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| 4. |
- Williamson, Alice, et al.
(författare)
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Genome-wide association study and functional characterization identifies candidate genes for insulin-stimulated glucose uptake
- 2023
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Ingår i: Nature Genetics. - : Springer Nature. - 1061-4036 .- 1546-1718. ; 55:6, s. 973-983
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Tidskriftsartikel (refereegranskat)abstract
- Distinct tissue-specific mechanisms mediate insulin action in fasting and postprandial states. Previous genetic studies have largely focused on insulin resistance in the fasting state, where hepatic insulin action dominates. Here we studied genetic variants influencing insulin levels measured 2 h after a glucose challenge in >55,000 participants from three ancestry groups. We identified ten new loci (P < 5 × 10-8) not previously associated with postchallenge insulin resistance, eight of which were shown to share their genetic architecture with type 2 diabetes in colocalization analyses. We investigated candidate genes at a subset of associated loci in cultured cells and identified nine candidate genes newly implicated in the expression or trafficking of GLUT4, the key glucose transporter in postprandial glucose uptake in muscle and fat. By focusing on postprandial insulin resistance, we highlighted the mechanisms of action at type 2 diabetes loci that are not adequately captured by studies of fasting glycemic traits.
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| 5. |
- Wulaningsih, W., et al.
(författare)
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A competing risks analysis of the association between prediagnostic serum glucose and lipids and breast cancer survival
- 2016
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Ingår i: Cancer Research. - Kings Coll London, Div Canc Studies, Canc Epidemiol Grp, London WC2R 2LS, England. Kings Coll London, Inst Math & Mol Biomed, London WC2R 2LS, England. Uppsala Univ, Uppsala, Sweden. Reg Canc Ctr, Uppsala, Sweden. Karolinska Inst, Inst Environm Med, S-10401 Stockholm, Sweden. Karolinska Inst, S-10401 Stockholm, Sweden. AstraZeneca R&D, Mlndal, Switzerland. CALAB Res, Madrid, Spain.. - 0008-5472 .- 1538-7445. ; 76
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
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| 7. |
- GOTHELID, M, et al.
(författare)
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GEOMETRY OF THE GE(111)-AU(ROOT-3X-ROOT-3)R 30-DEGREES RECONSTRUCTION
- 1994
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Ingår i: Physical Review B Condensed Matter. - 0163-1829 .- 1095-3795. ; 50:7, s. 4470-4475
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Tidskriftsartikel (refereegranskat)abstract
- A structure model for the Ge(111)-Au(root 3X root 3)R30 degrees surface reconstruction is proposed based on scanning tunneling microscopy (STM) and photoelectron spectroscopy on the Ge 3d and Au 4f core lines. The basic unit is a Au3Ge molecule binding in one-third of the T-1 substrate sites with a gold trimer pointing out of the surface. This leaves two-thirds of a monolayer of unoccupied T-1 sites which make up a hexagonal honeycomb pattern. Two types of STM images have been obtained which are explained within this model, where either the trimers or the substrate Ge atoms are probed depending on the specific tip conditions in combination with the sample bias voltage. Furthermore, small insets of a metallic (1X1) structure are found at low gold coverage together with a distorted (2X2) surface structure.
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| 8. |
- Göthelid, M., et al.
(författare)
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Adatom and rest-atom contributions in Ge(111)c(2×8) and Ge(111)-Sn(7×7) core-level spectra
- 1993
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Ingår i: Physical Review B. - 0163-1829. ; 48:3, s. 2012-2015
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Tidskriftsartikel (refereegranskat)abstract
- We have identified the adatom contribution in the Ge 3d core-level spectra from the clean Ge(111)c(2×8) surface, shifted 0.17 eV to higher binding energy compared to the bulk. This adatom component vanishes in the Ge(111)-Sn(7×7) surface core-level spectra where Sn occupies the adatom site. Moreover we report the observation of an earlier proposed difference between the rest atoms in the c(2×8) structure, and also a shift to lower binding energy for the rest atoms in both structures studied. © 1993 The American Physical Society.
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| 9. |
- Hammar, M., et al.
(författare)
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In situ ultrahigh vacuum transmission electron microscopy studies of hetero-epitaxial growth I. Si(001)/Ge
- 1996
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Ingår i: Surface Science. - : Elsevier BV. - 0039-6028. ; 349:2, s. 129-144
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Tidskriftsartikel (refereegranskat)abstract
- We use ultrahigh vacuum transmission electron microscopy (UHV-TEM) to study the growth of Ge on Si(001) in real time at different temperatures and for coverages ranging from the initial monolayers to the development and relaxation of 3D islands. During growth of the first monolayers the surface gradually changes from a disordered missing-dimer structure to a rather well ordered (2 × 8) reconstruction, an evolution clearly resolved by the TEM. As the coverage is increased 3D islands starts to form. The growth and relaxation of these islands are shown to depend significantly on the temperature, e.g. with different dislocations formed at high and low temperatures. We interpret this difference in terms of the brittle-ductile transition in Ge, below which dislocation glide is frozen out. An interesting observation is that islands grown at low temperatures are more fully relaxed than those grown at higher temperatures. At high enough temperature the islands are initially, up to a specific size, coherent with the substrate and further growth occurs in a remarkably oscillatory fashion with the introduction of each (60°-type) dislocation, where the core of the island, of about 2000 Å in diameter, remains fully strained. However, in the low-temperature regime the islands grow relaxed from the outset with pure edge dislocations continuously being introduced in the moving edges. For temperatures less than 600̊C the transition from 2D to 3D growth occurs via the formation of small and strained 3D islands, so-called "hut clusters". We monitor the nucleation and characteristics of these clusters and discuss their possible role in the formation of relaxed 3D islands. The different growth mechanisms are discussed in terms of a simple model for the energetics of strain-relaxed islands, leading to a qualitative description of the temperature-dependent growth modes.
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| 10. |
- Le Lay, G., et al.
(författare)
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STM and synchrotron radiation studies of "prototypical" metal{plus 45 degree rule}semiconductor systems
- 1994
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Ingår i: Surface Science. - 0039-6028. ; 307-309:PART A, s. 280-294
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Tidskriftsartikel (refereegranskat)abstract
- Since the origin of surface science noble metal{plus 45 degree rule}elemental semiconductor couples have been considered as "prototypical" systems. After three decades of research their structural and electronic properties remain an intriguing maze despite recent advances made, especially thanks to the development of the near-field microscopies and the extensive use of synchrotron radiation in surface crystallography and in high-resolution photoelectron spectroscopy. In the last few years, lead, as a replacement inert metal, has nearly gained the pole position in the display of exotic behaviour. This paper gives a flavour of this mystery story and highlights some puzzling questions. © 1994.
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| 11. |
- LeGoues, F. K., et al.
(författare)
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Cyclic growth of strain-relaxed islands
- 1994
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Ingår i: Physical Review Letters. - 0031-9007. ; 73:2, s. 300-303
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Tidskriftsartikel (refereegranskat)abstract
- Growth of Ge islands on Si(001) is observed in real time with high spatial resolution, using UHV transmission electron microscopy. We are able to monitor the formation of successive strain-relieving dislocations. The shape of the island oscillates as it grows, with each cycle corresponding to the introduction of one dislocation. Such growth cycles are shown to be a general feature of the growth of strain-relaxed islands, occurring even in equilibrium. © 1994 The American Physical Society.
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| 12. |
- LeGoues, F. K., et al.
(författare)
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In situ TEM study of the growth of Ge on Si(111)
- 1996
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Ingår i: Surface Science. - : Elsevier BV. - 0039-6028. ; 349:3, s. 249-266
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Tidskriftsartikel (refereegranskat)abstract
- We have used the UHV-TEM to study the growth of Ge on Si(111) in situ, from the deposition of the first monolayer to complete relaxation by the introduction of dislocations. We show that, at 650°C, the growth of Ge islands is dominated by steps on the surface. Indeed, islands nucleated on steps that run along the 〈112〉 direction have a very high aspect ratio, while other islands are roughly triangular in shape. Dislocations form initially exclusively by coalescence of these smaller islands. Further growth involves a complicated competition between surrounding strained islands and the relaxed island. At lower temperature (350°C), steps still are a preferred site for island formation, but the limited surface diffusion makes it possible for islands to also nucleate on flat terraces. In this case, an island grows by incorporating dislocations at its edge, which results in a completely relaxed island from the start, and a very uniform network of dislocations. These in situ electron microscopy studies reveal a much more complicated and rich growth process than previously imagined, and tie previously obtained results together into a single picture.
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| 13. |
- LELAY, G, et al.
(författare)
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STM AND SYNCHROTRON-RADIATION STUDIES OF PROTOTYPICAL METAL-SEMICONDUCTOR SYSTEMS
- 1994
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Ingår i: Surface Science. - : Elsevier BV. - 0039-6028 .- 1879-2758. ; 307, s. 280-294
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Tidskriftsartikel (refereegranskat)abstract
- Since the origin of surface science noble metal/elemental semiconductor couples have been considered as ''prototypical'' systems. After three decades of research their structural and electronic properties remain an intriguing maze despite recent advances made, especially thanks to the development of the near-field microscopies and the ''tensive use of synchrotron radiation in surface crystallography and in high-resolution photoelectron spectroscopy. In the last few years, lead, as a replacement inert metal, has nearly gained the pole position in the display of exotic behaviour. This paper gives a flavour of this mystery story and highlights some puzzling questions.
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| 15. |
- Pereira, Maria J, 1981-, et al.
(författare)
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FKBP5 expression in human adipose tissue increases following dexamethasone exposure and is associated with insulin resistance
- 2014
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Ingår i: Metabolism: Clinical and Experimental. - : Elsevier BV. - 0026-0495 .- 1532-8600. ; 63:9, s. 1198-1208
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Tidskriftsartikel (refereegranskat)abstract
- Objective To study effects of dexamethasone on gene expression in human adipose tissue aiming to identify potential novel mechanisms for glucocorticoid-induced insulin resistance. Materials/methods Subcutaneous and omental adipose tissue, obtained from non-diabetic donors (10 M/15 F; age: 28-60 years; BMI: 20.7-30.6 kg/m2), was incubated with or without dexamethasone (0.003-3 μmol/L) for 24 h. Gene expression was assessed by microarray and real time-PCR and protein expression by immunoblotting. Results FKBP5 (FK506-binding protein 5) and CNR1 (cannabinoid receptor 1) were the most responsive genes to dexamethasone in both subcutaneous and omental adipose tissue (~ 7-fold). Dexamethasone increased FKBP5 gene and protein expression in a dose-dependent manner in both depots. The gene product, FKBP51 protein, was 10-fold higher in the omental than in the subcutaneous depot, whereas the mRNA levels were similar. Higher FKBP5 gene expression in omental adipose tissue was associated with reduced insulin effects on glucose uptake in both depots. Furthermore, FKBP5 gene expression in subcutaneous adipose tissue was positively correlated with serum insulin, HOMA-IR and subcutaneous adipocyte diameter and negatively with plasma HDL-cholesterol. FKBP5 SNPs were found to be associated with type 2 diabetes and diabetes-related phenotypes in large population-based samples. Conclusions Dexamethasone exposure promotes expression of FKBP5 in adipose tissue, a gene that may be implicated in glucocorticoid-induced insulin resistance. © 2014 Elsevier Inc.
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| 17. |
- Rowley, M., et al.
(författare)
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A latent class model for competing risks
- 2017
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Ingår i: Statistics in Medicine. - : Wiley. - 0277-6715 .- 1097-0258. ; 36:13, s. 2100-2119
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Tidskriftsartikel (refereegranskat)abstract
- Survival data analysis becomes complex when the proportional hazards assumption is violated at population level or when crude hazard rates are no longer estimators of marginal ones. We develop a Bayesian survival analysis method to deal with these situations, on the basis of assuming that the complexities are induced by latent cohort or disease heterogeneity that is not captured by covariates and that proportional hazards hold at the level of individuals. This leads to a description from which risk-specific marginal hazard rates and survival functions are fully accessible, 'decontaminated' of the effects of informative censoring, and which includes Cox, random effects and latent classmodels as special cases. Simulated data confirm that our approach can map a cohort's substructure and remove heterogeneity-induced informative censoring effects. Application to data from the Uppsala Longitudinal Study of Adult Men cohort leads to plausible alternative explanations for previous counter-intuitive inferences on prostate cancer. The importance of managing cardiovascular disease as a comorbidity in women diagnosed with breast cancer is suggested on application to data from the Swedish Apolipoprotein Mortality Risk Study.
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| 18. |
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| 19. |
- TORNEVIK, C, et al.
(författare)
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ADSORPTION OF SN ON SI(111)7X7 - RECONSTRUCTIONS IN THE MONOLAYER REGIME
- 1994
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Ingår i: Surface Science. - : Elsevier BV. - 0039-6028 .- 1879-2758. ; 314:2, s. 179-187
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Tidskriftsartikel (refereegranskat)abstract
- Different monolayer phases of Sn on Si(111)7 x 7 have been studied by means of scanning tunneling microscopy (STM), core-level photoelectron spectroscopy (XPS), and Rutherford backscattering spectrometry (RBS). The STM results show that square-root 3 x square-root 3 reconstructions are obtained for room-temperature deposition of 1/3 ML of Sn followed by sample annealing in a broad temperature range. A T4 Sn adatom square-root 3 x square-root 3 phase is formed for temperatures between 500 and 800-degrees-C, with a concentration of defects that is strongly dependent on the temperature and which is as high as 25% for the lowest temperatures. Above 825-degrees-C a second square-root 3 x square-root 3 adatom reconstruction is formed, a mosaic-like phase with a 1: 1 mixture of Si and Sn atoms in T4 positions. The results from investigations of the higher coverage 2 square-root 3 x 2 square-root 3 reconstruction by XPS and RBS support the theory that this phase is a two-layer epitaxial Sn structure with all Si(111) dangling bonds saturated. The Sn coverage for this phase was determined to be between 1 and 1.2 ML.
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| 20. |
- Törnevik, C., et al.
(författare)
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Adsorption of Sn onSi(111)7 × 7 : reconstructions in the monolayer regime
- 1994
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Ingår i: Surface Science. - 0039-6028. ; 314:2, s. 179-187
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Tidskriftsartikel (refereegranskat)abstract
- Different monolayer phases of Sn on Si(111)7 × 7 have been studied by means of scanning tunneling microscopy (STM), core-level photoelectron spectroscopy (XPS), and Rutherford backscattering spectrometry (RBS). The STM results show that 3 × 3 reconstructions are obtained for room-temperature deposition of 1 3 ML of Sn followed by sample annealing in a broad temperature range. A T4 Sn adatom 3 ×3 phase is formed for temperatures between 500 and 800°C, with a concentration of defects that is strongly dependent on the temperature and which is as high as 25% for the lowest temperatures. Above 825°C a second 3×3 adatom reconstruction is formed, a mosaic-like phase with a 1:1 mixture of Si and Sn atoms in T4 positions. The results from investigations of the higher coverage 2 3 × 2 3 reconstruction by XPS and RBS support the theory that this phase is a two-layer epitaxial Sn structure with all Si(111) dangling bonds saturated. The Sn coverage for this phase was determined to be between 1 and 1.2 ML. © 1994.
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| 21. |
- Vaitkus, J., et al.
(författare)
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Scanning tunneling microscopy of CdSe single crystal cleaved and "real" surface
- 1994
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Ingår i: Journal of Crystal Growth. - : Elsevier BV. - 0022-0248. ; 138:1-4, s. 545-549
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Tidskriftsartikel (refereegranskat)abstract
- Ultrahigh vacuum-cleaved and as-grown surfaces of CdSe single crystals were investigated by scanning tunneling microscopy. The single crystals were grown by Reynolds-Green method. Striations and terrace-step structure have been found. The surface atomic geometry was found and investigated. The (1120) face geometry (structure formed by elementary cell of 0.75 × 0.7 nm2) as well as other type structures (e.g., 2.1 × 0.75 nm2 elementary cell) have been determined. The variations of the band gap at the surface have been found. The band values in the range 2.0-2.6 eV on a cleaved surface and 1.1-2.0 eV on an as-grown surface were measured and explained as being the influence of surface relaxation and gas adsorption. © 1994.
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| 25. |
- Arthur, R., et al.
(författare)
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Serum inflammatory markers in relation to prostate cancer severity and death in the Swedish AMORIS study
- 2018
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Ingår i: International Journal of Cancer. - : WILEY. - 0020-7136 .- 1097-0215. ; 142:11, s. 2254-2262
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Tidskriftsartikel (refereegranskat)abstract
- Inflammation is a well-documented driver of cancer development and progression. However, little is known about its role in prostate carcinogenesis. Thus, we examined the association of C-reactive protein (CRP), haptoglobin, albumin and white blood cells (WBC) with prostate cancer (PCa) severity (defined by PCa risk category and clinicopathological characteristics) and progression (defined by PCa death). We selected 8,471 Swedish men with newly diagnosed PCa who had exposure measurements taken approximately 14 years prior to diagnosis. We calculated odds ratio (OR) and 95% confidence interval (CI) for the associations between the inflammatory markers and PCa severity using logistic regression, while Cox proportional hazard regression was used for the associations with overall and PCa death. Serum CRP levels were associated with increased odds of high risk and metastatic PCa, and high PSA levels (20 mu g/L) (OR: 1.29; 95% CI: 1.06-1.56, 1.32; 1.05-1.65 and 1.51; 1.26-1.81, respectively). Similarly, higher haptoglobin levels were associated with increased odds of metastatic PCa, high PSA level and possibly high grade PCa (1.38; 1.10-1.74, 1.50; 1.17-1.93 and 1.25; 1.00-1.56, respectively). Albumin was positively associated with Gleason 4+3 tumour (1.38; 1.02-1.86) and overall death (HRunit increase in log: 1.60; 95% CI: 1.11-2.30), but inversely associated with high risk PCa and high PSA levels (20 mu g/L) (0.71; 0.56-0.89 and 0.72; 0.5 9-0.90). WBC was associated with increased odds of T3-T4 PCa. Except for albumin, none of these markers were associated with PCa death or overall death. Systemic inflammation as early as 14 years prior to diagnosis may influence prostate cancer severity. What's new? High levels of C-reactive protein can presage a particularly malignant prostate cancer, new results show. Cancers certainly arise in the wake of chronic inflammation, but it's not known exactly how markers of inflammation initiate prostate cancer. Here, the authors show that systemic inflammation can worsen the severity of the cancer, even if it occurred long before the cancer's onset. High levels of CRP and haptoglobin, they found, were associated with prostate cancer with high PSA and metastasis. The question remains whether inflammation pushes cancer cells into a more malignant mode, or selects for the more dangerous cells early on.
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