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1.	Abrahamsson, K, et al. (författare) Marine algae - a source of trichloroethylene and perchloroethylene 1995 Ingår i: Limnology and Oceanography. - 0024-3590 .- 1939-5590. ; 40:7, s. 1321-1326 Tidskriftsartikel (refereegranskat)abstract Our results show the natural production of two olefins, trichloroethylene and perchloroethylene, by various marine macroalgae and a microalga. We found significant difference in the ability of the algae to produce these compounds. The production rates for trichloroethylenevaried between 0.022 and 3,400 ng g-l fresh wt (FW)h-l and were generally higher than those for perchloroethylene(0.0026-8.2 ng g-l FW h-l). The two subtropicalalgae, Asparagopsis taxiformis and Falkenbergia hillebrandii,showed the highest formation rates. One axenicmarine red microalga, Porphyridium purpureum, was alsotested and it could also produce trichloroethylene and perchloroethylene.The measured rates suggest that the emissionof trichloroethylene and perchloroethylene from theoceans to the atmosphere may be of such a magnitude thatit cannot be neglected in the global atmospheric chlorinebudget.
2.	Adrian, Rita, et al. (författare) Lakes as sentinels of climate change 2009 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 54:6(2), s. 2283-2297 Tidskriftsartikel (refereegranskat)abstract While there is a general sense that lakes can act as sentinels of climate change, their efficacy has not been thoroughly analyzed. We identified the key response variables within a lake that act as indicators of the effects of climate change on both the lake and the catchment. These variables reflect a wide range of physical, chemical, and biological responses to climate. However, the efficacy of the different indicators is affected by regional response to climate change, characteristics of the catchment, and lake mixing regimes. Thus, particular indicators or combinations of indicators are more effective for different lake types and geographic regions. The extraction of climate signals can be further complicated by the influence of other environmental changes, such as eutrophication or acidification, and the equivalent reverse phenomena, in addition to other land-use influences. In many cases, however, confounding factors can be addressed through analytical tools such as detrending or filtering. Lakes are effective sentinels for climate change because they are sensitive to climate, respond rapidly to change, and integrate information about changes in the catchment.
3.	Ahlgren, Joakim, et al. (författare) Degradation of organic phosphorus compounds in anoxic Baltic Sea sediments : A P-31 nuclear magnetic resonance study 2006 Ingår i: Limnology and Oceanography. - Uppsala Univ, Dept Ecol & Evolut, Evolutionary Biol Ctr, S-75236 Uppsala, Sweden. Uppsala Univ, Dept Chem, S-75124 Uppsala, Sweden. Univ So Denmark, Inst Biol, DK-5230 Odense, Denmark.. - 0024-3590 .- 1939-5590. ; 51:5, s. 2341-2348 Tidskriftsartikel (refereegranskat)abstract The composition and abundance of phosphorus extracted by NaOH-ethylenediaminetetraacetic acid from anoxic Northwest Baltic Sea sediment was characterized and quantified using solution P-31 nuclear magnetic resonance. Extracts from sediment depths down to 55 cm, representing 85 yr of deposition, contained 18.5 g m(-2) orthophosphate. Orthophosphate monoesters, teichoic acid P, microbial P lipids, DNA P, and pyrophosphate corresponded to 6.7, 0.3, 1.1, 3.0, and 0.03 g P m(-2), respectively. The degradability of these compound groups was estimated by their decline in concentration with sediment depth. Pyrophosphate had the shortest half-life (3 yr), followed by microbial P lipids with a half-life of 5 yr, DNA P (8 yr), and orthophosphate monoesters (16 yr). No decline in concentration with sediment depth was observed for orthophosphate or teichoic acid P.
4.	Aho, Kelly S., et al. (författare) Distinct concentration-discharge dynamics in temperate streams and rivers : CO2 exhibits chemostasis while CH4 exhibits source limitation due to temperature control 2021 Ingår i: Limnology and Oceanography. - : John Wiley & Sons. - 0024-3590 .- 1939-5590. ; 66:10, s. 3656-3668 Tidskriftsartikel (refereegranskat)abstract Streams and rivers are significant sources of carbon dioxide (CO2) and methane (CH4) to the atmosphere. However, the magnitudes of these fluxes are uncertain, in part, because dissolved greenhouse gases (GHGs) can exhibit high spatiotemporal variability. Concentration-discharge (C-Q) relationships are commonly used to describe temporal variability stemming from hydrologic controls on solute production and transport. This study assesses how the partial pressures of two GHGs—pCO2 and pCH4—vary across hydrologic conditions over 4 yr in eight nested streams and rivers, at both annual and seasonal timescales. Overall, the range of pCO2 was constrained, ranging from undersaturated to nine times oversaturated, while pCH4 was highly variable, ranging from 3 to 500 times oversaturated. We show that pCO2 exhibited chemostatic behavior (i.e., no change with Q), in part, due to carbonate buffering and seasonally specific storm responses. In contrast, we show that pCH4 generally exhibited source limitation (i.e., a negative relationship with Q), which we attribute to temperature-mediated production. However, pCH4 exhibited chemostasis in a wetland-draining stream, likely due to hydrologic connection to the CH4-rich wetland. These findings have implications for CO2 and CH4 fluxes, which are controlled by concentrations and gas transfer velocities. At high Q, enhanced gas transfer velocity acts on a relatively constant CO2 stock but on a diminishing CH4 stock. In other words, CO2 fluxes increase with Q, while CH4 fluxes are modulated by the divergent Q dynamics of gas transfer velocity and concentration.
5.	Albert, Séréna, et al. (författare) Influence of settling organic matter quantity and quality on benthic nitrogen cycling 2021 Ingår i: Limnology and Oceanography. - : Wiley. - 1939-5590 .- 0024-3590. ; 66:5, s. 1882-1895 Tidskriftsartikel (refereegranskat)abstract Coastal sediments are major contributors to global carbon (C) mineralization and nutrient cycling and are tightly linked to processes in the pelagic environment. In this study, we aimed to investigate the regulating potential of quantity and quality of planktonic organic matter (OM) deposition on benthic metabolism, with a particular focus on nitrogen (N) cycling processes. We simulated inputs of spring (C : N 10.9) and summer (C : N 5.6) plankton communities in high and low quantities to sediment cores, and followed oxygen consumption, nutrient fluxes as well as nitrate reduction rates, that is, denitrification and dissimilatory nitrate reduction to ammonium for 10 d. Our results demonstrate the primary importance of OM quality in determining the fate of organic N once it settles to the sediment surface. Settling of N-rich summer plankton material resulted in a ∼ twofold lower denitrification efficiency (40–56%) compared to N-poor spring plankton (88–115%). This indicates that N-rich plankton deposition favors recycling of inorganic nutrients to the water column over N-loss via denitrification. OM quantity was positively related to mineralization activity, but this neither directly affected N fluxes nor denitrification activity, highlighting the complex interplay between the OM quantity and quality in regulating N cycling. In light of these new findings, we support the use of simple qualitative indicators such as C : N ratio of OM to investigate how future changes in benthic-pelagic coupling might influence N budgets at the sediment–water interface.
6.	Allesson, Lina, et al. (författare) The role of photomineralization for CO2 emissions in boreal lakes along a gradient of dissolved organic matter 2021 Ingår i: Limnology and Oceanography. - : John Wiley & Sons. - 0024-3590 .- 1939-5590. ; 66:1, s. 158-170 Tidskriftsartikel (refereegranskat)abstract Many boreal lakes are experiencing an increase in concentrations of terrestrially derived dissolved organic matter (DOM)-a process commonly labeled "browning." Browning affects microbial and photochemical mineralization of DOM, and causes increased light attenuation and hence reduced photosynthesis. Consequently, browning regulates lake heterotrophy and net CO2-efflux to the atmosphere. Climate and environmental change makes ecological forecasting and global carbon cycle modeling increasingly important. A proper understanding of the magnitude and relative contribution from CO2-generating processes for lakes ranging in dissolve organic carbon (DOC) concentrations is therefore crucial for constraining models and forecasts. Here, we aim to study the relative contribution of photomineralization to total CO(2)production in 70 Scandinavian lakes along an ecosystem gradient of DOC concentration. We combined spectral data from the lakes with regression estimates between optical parameters and wavelength specific photochemical reactivity to estimate rates of photochemical DOC mineralization. Further, we estimated total in-lake CO2-production and efflux from lake chemical and physical data. Photochemical mineralization corresponded on average to 9% +/- 1% of the total CO2-evasion, with the highest contribution in clear lakes. The calculated relative contribution of photochemical mineralization to total in-lake CO2-production was about 3% +/- 0.2% in all lakes. Although lakes differed substantially in color, depth-integrated photomineralization estimates were similar in all lakes, regardless of DOC concentrations. DOC concentrations were positively related to CO2-efflux and total in-lake CO2-production but negatively related to primary production. We conclude that enhanced rates of photochemical mineralization will be a minor contributor to increased heterotrophy under increased browning.
7.	Alling, Vanja, et al. (författare) Tracing terrestrial organic matter by delta S-34 and delta C-13 signatures in a subarctic estuary 2008 Ingår i: Limnology and Oceanography. - 0024-3590 .- 1939-5590. ; 53:6, s. 2594-2602 Tidskriftsartikel (refereegranskat)abstract A key issue to understanding the transformations of terrestrial organic carbon in the ocean is to disentangle the latter from marine-produced organic matter. We applied a multiple stable isotope approach using delta S-34 and delta C-13 isotope signatures from estuarine dissolved organic matter (DOM), enabling us to constrain the contribution of terrestrial-derived DOM in an estuarine gradient of the northern Baltic Sea. The stable isotope signatures for dissolved organic sulfur (delta S-34(DOS)) have twice the range between terrestrial and marine end members compared to the stable isotope signatures for dissolved organic carbon (delta C-13(DOC)); hence, the share of terrestrial DOM in the total estuarine DOM can be calculated more precisely. DOM samples from the water column were collected using ultrafiltration on board the German RV Maria S Merian during a winter cruise, in the Bothnian Bay, Bothnian Sea, and Baltic proper. We calculated the terrestrial fraction of the estuarine DOC (DOCter) from both delta C-13(DOC) and delta S-34(DOS) signatures and applying fixed C: S ratios for riverine and marine end members to convert S isotope signatures into DOC concentrations. The delta S-34(DOS) signature of the riverine end member was +7.02 parts per thousand, and the mean signatures from Bothnian Bay, Bothnian Sea, and Baltic proper were +10.27, +12.51, and +13.67 parts per thousand, respectively, showing an increasing marine signal southwards (d34SDOS marine end member = 18.1 parts per thousand). These signatures indicate that 87%, 75%, and 67%, respectively, of the water column DOC is of terrestrial origin (DOCter) in these basins. Comparing the fractions of DOCter in each basin-that are still based on few winter values only-with the annual river input of DOC, it appears that the turnover time for DOCter in the Gulf of Bothnia is much shorter than the hydraulic turnover time, suggesting that high-latitude estuaries might be efficient sinks for DOCter.
8.	Alling, Vanja, 1978-, et al. (författare) Tracing terrestrial organic matter by delta34S and delta13C signatures in a subarctic estuary 2008 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 53:6, s. 2594-2602 Tidskriftsartikel (refereegranskat)abstract A key issue to understanding the transformations of terrestrial organic carbon in the ocean is to disentangle the latter from marine-produced organic matter. We applied a multiple stable isotope approach using 34S and 13C isotope signatures from estuarine dissolved organic matter (DOM), enabling us to constrain the contribution of terrestrial-derived DOM in an estuarine gradient of the northern Baltic Sea. The stable isotope signatures for dissolved organic sulfur (34SDOS) have twice the range between terrestrial and marine end members compared to the stable isotope signatures for dissolved organic carbon (13CDOC); hence, the share of terrestrial DOM in the total estuarine DOM can be calculated more precisely. DOM samples from the water column were collected using ultrafiltration on board the German RV Maria S Merian during a winter cruise, in the Bothnian Bay, Bothnian Sea, and Baltic proper. We calculated the terrestrial fraction of the estuarine DOC (DOCter) from both 13CDOC and 34SDOS signatures and applying fixed C: S ratios for riverine and marine end members to convert S isotope signatures into DOC concentrations. The 34SDOS signature of the riverine end member was +7.02‰, and the mean signatures from Bothnian Bay, Bothnian Sea, and Baltic proper were +10.27, +12.51, and +13.67‰, respectively, showing an increasing marine signal southwards (34SDOS marine end member 5 18.1‰). These signatures indicate that 87‰, 75‰, and 67‰, respectively, of the water column DOC is of terrestrial origin (DOCter) in these basins. Comparing the fractions of DOCter in each basin—that are still based on few winter values only—with the annual river input of DOC, it appears that the turnover time for DOCter in the Gulf of Bothnia is much shorter than the hydraulic turnover time, suggesting that high-latitude estuaries might be efficient sinks for DOCter.
9.	Andersson, Björn, 1985, et al. (författare) Nitrogen fixation in shallow-water sediments: Spatial distribution and controlling factors 2014 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 59:6, s. 1932-1944 Tidskriftsartikel (refereegranskat)abstract Nitrogenase activity (NA) in shallow-water (< 1 m) sediments was investigated at 60 randomly selected sites along a 150 km stretch on the brackish-water Swedish west coast, without targeting any specific type of sediments, such as microbial mats. Benthic nitrogen (N) fixation and diazotrophs (nifH genes) were found at all sites, regardless of the presence of cyanobacterial or microbial mats. The majority of sites showed N fixation rates between 0.03 and 1 mmol N m−2 d−1. These rates were similar to those of benthic denitrification previously measured in the area. Maximum rates up to 3.4 mmol N m−2 d−1 were measured. A structural equation model was used to investigate direct and indirect effects of biogeochemical and physical factors on NA. Number of nifH genes had the largest direct positive influence on NA, whereas increasing wave exposure had an indirect negative effect on NA through its influence on the diazotrophic abundance. Increased salinity, previously been shown to suppress NA in coastal waters, was found to directly stimulate benthic N fixation, likely by generating favorable conditions for diazotrophic sulfate-reducing bacteria. Our field data confirmed previously observed negative effects of dissolved inorganic nitrogen on NA, which have so far mainly been experimentally studied. Both NA rates and the number of nifH genes correlated positively with pore-water dissolved inorganic phosphorus concentrations. These findings show that the potential for N fixation in illuminated sediments can be considerable, stretching beyond cyanobacterial mats, being controlled by complex interactions between biotic and abiotic factors.
10.	Angeler, David, et al. (författare) Effects of trophic status, water level, and temperature on shallow lake metabolism and metabolic balance: A standardized pan-European mesocosm experiment 2019 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 64, s. 616-631 Tidskriftsartikel (refereegranskat)abstract Important drivers of gross primary production (GPP) and ecosystem respiration (ER) in lakes are temperature, nutrients, and light availability, which are predicted to be affected by climate change. Little is known about how these three factors jointly influence shallow lakes metabolism and metabolic status as net heterotrophic or autotrophic. We conducted a pan-European standardized mesocosm experiment covering a temperature gradient from Sweden to Greece to test the differential temperature sensitivity of GPP and ER at two nutrient levels (mesotrophic or eutrophic) crossed with two water levels (1 m and 2 m) to simulate different light regimes. The findings from our experiment were compared with predictions made according the metabolic theory of ecology (MTE). GPP and ER were significantly higher in eutrophic mesocosms than in mesotrophic ones, and in shallow mesocosms compared to deep ones, while nutrient status and depth did not interact. The estimated temperature gains for ER of similar to 0.62 eV were comparable with those predicted by MTE. Temperature sensitivity for GPP was slightly higher than expected similar to 0.54 eV, but when corrected for daylight length, it was more consistent with predictions from MTE similar to 0.31 eV. The threshold temperature for the switch from autotrophy to heterotrophy was lower under mesotrophic (similar to 11 degrees C) than eutrophic conditions (similar to 20 degrees C). Therefore, despite a lack of significant temperature-treatment interactions in driving metabolism, the mesocosm's nutrient level proved to be crucial for how much warming a system can tolerate before it switches from net autotrophy to net heterotrophy.
11.	Ask, Jenny, 1976-, et al. (författare) Terrestrial organic matter and light penetration : Effects on bacterial and primary production in lakes 2009 Ingår i: Limnology and Oceanography. - : American Society of Limnology and Oceanography, Inc.. - 0024-3590 .- 1939-5590. ; 54:6, s. 2034-2040 Tidskriftsartikel (refereegranskat)abstract We investigated productivity at the basal trophic level in 15 unproductive lakes in a gradient ranging from clear-water to brown-water (humic) lakes in northern Sweden. Primary production and bacterial production in benthic and pelagic habitats were measured to estimate the variation in energy mobilization from external energy sources (primary production plus bacterial production on allochthonous organic carbon) along the gradient. Clear-water lakes were dominated by autotrophic energy mobilization in the benthic habitat, whereas humic lakes were dominated by heterotrophic energy mobilization in the pelagic habitat. Whole-lake (benthic + pelagic) energy mobilization was negatively correlated to the light-extinction coefficient, which was determined by colored terrestrial organic matter in the lake water. Thus, variation in the concentration of terrestrial organic matter and its light-absorbing characteristics exerts strong control on the magnitude, as well as on the processes and pathways, of energy mobilization in unproductive lakes. We suggest that unproductive lakes in general are sensitive to input of terrestrial organic matter because of its effects on basal energy mobilization in both benthic and pelagic habitats.
12.	Asmala, Eero, et al. (författare) A reply to the comment by Karlsson et al. 2019 Ingår i: Limnology and Oceanography. - : Wiley. - 1939-5590 .- 0024-3590. ; 64:4, s. 1832-1833 Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
13.	Asmala, Eero, et al. (författare) Efficiency of the coastal filter : Nitrogen and phosphorus removal in the Baltic Sea 2017 Ingår i: Limnology and Oceanography. - : Wiley. - 1939-5590 .- 0024-3590. ; 62, s. 222-238 Tidskriftsartikel (refereegranskat)abstract An important function of coastal ecosystems is the reduction of the nutrient flux from land to the open sea, the coastal filter. In this study, we focused on the two most important coastal biogeochemical processes that remove nitrogen and phosphorus permanently: denitrification and phosphorus burial. We compiled removal rates from coastal systems around the Baltic Sea and analyzed their spatial variation and regulating environmental factors. These analyses were used to scale up denitrification and phosphorus burial rates for the entire Baltic Sea coastal zone. Denitrification rates ranged from non-detectable to 12 mmol N m−2 d−1, and correlated positively with both bottom water nitrate concentration and sediment organic carbon content. The rates exhibited a strong decreasing gradient from land to the open coast, which was likely driven by the availability of nitrate and labile organic carbon, but a high proportion of non-cohesive sediments in the coastal zone decreased the denitrification efficiency relative to the open sea. Phosphorus burial rates varied from 0.21 g P m−2 yr−1 in open coastal systems to 2.28 g P m−2 yr−1 in estuaries. Our analysis suggests that archipelagos are important phosphorus traps and account for 45% of the coastal P removal, while covering only 17% of the coastal areas. High burial rates could partly be sustained by phosphorus import from the open Baltic Sea. We estimate that the coastal filter in the Baltic Sea removes 16% of nitrogen and 53% of phosphorus inputs from land.
14.	Attard, K. M., et al. (författare) Seasonal metabolism and carbon export potential of a key coastal habitat : The perennial canopy-forming macroalga Fucus vesiculosus 2019 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 64:1, s. 149-164 Tidskriftsartikel (refereegranskat)abstract The important role of macroalgal canopies in the oceanic carbon (C) cycle is increasingly being recognized, but direct assessments of community productivity remain scarce. We conducted a seasonal study on a sublittoral Baltic Sea canopy of the brown alga Fucus vesiculosus, a prominent species in temperate and Arctic waters. We investigated community production on hourly, daily, and seasonal timescales. Aquatic eddy covariance (AEC) oxygen flux measurements integrated similar to 40 m(2) of the seabed surface area and documented considerable oxygen production by the canopy year-round. High net oxygen production rates of up to 35 +/- 9 mmol m(-2) h(-1) were measured under peak irradiance of similar to 1200 mu mol photosynthetically active radiation (PAR) m(-2) s(-1) in summer. However, high rates > 15 mmol m(-2) h(-1) were also measured in late winter (March) under low light intensities < 250 mu mol PAR m(-2) s(-1) and water temperatures of similar to 1 degrees C. In some cases, hourly AEC fluxes documented an apparent release of oxygen by the canopy under dark conditions, which may be due to gas storage dynamics within internal air spaces of F. vesiculosus. Daily net ecosystem metabolism (NEM) was positive (net autotrophic) in all but one of the five measurement campaigns (December). A simple regression model predicted a net autotrophic canopy for two-thirds of the year, and annual canopy NEM amounted to 25 mol O-2 m(-2) yr(-1), approximately six-fold higher than net phytoplankton production. Canopy C export was similar to 0.3 kg C m(-2) yr(-1), comparable to canopy standing biomass in summer. Macroalgal canopies thus represent regions of intensified C assimilation and export in coastal waters.
15.	Attermeyer, Katrin, et al. (författare) Potential terrestrial influence on transparent exopolymer particle (TEP) concentrations in boreal freshwaters 2019 Ingår i: Journal of limnology. - : Wiley. - 1129-5767 .- 1723-8633. ; 64:6, s. 2455-2466 Tidskriftsartikel (refereegranskat)abstract Transparent exopolymer particles (TEP) are ubiquitous in aquatic ecosystems and contribute, for example, to sedimentation of organic matter in oceans and freshwaters. Earlier studies indicate that the formation of TEP is related to the in situ activity of phytoplankton or bacteria. However, terrestrial sources of TEP and TEP precursors are usually not considered. We investigated TEP concentration and its driving factors in boreal freshwaters, hypoth- esizing that TEP and TEP precursors can enter freshwaters via terrestrial inputs. In a field survey, we measured TEP concentrations and other environmental factors across 30 aquatic ecosystems in Sweden. In a mesocosm experi- ment, we further investigated TEP dynamics over time after manipulating terrestrial organic matter input and light conditions. The TEP concentrations in boreal freshwaters ranged from 83 to 4940 μg Gum Xanthan equivalent L−1, which is comparable to other studies in freshwaters. The carbon fraction in TEP in the sampled boreal freshwaters is much higher than the phytoplanktonic carbon, in contrast to previous studies in northern temperate and Medi- terranean regions. Boreal TEP concentrations were mostly related to particulate organic carbon, dissolved organic carbon, and optical indices of terrestrial influence but less influenced by bacterial abundance, bacterial production, and chlorophyll a. Hence, our results do not support a major role of the phytoplankton community or aquatic bac- teria on TEP concentrations and dynamics. This suggests a strong external control of TEP concentrations in boreal freshwaters, which can in turn affect particle dynamics and sedimentation in the recipient aquatic ecosystem.
16.	Balmonte, John Paul, et al. (författare) A sea change in microbial enzymes : Heterogeneous latitudinal and depth-related gradients in bulk water and particle-associated enzymatic activities from 30 degrees S to 59 degrees N in the Pacific Ocean 2021 Ingår i: Limnology and Oceanography. - : John Wiley & Sons. - 0024-3590 .- 1939-5590. ; 66:9, s. 3489-3507 Tidskriftsartikel (refereegranskat)abstract Heterotrophic microbes initiate the degradation of high molecular weight organic matter using extracellular enzymes. Our understanding of differences in microbial enzymatic capabilities, especially among particle-associated taxa and in the deep ocean, is limited by a paucity of hydrolytic enzyme activity measurements. Here, we measured the activities of a broad range of hydrolytic enzymes (glucosidases, peptidases, polysaccharide hydrolases) in epipelagic to bathypelagic bulk water (nonsize-fractionated), and on particles (>= 3 mu m) along a 9800 km latitudinal transect from 30 degrees S in the South Pacific to 59 degrees N in the Bering Sea. Individual enzyme activities showed heterogeneous latitudinal and depth-related patterns, with varying biotic and abiotic correlates. With increasing latitude and decreasing temperature, lower laminarinase activities sharply contrasted with higher leucine aminopeptidase (leu-AMP) and chondroitin sulfate hydrolase activities in bulk water. Endopeptidases (chymotrypsins, trypsins) exhibited patchy spatial patterns, and their activities can exceed rates of the widely measured exopeptidase, leu-AMP. Compared to bulk water, particle-associated enzymatic profiles featured a greater relative importance of endopeptidases, as well as a broader spectrum of polysaccharide hydrolases in some locations, and latitudinal and depth-related trends that are likely consequences of varying particle fluxes. As water depth increased, enzymatic spectra on particles and in bulk water became narrower, and diverged more from one another. These distinct latitudinal and depth-related gradients of enzymatic activities underscore the biogeochemical consequences of emerging global patterns of microbial community structure and function, from surface to deep waters, and among particle-associated taxa.
17.	Balmonte, John Paul, et al. (författare) Sharp contrasts between freshwater and marine microbial enzymatic capabilities, community composition, and DOM pools in a NE Greenland fjord 2020 Ingår i: Limnology and Oceanography. - : WILEY. - 0024-3590 .- 1939-5590. ; 65:1, s. 77-95 Tidskriftsartikel (refereegranskat)abstract Increasing glacial discharge can lower salinity and alter organic matter (OM) supply in fjords, but assessing the biogeochemical effects of enhanced freshwater fluxes requires understanding of microbial interactions with OM across salinity gradients. Here, we examined microbial enzymatic capabilities-in bulk waters (nonsize-fractionated) and on particles (>= 1.6 mu m)-to hydrolyze common OM constituents (peptides, glucose, polysaccharides) along a freshwater-marine continuum within Tyrolerfjord-Young Sound. Bulk peptidase activities were up to 15-fold higher in the fjord than in glacial rivers, whereas bulk glucosidase activities in rivers were twofold greater, despite fourfold lower cell counts. Particle-associated glucosidase activities showed similar trends by salinity, but particle-associated peptidase activities were up to fivefold higher-or, for several peptidases, only detectable-in the fjord. Bulk polysaccharide hydrolase activities also exhibited freshwater-marine contrasts: xylan hydrolysis rates were fivefold higher in rivers, while chondroitin hydrolysis rates were 30-fold greater in the fjord. Contrasting enzymatic patterns paralleled variations in bacterial community structure, with most robust compositional shifts in river-to-fjord transitions, signifying a taxonomic and genetic basis for functional differences in freshwater and marine waters. However, distinct dissolved organic matter (DOM) pools across the salinity gradient, as well as a positive relationship between several enzymatic activities and DOM compounds, indicate that DOM supply exerts a more proximate control on microbial activities. Thus, differing microbial enzymatic capabilities, community structure, and DOM composition-interwoven with salinity and water mass origins-suggest that increased meltwater may alter OM retention and processing in fjords, changing the pool of OM supplied to coastal Arctic microbial communities.
18.	Baltar, Federico, et al. (författare) Evidence of prokaryotic metabolism on suspended particulate organic matter in the dark waters of the (sub)tropical North Atlantic 2009 Ingår i: Limnology and Oceanography. - 0024-3590 .- 1939-5590. ; 54:1, s. 182-193 Tidskriftsartikel (refereegranskat)abstract The distribution of prokaryotic abundance (PA), respiratory activity (ETS), heterotrophic production (PHP), and suspended particulate (POM) and dissolved (DOM) organic matter was determined in the meso- and bathypelagic waters of the (sub) tropical North Atlantic. PA decreased by one order of magnitude from the lower euphotic zone to the bathypelagic waters, while ETS decreased by two and PHP by three orders of magnitude. On a section following the Mid-Atlantic Ridge from 35 degrees N to 5 degrees N, ETS below 1000-m depth increased southwards up to three-fold. This latitudinal gradient in the deep waters was paralleled by a six-fold increase in Particulate Organic Carbon (POC), whereas no trend was apparent in the DOM distribution. Significant correlations between POM and ETS were obtained in the water masses between 1000-m and 3000-m depth, the Antarctic Intermediate Water and the North East Atlantic Deep Water. A strong imbalance in the dark ocean was found between prokaryotic carbon demand (estimated through two different approaches) and the carbon sinking flux derived from sediment-trap records corrected with Th-230. The imbalance was greater when deeper in the water column, suggesting that the suspended carbon pool must account for most of the carbon deficit. Our results, together with other recent findings discussed in this paper, indicate that microbial life in the dark ocean is likely more dependent on slowly sinking or buoyant, laterally advected suspended particles than hitherto assumed.
19.	Bastviken, David, et al. (författare) Degradation of dissolved organic matter in oxic and anoxic lake water 2004 Ingår i: Limnology and Oceanography. - : John Wiley & Sons. - 0024-3590 .- 1939-5590. ; 49:1, s. 109–116- Tidskriftsartikel (refereegranskat)abstract Decades of conflicting results have fueled a debate about how O-2 affects organic matter (OM) degradation and carbon cycling. In a laboratory study, using both OM taken directly from a humic lake and chemically isolated fulvic acid, we monitored the mineralization of dissolved OM in freshwater under purely oxic and anoxic conditions, under oxic then anoxic conditions, and under anoxic then oxic conditions, for 426 d. Between 5% and 24% of the initial OM was mineralized, with most extensive mineralization occurring under purely oxic and anoxic-oxic conditions. A sequential change in the O-2 regime did not result in greater overall degradation, but initially anoxic conditions favored subsequent oxic mineralization. A substantially greater fraction of the OM was degraded than in previous shorter studies, with as much as 50% of the total OM degradation occurring after 147 d into the experiment. Three fractions of the degradable OM were identified: OM degraded only under oxic conditions (68-78%), OM degraded more rapidly under anoxic conditions than under oxic conditions (16-18%), and OM degraded at equal rates under both oxic and anoxic conditions (6-14%). The degradation patterns of natural dissolved OM from a humic lake and chemically isolated fulvic acid were very similar, which indicates a similar level of bioavailability. The difference between anoxic and oxic degradation was greater in our long-term studies than in previous short-term experiments, which indicates that the oxic and anoxic degradation potentials vary with increasing overall OM recalcitrance and that similar oxic and anoxic degradation rates can be expected in short-term experiments in which <30% of the long-term degradable OM is allowed to decompose.
20.	Beier, Sara, et al. (författare) Uncoupling of chitinase activity and uptake of hydrolyses products in freshwater bacterioplankton 2011 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 56:4, s. 1179-1188 Tidskriftsartikel (refereegranskat)abstract We investigated to what extent chitinolytic bacteria subsidize bacterial populations that do not produce chitinolytic enzymes but still use the products of chitin hydrolysis. Applying single-cell techniques to untreated and chitin-enriched lake water, we show that the number of planktonic cells taking up chitin hydrolysis products by far exceeds the number of cells expressing chitinases. Flavobacteria, Actinobacteria, and specifically members of the abundant and ubiquitous freshwater Ac1 cluster of the Actinobacteria, increased in abundance and were enriched in response to the chitin amendment. Flavobacteria were frequently observed in dense clusters on chitin particles, suggesting that they are actively involved in the hydrolysis and solubilization of chitin. In contrast, Actinobacteria were exclusively planktonic. We propose that planktonic Actinobacteria contain commensals specialized in the uptake of small hydrolysis products without expressing or possibly even possessing the machinery for chitin hydrolysis. More research is needed to assess the importance of such "cheater'' substrate acquisition strategies in the turnover and degradation of polymeric organic matter in aquatic ecosystems.
21.	Bengtsson, Lars, et al. (författare) Field investigation of winter thermo‐ and hydrodynamics in a small Karelian lake 1996 Ingår i: Limnology and Oceanography. - : Wiley. - 1939-5590 .- 0024-3590. ; 41:7, s. 1502-1502 Tidskriftsartikel (refereegranskat)abstract During late winter (18 March–7 April 1994), temperature and current measurements were made in Lake Vendyurskoe, Russia, including three surveys at six cross sections of the lake. Also, the temperature profile evolution was registered with two thermistor chains at two stations (bottom depths of 7.6 and 11.5 m) until the time of ice breakup. Temperature gradients were measured just below the ice cover and in the upper 10‐cm layer of the bottom sediments.The isotherms were found to be almost horizontal and evenly spaced vertically, so no conditions for large‐scale, density‐induced currents existed. The heat flux from sediments to water ranged from 0.6 to 2.0 W m−2. These values were inversely related to the depth. The heat flux from water to ice ranged from 0.7 to 1.2 W m−2. When water heating from solar radiation penetration became apparent, this flux increased by a factor of two. When solar radiation increased, convection occurred in the upper layers of the water column. When solar radiation heating became significant at the beginning of spring, the average net heat flux at the ice‐water interface during daytime was 7.7 W m−2. Weak currents (few mm s−1) with a seiche‐like character were observed, which most likely resulted from ice‐cover oscillations.
22.	Berggren, Martin, 1981-, et al. (författare) Aging of allochthonous organic carbon regulates bacterial production in unproductive boreal lakes 2009 Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 54:4, s. 1333-1342 Tidskriftsartikel (refereegranskat)abstract We calculated average aquatic dissolved organic carbon (DOC) age (the time span from soil discharge to observation) in water from the inlets and outlets of two unproductive Swedish lakes at different times during an annual cycle. Bacterial production (BP) and bacterial growth efficiency (BGE) determined during 7-d bioassays decreased with increasing average aquatic DOC age. Parallel to the declines in BP and BGE there was a rise in specific ultraviolet absorbance at the wavelength of 254 nm (SUVA254), which indicates that decreasing BP and BGE were connected to a shift to a more aromatic and recalcitrant DOC pool. The relationships between bacterial metabolism and DOC age were stronger after a Q10 correction of the DOC age, showing that temperature affected rates of DOC quality changes over time and should be taken into account when relating lake bacterial growth to substrate aging in natural environments. We propose that hydrological variability in combination with lake size (water renewal time) have a large influence on pelagic BP in lakes with high input of terrigenous DOC.
23.	Berggren, Martin, et al. (författare) Nutrient limitation masks the dissolved organic matter composition effects on bacterial metabolism in unproductive freshwaters 2023 Ingår i: Limnology and Oceanography. - : John Wiley & Sons. - 0024-3590 .- 1939-5590. ; 68:9, s. 2059-2069 Tidskriftsartikel (refereegranskat)abstract Aquatic microbial responses to changes in the amount and composition of dissolved organic carbon (DOC) are of fundamental ecological and biogeochemical importance. Parallel factor (PARAFAC) analysis of excitation–emission fluorescence spectra is a common tool to characterize DOC, yet its ability to predict bacterial production (BP), bacterial respiration (BR), and bacterial growth efficiency (BGE) vary widely, potentially because inorganic nutrient limitation decouples microbial processes from their dependence on DOC composition. We used 28-d bioassays with water from 19 lakes, streams, and rivers in northern Sweden to test how much the links between bacterial metabolism and fluorescence PARAFAC components depend on experimental additions of inorganic nutrients. We found a significant interaction effect between nutrient addition and fluorescence on carbon-specific BP, and weak evidence for influence on BGE by the same interaction (p = 0.1), but no corresponding interaction effect on BR. A practical implication of this interaction was that fluorescence components could explain more than twice as much of the variability in carbon-specific BP (R2 = 0.90) and BGE (R2 = 0.70) after nitrogen and phosphorus addition, compared with control incubations. Our results suggest that an increased supply of labile DOC relative to ambient phosphorus and nitrogen induces gradually larger degrees of nutrient limitation of BP, which in turn decouple BP and BGE from fluorescence signals. Thus, while fluorescence does contain precise information about the degree to which DOC can support microbial processes, this information may be hidden in field studies due to nutrient limitation of bacterial metabolism.
24.	Berggren, Martin, et al. (författare) Systematic microbial production of optically active dissolved organic matter in subarctic lake water 2020 Ingår i: Limnology and Oceanography. - : Association for the Sciences of Limnology and Oceanography (ASLO). - 0024-3590 .- 1939-5590. ; 65:5 Tidskriftsartikel (refereegranskat)abstract The ecology and biogeochemistry of lakes in the subarctic region are particularly sensitive to changes in the abundance and optical properties of dissolved organic matter (DOM). External input of colored DOM to these lakes is an extensively researched topic, but little is known about potential reciprocal feedbacks between the optical properties of DOM and internal microbial processes in the water. We performed 28-day dark laboratory incubation trials on water from 101 subarctic tundra lakes in northern Sweden, measuring the microbial decay of DOM and the resulting dynamics in colored (CDOM) and fluorescent (FDOM) DOM components. While losses in dissolved oxygen during the incubations corresponded to a 20% decrease in mean DOM, conversely the mean CDOM and total FDOM increased by 22% and 30%, respectively. However, the patterns in microbial transformation of the DOM were not the same in all lakes. Notably, along the gradient of increasing ambient CDOM (water brownness), the lakes showed decreased microbial production of protein-like fluorescence, lowered DOM turnover rates and decreasing bacterial growth per unit of DOM. These trends indicate that browning of subarctic lakes systematically change the way that bacteria interact with the ambient DOM pool. Our study underscores that there is no unidirectional causal link between microbial processes and DOM optical properties, but rather reciprocal dependence between the two.
25.	Berggren, M., et al. (författare) Terrestrial support of zooplankton biomass in northern rivers 2018 Ingår i: Limnology and Oceanography. - : John Wiley & Sons. - 0024-3590 .- 1939-5590. ; 63:6, s. 2479-2492 Tidskriftsartikel (refereegranskat)abstract The contribution of terrestrially derived carbon to micro-crustacean zooplankton biomass (i.e., allochthony) has been previously studied in lakes, reservoirs, and estuaries, but little is known about zooplankton allochthony in rivers. In lacustrine environments, allochthony is regulated by distinct selective feeding behavior of different taxa. However, we hypothesized that restricted possibility for selective grazing in turbulent environments such as rivers would decouple zooplankton from specific microbial and algal food resources, such that their allochthony would mirror the terrestrial contribution to the surrounding bulk particle pool. We tested this idea by analyzing allochthony in 13 widely distributed Swedish rivers, using a dual-isotope mixing model. Zooplankton biomasses were generally low, and allochthony in different micro-crustacean groups (Cladocera, Cyclopoida, Calanoida) varied from 2% to 77%. As predicted, there were no correlations between allochthony and variables indicating the supply of algal and microbial food resources, such as chlorophyll a and bacterial production. Instead, the allochthony was generally similar to the share allochthonous contribution in bulk particulate organic matter, with relationships close to the 1 : 1 line. The zooplankton community allochthony was strongly regulated by the ecosystem metabolic balance between production and respiration, which in turn was dependent upon the ratio between total autochthonous organic carbon concentrations and water color. Our study for the first time shows that micro-crustacean allochthony is regulated differently in rivers compared to in lacustrine systems, and points to inefficient support of zooplankton biomass by algal resources in turbulent waters.

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