
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Ingår i: Evidence-based Complementary and Alternative Medicine. - : Hindawi Limited. - 1741-427X .- 1741-4288.
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Tidskriftsartikel (refereegranskat)abstract
- Although Chinese herbal compounds have long been alternatively applied for cancer treatment in China, their treatment effects have not been sufficiently investigated. The Chinese herb Spatholobus suberectus is commonly prescribed to cancer patients. HPLC analysis has shown that the main components of Spatholobus suberectus are flavonoids that can be classified as phytoestrogens, having a structure similar to estrogen. This study was designed to investigate the effects of Spatholobus suberectus column extract (SSCE) on the estrogen receptor-positive (ER+) breast cancer cell line MCF-7 and its possible molecular mechanism. In our study, MTT assay was performed to evaluate cell viability. The results show that SSCE (80, 160, and 320 mu g/ml) significantly decreased the viability of MCF-7 cells. SSCE also triggered apoptosis, arrested the cell cycle at the G0/G1 phase, and inhibited cell migration. A dual-luciferase reporter system showed that SSCE suppressed intranuclear p-ER activity; Western blot analysis confirmed the repressed expression of phosphorylated-ER alpha (p-ER alpha), ERK1/2, p-ERK1/2, AKT, p-AKT, p-mTOR, PI3K, and p-PI3K, indicating that SSCE suppressed the MAPK PI3K/AKT signaling pathway. Collectively, our results suggest that SSCE causes apoptosis, an arrest in the G0/G1 phase, and a decrease in migration in ER+ MCF-7 cells via hypoactivity of the ER and suppression of the MAPK PI3K/AKT pathway.
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| 7. |
- Wang, Zhaoming, et al.
(författare)
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Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33
- 2014
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Ingår i: Human Molecular Genetics. - : Oxford University Press (OUP). - 0964-6906 .- 1460-2083. ; 23:24, s. 6616-6633
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Tidskriftsartikel (refereegranskat)abstract
- Genome-wide association studies (GWAS) have mapped risk alleles for at least 10 distinct cancers to a small region of 63 000 bp on chromosome 5p15.33. This region harbors the TERT and CLPTM1L genes; the former encodes the catalytic subunit of telomerase reverse transcriptase and the latter may play a role in apoptosis. To investigate further the genetic architecture of common susceptibility alleles in this region, we conducted an agnostic subset-based meta-analysis (association analysis based on subsets) across six distinct cancers in 34 248 cases and 45 036 controls. Based on sequential conditional analysis, we identified as many as six independent risk loci marked by common single-nucleotide polymorphisms: five in the TERT gene (Region 1: rs7726159, P = 2.10 × 10(-39); Region 3: rs2853677, P = 3.30 × 10(-36) and PConditional = 2.36 × 10(-8); Region 4: rs2736098, P = 3.87 × 10(-12) and PConditional = 5.19 × 10(-6), Region 5: rs13172201, P = 0.041 and PConditional = 2.04 × 10(-6); and Region 6: rs10069690, P = 7.49 × 10(-15) and PConditional = 5.35 × 10(-7)) and one in the neighboring CLPTM1L gene (Region 2: rs451360; P = 1.90 × 10(-18) and PConditional = 7.06 × 10(-16)). Between three and five cancers mapped to each independent locus with both risk-enhancing and protective effects. Allele-specific effects on DNA methylation were seen for a subset of risk loci, indicating that methylation and subsequent effects on gene expression may contribute to the biology of risk variants on 5p15.33. Our results provide strong support for extensive pleiotropy across this region of 5p15.33, to an extent not previously observed in other cancer susceptibility loci.
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| 8. |
- Xu, Nan, et al.
(författare)
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Global optimization energy management for multi-energy source vehicles based on "Information layer - Physical layer - Energy layer- Dynamic programming" (IPE-DP)
- 2022
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Ingår i: Applied Energy. - : Elsevier BV. - 0306-2619 .- 1872-9118. ; 312
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Tidskriftsartikel (refereegranskat)abstract
- To reveal the energy-saving mechanisms of global energy management, we propose a global optimization framework of "information layer-physical layer-energy layer-dynamic programming " (IPE-DP), which can realize the unity of different information scenarios, different vehicle configurations and energy conversions. The deterministic dynamic programing (DP) and adaptive dynamic programming (ADP) are taken as the core algorithms. As a benchmark for assessing the optimality, DP strategy has four main challenges: standardization, real-time application, accuracy, and satisfactory drivability. To solve the above problems, the IPE-DP optimization framework is established, which consists of three main layers, two interface layers and an application layer. To be specific, the full-factor trip information is acquired from three scenarios in the information layer, and then the feasible work modes of the vehicle are determined in the physical layer based on the proposed conservation framework of "kinetic/potential energy & onboard energy ". The above lays a foundation for the optimal energy distribution in the energy layer. Then, a global domain-searching algorithm and action dependent heuristic dynamic programming (ADHDP) model are developed for different information acquisition scenarios to obtain the optimal solution. To improve the computational efficiency under the deterministic information, a fast DP is developed based on the statistical rules of DP behavior, the core of which is to restrict the exploring region based on a reference SOC trajectory. Regarding the stochastic trip information, the ADHDP model is established, including determining the utility function, network design and training process. Finally, two case studies are given to compare the economic performance of the vehicle under different information acquisition scenarios, which lays a foundation for analyzing the relationship between the amount of information input and energy-saving potential of the vehicle. Simulation results demonstrate that the proposed method gains a better performance in both real-time performance and global optimality.
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| 9. |
- Xu, Wen, et al.
(författare)
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Localized surface plasmon resonances in self-doped copper chalcogenide binary nanocrystals and their emerging applications
- 2020
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Ingår i: Nano Today. - : Elsevier BV. - 1748-0132 .- 1878-044X. ; 33, s. 100892-
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Forskningsöversikt (refereegranskat)abstract
- Owing to their extraordinary surface plasmon and semiconductor properties, copper chalcogenide nanocrystals (NCs) have experienced a steeply increased interest for various types of applications since the first discovery of their plasmonic property in 2009. This article critically and comprehensively reviews the decade long research effort devoted to doped plasmonic copper chalcogenide binary NCs with respect to their synthesis methods, their theoretical description and various applications. In particular, we focus on factors that impact their localized surface plasmon resonances (LSPRs) and on methods used for tuning the LSPRs. We emphasize the underlying mechanisms of LSPR generation and the unique roles and advantages of the copper chalcogenide NCs with respect to the commonly attended plasmonic metal nanoparticles. Finally, we review current challenges in the field of copper chalcogenide NCs and give a perspective for further research. We believe that this review provides a timely and concise summary of the field of plasmonic copper chalcogenide NCs for the benefit and inspiration of its rapid and formulated development.
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| 10. |
- Ye, Chao, et al.
(författare)
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Comprehensive understanding of Saccharomyces cerevisiae phenotypes with whole-cell model WM_S288C
- 2020
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Ingår i: Biotechnology and Bioengineering. - : Wiley. - 0006-3592 .- 1097-0290. ; 117:5, s. 1562-1574
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Tidskriftsartikel (refereegranskat)abstract
- Biological network construction for Saccharomyces cerevisiae is a widely used approach for simulating phenotypes and designing cell factories. However, due to a complicated regulatory mechanism governing the translation of genotype to phenotype, precise prediction of phenotypes remains challenging. Here, we present WM_S288C, a computational whole-cell model that includes 15 cellular states and 26 cellular processes and which enables integrated analyses of physiological functions of Saccharomyces cerevisiae. Using WM_S288C to predict phenotypes of S. cerevisiae, the functions of 1140 essential genes were characterized and linked to phenotypes at five levels. During the cell cycle, the dynamic allocation of intracellular molecules could be tracked in real-time to simulate cell activities. Additionally, one-third of non-essential genes were identified to affect cell growth via regulating nucleotide concentrations. These results demonstrated the value of WM_S288C as a tool for understanding and investigating the phenotypes of S. cerevisiae.
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