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Sökning: WFRF:(Bagger J.)

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1.
  • Moortgat-Pick, G., et al. (författare)
  • Physics at the e(+) e(-) linear collider
  • 2015
  • Ingår i: European Physical Journal C. - : Springer Science and Business Media LLC. - 1434-6044 .- 1434-6052. ; 75:8
  • Forskningsöversikt (refereegranskat)abstract
    • A comprehensive review of physics at an e(+) e(-) linear collider in the energy range of root s = 92 GeV-3 TeV is presented in view of recent and expected LHC results, experiments from low-energy as well as astroparticle physics. The report focusses in particular on Higgs-boson, top-quark and electroweak precision physics, but also discusses several models of beyond the standard model physics such as super-symmetry, little Higgs models and extra gauge bosons. The connection to cosmology has been analysed as well.
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  • Guiastrennec, Benjamin, et al. (författare)
  • Mechanism-Based Modeling of Gastric Emptying Rate and Gallbladder Emptying in Response to Caloric Intake
  • 2016
  • Ingår i: CPT. - : Wiley. - 2163-8306. ; 5:12, s. 692-700
  • Tidskriftsartikel (refereegranskat)abstract
    • Bile acids released postprandially modify the rate and extent of absorption of lipophilic compounds. The present study aimed to predict gastric emptying (GE) rate and gallbladder emptying (GBE) patterns in response to caloric intake. A mechanism-based model for GE, cholecystokinin plasma concentrations, and GBE was developed on data from 33 patients with type 2 diabetes and 33 matched nondiabetic individuals who were administered various test drinks. A feedback action of the caloric content entering the proximal small intestine was identified for the rate of GE. The cholecystokinin concentrations were not predictive of GBE, and an alternative model linking the nutrients amount in the upper intestine to GBE was preferred. Relative to fats, the potency on GBE was 68% for proteins and 2.3% for carbohydrates. The model predictions were robust across a broad range of nutritional content and may potentially be used to predict postprandial changes in drug absorption.
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  • Sondergaard, E., et al. (författare)
  • ERG Controls B Cell Development by Promoting Igh V-to-DJ Recombination
  • 2019
  • Ingår i: Cell Reports. - : Elsevier BV. - 2211-1247. ; 29:9
  • Tidskriftsartikel (refereegranskat)abstract
    • B cell development depends on the coordinated expression and cooperation of several transcription factors. Here we show that the transcription factor ETS-related gene (ERG) is crucial for normal B cell development and that its deletion results in a substantial loss of bone marrow B cell progenitors and peripheral B cells, as well as a skewing of splenic B cell populations. We find that ERG-deficient B lineage cells exhibit an early developmental block at the pre-B cell stage and proliferate less. The cells fail to express the immunoglobulin heavy chain due to inefficient V-to-DJ recombination, and cells that undergo recombination display a strong bias against incorporation of distal V gene segments. Furthermore, antisense transcription at PAX5-activated intergenic repeat (PAIR) elements, located in the distal region of the Igh locus, depends on ERG. These findings show that ERG serves as a critical regulator of B cell development by ensuring efficient and balanced V-to-DJ recombination.
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  • Andersen, Naja Steen, et al. (författare)
  • Processes affecting genetic structure and conservation: a case study of wild and cultivated Brassica rapa
  • 2009
  • Ingår i: Genetic Resources and Crop Evolution. - Dordrecht : Springer Science and Business Media LLC. - 0925-9864 .- 1573-5109. ; 56:2, s. 189-200
  • Tidskriftsartikel (refereegranskat)abstract
    • When planning optimal conservation strategies for wild and cultivated types of a plant species, a number of influencing biological and environmental factors should be considered from the outset. In the present study Brassica rapa was used to illustrate this: to develop Scandinavian conservation strategies for wild and cultivated B. rapa, DNA-marker analysis was performed on 15 cultivated and 17 wild accessions of B. rapa plus 8 accessions of the cross compatible B. napus. The B. rapa cultivars were bred in Sweden and Finland in 1944-1997 and the wild B. rapa material was collected from Denmark, Sweden and United Kingdom. The B. napus accessions were bred within the last 20 years in the Scandinavian countries. Results were based on scoring of 131 polymorphic ISSR markers in the total plant material. A Bayesian Markov chain Monte Carlo (MCMC) approach implemented in NewHybrids demonstrated a clear distinction of B. rapa and B. napus individuals except for three individuals that seemed to be backcrosses. The backcrossed hybrids descended from two Swedish populations, one wild and one escaped. The overall pattern of genetic variation and structure in B. rapa showed that cultivated and wild B. rapa accessions formed two almost separated clusters. Geographical origin and breeding history of cultivars were reflected in these genetic relationships. In addition, wild populations from Denmark and Sweden seemed to be closely related, except for a Swedish population, which seemingly was an escaped cultivar. The study point to that many processes, e.g. spontaneous introgression, naturalisation, breeding and agricultural practise affected the genetic structure of wild and cultivated B. rapa populations.
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  • Bagger, Reza, et al. (författare)
  • RF LDMOS Power Amplifier Integrated Circuit for W-CDMA/TD-SCDMA applications
  • 2007
  • Ingår i: | Export | Download | Add to List | More... Proceedings of the 36th European Microwave Conference, EuMC 2006. - : IEEE. ; , s. 1343-1346
  • Konferensbidrag (refereegranskat)abstract
    • This article presents an LDMOS power amplifier integrated circuit for W-CDMA/TD-SCDMA applications. The IC has been developed in Infineon's Si LDMOS IC technology. The gain achieved was 27 dB. When tuned for TD-SCDMA, the IC showed 50 W PEP at IM3 = -30 dBc (two-tone). When tuned for W-CDMA, it showed 40 W PEP at IM3 = -30 dBc (two-tone) and 400 MHz bandwidth (20%) around 2100 MHz. The PA IC has been characterized under all typical modulation formats, and is included in Infineon's product portfolio of power ICs for radio base stations
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  • Cruys-Bagger, Nicolaj, et al. (författare)
  • An amperometric enzyme biosensor for real-time measurements of cellobiohydrolase activity on insoluble cellulose
  • 2012
  • Ingår i: Biotechnology and Bioengineering. - : Wiley. - 1097-0290 .- 0006-3592. ; 109:12, s. 3199-3204
  • Tidskriftsartikel (refereegranskat)abstract
    • An amperometric enzyme biosensor for continuous detection of cellobiose has been implemented as an enzyme assay for cellulases. We show that the initial kinetics for cellobiohydrolase I, Cel7A from Trichoderma reesei, acting on different types of cellulose substrates, semi-crystalline and amorphous, can be monitored directly and in real-time by an enzyme-modified electrode based on cellobiose dehydrogenase (CDH) from Phanerochaete chrysosporium (Pc). PcCDH was cross-linked and immobilized on the surface of a carbon paste electrode which contained a mediator, benzoquinone. An oxidation current of the reduced mediator, hydroquinone, produced by the CDH-catalyzed reaction with cellobiose, was recorded under constant-potential amperometry at +0.5V (vs. Ag/AgCl). The CDH-biosensors showed high sensitivity (87.7 mu AmM-1cm-2), low detection limit (25nM), and fast response time (t95%similar to 3s) and this provided experimental access to the transient kinetics of cellobiohydrolases acting on insoluble cellulose. The response from the CDH-biosensor during enzymatic hydrolysis was corrected for the specificity of PcCDH for the beta-anomer of cello-oligosaccharides and the approach were validated against HPLC. It is suggested that quantitative, real-time data on pure insoluble cellulose substrates will be useful in attempts to probe the molecular mechanism underlying enzymatic hydrolysis of cellulose. Biotechnol. Bioeng. 2012; 109: 31993204. (C) 2012 Wiley Periodicals, Inc.
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  • Kjær, Jørgen Bagger, 1973-, et al. (författare)
  • "Two silos of thinking that were not connected" : a board's attempt to manage the logics of recreational and elite youth soccer in an urban community club
  • 2023
  • Ingår i: European Journal for Sport and Society. - : Taylor & Francis Group. - 1613-8171 .- 2380-5919. ; 20:3, s. 262-278
  • Tidskriftsartikel (refereegranskat)abstract
    • The objective of this study was to explore the Board of a youth soccer club’s decisions and actions as it transitioned from a small community club to the biggest soccer club in a metropolitan area in the United States. The study was designed as a case study using observations, interviews, document analysis as its primary method. Using an institutional logics perspective, this study examines how board members’ social identities and goals were not always congruent with each other, and explains why the organisation was unable to make any meaningful changes and instead most often reproduced prevailing institutional logics. We argue this case serve as an example of embedded agency. The consequence was a dysfunctional board that was unable to further develop sport programs and services. More studies are needed to further problematise how community clubs navigate the new youth sport landscape from a leadership and government perspective and help navigate positive change.
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  • Lönnberg, Tapio, et al. (författare)
  • Single-cell RNA-seq and computational analysis using temporal mixture modelling resolves Th1/Tfh fate bifurcation in malaria
  • 2017
  • Ingår i: Science immunology. - : American Association for the Advancement of Science (AAAS). - 2470-9468. ; 2:9
  • Tidskriftsartikel (refereegranskat)abstract
    • Differentiation of naïve CD4(+) T cells into functionally distinct T helper subsets is crucial for the orchestration of immune responses. Due to extensive heterogeneity and multiple overlapping transcriptional programs in differentiating T cell populations, this process has remained a challenge for systematic dissection in vivo. By using single-cell transcriptomics and computational analysis using a temporal mixtures of Gaussian processes model, termed GPfates, we reconstructed the developmental trajectories of Th1 and Tfh cells during blood-stage Plasmodium infection in mice. By tracking clonality using endogenous TCR sequences, we first demonstrated that Th1/Tfh bifurcation had occurred at both population and single-clone levels. Next, we identified genes whose expression was associated with Th1 or Tfh fates, and demonstrated a T-cell intrinsic role for Galectin-1 in supporting a Th1 differentiation. We also revealed the close molecular relationship between Th1 and IL-10-producing Tr1 cells in this infection. Th1 and Tfh fates emerged from a highly proliferative precursor that upregulated aerobic glycolysis and accelerated cell cycling as cytokine expression began. Dynamic gene expression of chemokine receptors around bifurcation predicted roles for cell-cell in driving Th1/Tfh fates. In particular, we found that precursor Th cells were coached towards a Th1 but not a Tfh fate by inflammatory monocytes. Thus, by integrating genomic and computational approaches, our study has provided two unique resources, a database www.PlasmoTH.org, which facilitates discovery of novel factors controlling Th1/Tfh fate commitment, and more generally, GPfates, a modelling framework for characterizing cell differentiation towards multiple fates.
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  • PADDOCK, E. LAYNE, et al. (författare)
  • Voice and Culture: A Prospect Theory Approach
  • 2015
  • Ingår i: Journal of Behavioral Decision Making. - : Wiley. - 0894-3257 .- 1099-0771. ; 28:2, s. 167-175
  • Tidskriftsartikel (refereegranskat)abstract
    • The present study examines the congruence of individuals’ minimum preferred amounts of voice with the prospect theory value function across nine countries. Accounting for previously ignored minimum preferred amounts of voice and actual voice amounts integral to testing the steepness of gain and loss functions explicated in prospect theory, we use curve fitting to show that ratings of procedural justice fit prospect theory’s value function specifically. Further, we investigate the form of this function across nine countries that range in power distance. Results suggest that the form of the value function is congruent with prospect theory, showing an S-shaped curve that is steeper in the loss than in the gain domain. Further, this pattern is similar across countries. Theoretical and practical implications of these results for both decision making and organizational justice are discussed.
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  • Røge, Rikke Meldgaard, 1987-, et al. (författare)
  • Mathematical modelling of glucose-dependent insulinotropic polypeptide and glucagon-like peptide-1 following ingestion of glucose
  • 2017
  • Ingår i: Basic & Clinical Pharmacology & Toxicology. - : Wiley. - 1742-7835 .- 1742-7843. ; 121:4, s. 290-297
  • Tidskriftsartikel (refereegranskat)abstract
    • The incretin hormones, glucose-dependent insulinotropic polypeptide (GIP) and glucagon-like peptide-1 (GLP-1), play an important role in glucose homeostasis by potentiating glucose-induced insulin secretion. Furthermore, GLP-1 has been reported to play a role in glucose homeostasis by inhibiting glucagon secretion and delaying gastric emptying. As the insulinotropic effect of GLP-1 is preserved in patients with type 2 diabetes (T2D), therapies based on GLP-1 have been developed in recent years, and these have proven to be efficient in the treatment of T2D. The endogenous secretion of both GIP and GLP-1 is stimulated by glucose in the small intestine, and the release is dependent on the amount. In this work, we developed a semimechanistic model describing the release of GIP and GLP-1 after ingestion of various glucose doses in healthy volunteers and patients with T2D. In the model, the release of both hormones is stimulated by glucose in the proximal small intestine, and no differences in the secretion dynamics between healthy individuals and patients with T2D were identified after taking differences in glucose profiles into account.
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  • Trempenau, ML, et al. (författare)
  • The histone demethylase KDM5C functions as a tumor suppressor in AML by repression of bivalently marked immature genes
  • 2023
  • Ingår i: Leukemia. - : Springer Science and Business Media LLC. - 1476-5551 .- 0887-6924. ; 37:3, s. 593-605
  • Tidskriftsartikel (refereegranskat)abstract
    • Epigenetic regulators are frequently mutated in hematological malignancies including acute myeloid leukemia (AML). Thus, the identification and characterization of novel epigenetic drivers affecting AML biology holds potential to improve our basic understanding of AML and to uncover novel options for therapeutic intervention. To identify novel tumor suppressive epigenetic regulators in AML, we performed an in vivo short hairpin RNA (shRNA) screen in the context of CEBPA mutant AML. This identified the Histone 3 Lysine 4 (H3K4) demethylase KDM5C as a tumor suppressor, and we show that reduced Kdm5c/KDM5C expression results in accelerated growth both in human and murine AML cell lines, as well as in vivo in Cebpa mutant and inv(16) AML mouse models. Mechanistically, we show that KDM5C act as a transcriptional repressor through its demethylase activity at promoters. Specifically, KDM5C knockdown results in globally increased H3K4me3 levels associated with up-regulation of bivalently marked immature genes. This is accompanied by a de-differentiation phenotype that could be reversed by modulating levels of several direct and indirect downstream mediators. Finally, the association of KDM5C levels with long-term disease-free survival of female AML patients emphasizes the clinical relevance of our findings and identifies KDM5C as a novel female-biased tumor suppressor in AML.
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