| 1. |
- Blanton, Michael R., et al.
(författare)
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Sloan Digital Sky Survey IV : Mapping the Milky Way, Nearby Galaxies, and the Distant Universe
- 2017
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Ingår i: Astronomical Journal. - : IOP Publishing Ltd. - 0004-6256 .- 1538-3881. ; 154:1
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Tidskriftsartikel (refereegranskat)abstract
- We describe the Sloan Digital Sky Survey IV (SDSS-IV), a project encompassing three major spectroscopic programs. The Apache Point Observatory Galactic Evolution Experiment 2 (APOGEE-2) is observing hundreds of thousands of Milky Way stars at high resolution and. high signal-to-noise ratios in the near-infrared. The Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey is obtaining spatially resolved spectroscopy for thousands of nearby galaxies (median z similar to 0.03). The extended Baryon Oscillation Spectroscopic Survey (eBOSS) is mapping the galaxy, quasar, and neutral gas distributions between z similar to 0.6 and 3.5 to constrain cosmology using baryon acoustic oscillations, redshift space distortions, and the shape of the power spectrum. Within eBOSS, we are conducting two major subprograms: the SPectroscopic IDentification of eROSITA Sources (SPIDERS), investigating X-ray AGNs. and galaxies in X-ray clusters, and the Time Domain Spectroscopic Survey (TDSS), obtaining spectra of variable sources. All programs use the 2.5 m Sloan Foundation Telescope at the. Apache Point Observatory; observations there began in Summer 2014. APOGEE-2 also operates a second near-infrared spectrograph at the 2.5 m du Pont Telescope at Las Campanas Observatory, with observations beginning in early 2017. Observations at both facilities are scheduled to continue through 2020. In keeping with previous SDSS policy, SDSS-IV provides regularly scheduled public data releases; the first one, Data Release 13, was made available in 2016 July.
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| 2. |
- Poyatos, R., et al.
(författare)
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Global transpiration data from sap flow measurements: the SAPFLUXNET database
- 2021
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Ingår i: Earth System Science Data. - : Copernicus GmbH. - 1866-3508 .- 1866-3516. ; 13:6, s. 2607-2649
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Tidskriftsartikel (refereegranskat)abstract
- Plant transpiration links physiological responses of vegetation to water supply and demand with hydrological, energy, and carbon budgets at the land-atmosphere interface. However, despite being the main land evaporative flux at the global scale, transpiration and its response to environmental drivers are currently not well constrained by observations. Here we introduce the first global compilation of whole-plant transpiration data from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021). We harmonized and quality-controlled individual datasets supplied by contributors worldwide in a semi-automatic data workflow implemented in the R programming language. Datasets include sub-daily time series of sap flow and hydrometeorological drivers for one or more growing seasons, as well as metadata on the stand characteristics, plant attributes, and technical details of the measurements. SAPFLUXNET contains 202 globally distributed datasets with sap flow time series for 2714 plants, mostly trees, of 174 species. SAPFLUXNET has a broad bioclimatic coverage, with woodland/shrubland and temperate forest biomes especially well represented (80 % of the datasets). The measurements cover a wide variety of stand structural characteristics and plant sizes. The datasets encompass the period between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data are available for most of the datasets, while on-site soil water content is available for 56 % of the datasets. Many datasets contain data for species that make up 90 % or more of the total stand basal area, allowing the estimation of stand transpiration in diverse ecological settings. SAPFLUXNET adds to existing plant trait datasets, ecosystem flux networks, and remote sensing products to help increase our understanding of plant water use, plant responses to drought, and ecohydrological processes. SAPFLUXNET version 0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The "sapfluxnetr" R package - designed to access, visualize, and process SAPFLUXNET data - is available from CRAN.
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| 3. |
- Abolfathi, Bela, et al.
(författare)
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The Fourteenth Data Release of the Sloan Digital Sky Survey : First Spectroscopic Data from the Extended Baryon Oscillation Spectroscopic Survey and from the Second Phase of the Apache Point Observatory Galactic Evolution Experiment
- 2018
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Ingår i: Astrophysical Journal Supplement Series. - : IOP Publishing Ltd. - 0067-0049 .- 1538-4365. ; 235:2
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Tidskriftsartikel (refereegranskat)abstract
- The fourth generation of the Sloan Digital Sky Survey (SDSS-IV) has been in operation since 2014 July. This paper describes the second data release from this phase, and the 14th from SDSS overall (making this Data Release Fourteen or DR14). This release makes the data taken by SDSS-IV in its first two years of operation (2014-2016 July) public. Like all previous SDSS releases, DR14 is cumulative, including the most recent reductions and calibrations of all data taken by SDSS since the first phase began operations in 2000. New in DR14 is the first public release of data from the extended Baryon Oscillation Spectroscopic Survey; the first data from the second phase of the Apache Point Observatory (APO) Galactic Evolution Experiment (APOGEE-2), including stellar parameter estimates from an innovative data-driven machine-learning algorithm known as "The Cannon"; and almost twice as many data cubes from the Mapping Nearby Galaxies at APO (MaNGA) survey as were in the previous release (N = 2812 in total). This paper describes the location and format of the publicly available data from the SDSS-IV surveys. We provide references to the important technical papers describing how these data have been taken (both targeting and observation details) and processed for scientific use. The SDSS web site (www.sdss.org) has been updated for this release and provides links to data downloads, as well as tutorials and examples of data use. SDSS-IV is planning to continue to collect astronomical data until 2020 and will be followed by SDSS-V.
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| 4. |
- Koch, Rebecca E., et al.
(författare)
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No evidence that carotenoid pigments boost either immune or antioxidant defenses in a songbird
- 2018
-
Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 9:1
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Tidskriftsartikel (refereegranskat)abstract
- Dietary carotenoids have been proposed to boost immune system and antioxidant functions in vertebrate animals, but studies aimed at testing these physiological functions of carotenoids have often failed to find support. Here we subject yellow canaries (Serinus canaria), which possess high levels of carotenoids in their tissue, and white recessive canaries, which possess a knockdown mutation that results in very low levels of tissue carotenoids, to oxidative and pathogen challenges. Across diverse measures of physiological performance, we detect no differences between carotenoid-rich yellow and carotenoid-deficient white canaries. These results add further challenge to the assumption that carotenoids are directly involved in supporting physiological function in vertebrate animals. While some dietary carotenoids provide indirect benefits as retinoid precursors, our observations suggest that carotenoids themselves may play little to no direct role in key physiological processes in birds.
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| 5. |
- Koch, Rebecca E., et al.
(författare)
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Testing the resource trade-off hypothesis for carotenoid-based signal honesty using genetic variants of the domestic canary
- 2019
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Ingår i: The Journal of experimental biology. - : The Company of Biologists. - 1477-9145 .- 0022-0949. ; 222
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Tidskriftsartikel (refereegranskat)abstract
- Carotenoid-based coloration in birds is widely considered an honest signal of individual condition, but the mechanisms responsible for condition dependency in such ornaments remain debated. Currently, the most common explanation for how carotenoid coloration serves as a reliable signal of condition is the resource trade-off hypothesis, which proposes that use of carotenoids for ornaments reduces their availability for use by the immune system or for protection from oxidative damage. However, two main assumptions of the hypothesis remain in question: whether carotenoids boost the performance of internal processes such as immune and antioxidant defenses, and whether allocating carotenoids to ornaments imposes a trade-off with such benefits. In this study, we tested these two fundamental assumptions using types of domestic canary (Serinus canaria domestica) that enable experiments in which carotenoid availability and allocation can be tightly controlled. Specifically, we assessed metrics of immune and antioxidant performance in three genetic variants of the color-bred canary that differ only in carotenoid phenotype: ornamented, carotenoid-rich yellow canaries; unornamented, carotenoid-rich 'white dominant' canaries; and unornamented, carotenoid-deficient 'white recessive' canaries. The resource trade-off hypothesis predicts that carotenoid-rich individuals should outperform carotenoid-deficient individuals and that birds that allocate carotenoids to feathers should pay a cost in the form of reduced immune function or greater oxidative stress compared with unornamented birds. We found no evidence to support either prediction; all three canary types performed equally across measures. We suggest that testing alternative mechanisms for the honesty of carotenoid-based coloration should be a key focus of future studies of carotenoid-based signaling in birds.
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| 6. |
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The Seventeenth Data Release of the Sloan Digital Sky Surveys : Complete Release of MaNGA, MaStar, and APOGEE-2 Data
- 2022
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Ingår i: Astrophysical Journal Supplement Series. - : Institute of Physics (IOP). - 0067-0049 .- 1538-4365. ; 259:2
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Tidskriftsartikel (refereegranskat)abstract
- This paper documents the seventeenth data release (DR17) from the Sloan Digital Sky Surveys; the fifth and final release from the fourth phase (SDSS-IV). DR17 contains the complete release of the Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey, which reached its goal of surveying over 10,000 nearby galaxies. The complete release of the MaNGA Stellar Library accompanies this data, providing observations of almost 30,000 stars through the MaNGA instrument during bright time. DR17 also contains the complete release of the Apache Point Observatory Galactic Evolution Experiment 2 survey that publicly releases infrared spectra of over 650,000 stars. The main sample from the Extended Baryon Oscillation Spectroscopic Survey (eBOSS), as well as the subsurvey Time Domain Spectroscopic Survey data were fully released in DR16. New single-fiber optical spectroscopy released in DR17 is from the SPectroscipic IDentification of ERosita Survey subsurvey and the eBOSS-RM program. Along with the primary data sets, DR17 includes 25 new or updated value-added catalogs. This paper concludes the release of SDSS-IV survey data. SDSS continues into its fifth phase with observations already underway for the Milky Way Mapper, Local Volume Mapper, and Black Hole Mapper surveys.
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| 7. |
- Artaxo, Paulo, et al.
(författare)
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Tropical and Boreal Forest – Atmosphere Interactions : A Review
- 2022
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Ingår i: Tellus. Series B, Chemical and physical meteorology. - : Stockholm University Press. - 0280-6509 .- 1600-0889. ; 74:1, s. 24-163
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Forskningsöversikt (refereegranskat)abstract
- This review presents how the boreal and the tropical forests affect the atmosphere, its chemical composition, its function, and further how that affects the climate and, in return, the ecosystems through feedback processes. Observations from key tower sites standing out due to their long-term comprehensive observations: The Amazon Tall Tower Observatory in Central Amazonia, the Zotino Tall Tower Observatory in Siberia, and the Station to Measure Ecosystem-Atmosphere Relations at Hyytiäla in Finland. The review is complemented by short-term observations from networks and large experiments.The review discusses atmospheric chemistry observations, aerosol formation and processing, physiochemical aerosol, and cloud condensation nuclei properties and finds surprising similarities and important differences in the two ecosystems. The aerosol concentrations and chemistry are similar, particularly concerning the main chemical components, both dominated by an organic fraction, while the boreal ecosystem has generally higher concentrations of inorganics, due to higher influence of long-range transported air pollution. The emissions of biogenic volatile organic compounds are dominated by isoprene and monoterpene in the tropical and boreal regions, respectively, being the main precursors of the organic aerosol fraction.Observations and modeling studies show that climate change and deforestation affect the ecosystems such that the carbon and hydrological cycles in Amazonia are changing to carbon neutrality and affect precipitation downwind. In Africa, the tropical forests are so far maintaining their carbon sink.It is urgent to better understand the interaction between these major ecosystems, the atmosphere, and climate, which calls for more observation sites, providing long-term data on water, carbon, and other biogeochemical cycles. This is essential in finding a sustainable balance between forest preservation and reforestation versus a potential increase in food production and biofuels, which are critical in maintaining ecosystem services and global climate stability. Reducing global warming and deforestation is vital for tropical forests.
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| 8. |
- Donor, John, et al.
(författare)
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The Open Cluster Chemical Abundances and Mapping Survey. IV. Abundances for 128 Open Clusters Using SDSS/APOGEE DR16
- 2020
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Ingår i: Astronomical Journal. - : Institute of Physics (IOP). - 0004-6256 .- 1538-3881. ; 159:5
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Tidskriftsartikel (refereegranskat)abstract
- The Open Cluster Chemical Abundances and Mapping (OCCAM) survey aims to constrain key Galactic dynamical and chemical evolution parameters by the construction of a large, comprehensive, uniform, infrared-based spectroscopic data set of hundreds of open clusters. This fourth contribution from the OCCAM survey presents analysis using Sloan Digital Sky Survey/APOGEE DR16 of a sample of 128 open clusters, 71 of which we designate to be "high quality" based on the appearance of their color-magnitude diagram. We find the APOGEE DR16 derived [Fe/H] abundances to be in good agreement with previous high-resolution spectroscopic open cluster abundance studies. Using the high-quality sample, we measure Galactic abundance gradients in 16 elements, and find evolution of some of the [X/Fe] gradients as a function of age. We find an overall Galactic [Fe/H] versus R-GC gradient of -0.068 0.001 dex kpc(-1) over the range of 6 R-GC < 13.9 kpc; however, we note that this result is sensitive to the distance catalog used, varying as much as 15%. We formally derive the location of a break in the [Fe/H] abundance gradient as a free parameter in the gradient fit for the first time. We also measure significant Galactic gradients in O, Mg, S, Ca, Mn, Cr, Cu, Na, Al, and K, some of which are measured for the first time. Our large sample allows us to examine four well-populated age bins in order to explore the time evolution of gradients for a large number of elements and comment on possible implications for Galactic chemical evolution and radial migration.
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| 9. |
- Fougelberg, Julia, et al.
(författare)
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Cryosurgery versus curettage for intraepidermal carcinoma: A randomized controlled trial
- 2023
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Ingår i: Journal of the European Academy of Dermatology and Venereology. - 0926-9959. ; 37:11, s. 2370-2377
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Tidskriftsartikel (refereegranskat)abstract
- BackgroundCryosurgery is a common destructive treatment method for intraepidermal carcinoma (IEC) above the knee. Curettage alone is a simple, non-aggressive and inexpensive treatment method commonly used on benign skin lesions. However, only one study has assessed curettage for treatment of IEC. ObjectiveWe aimed to (1) compare the effectiveness of cryosurgery (standard method) to curettage (experimental method) for treatment of IEC in regard to overall clearance rates at 1-year follow-up, and (2) investigate whether wound healing times differed between the treatment groups. MethodsIn this randomized and controlled, non-inferiority trial, adult patients with one or more IEC with a diameter of 5-20 mm, located above the knee and suitable for destructive treatment were recruited from Sahlgrenska University Hospital (Gothenburg, Sweden). Lesions were randomized to treatment with either cryosurgery or curettage. Wound healing was assessed by a nurse after 4-6 weeks and through self-report forms. Overall clearance was assessed by a dermatologist after 1 year. ResultsIn total, 183 lesions in 147 patients were included, with 93 lesions randomized to cryosurgery and 90 to curettage. Eighty-eight (94.6%) of the lesions in the cryosurgery group and 71 (78.9%) in the curettage group showed an overall clearance at the 1-year follow-up visit (p = 0.002). The non-inferiority analysis was inconclusive. Curettage resulted in both shorter self-reported wound healing times (mean time 3.1 vs. 4.8 weeks, p < 0.001) and a larger proportion of healed wounds after 4-6 weeks (p < 0.001). ConclusionsCryosurgery and curettage both result in high clearance rates for treatment of IEC, but cryosurgery is significantly more effective. On the other hand, curettage may result in shorter wound healing times.
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| 10. |
- Hanssen, S A, et al.
(författare)
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Cost of reproduction in a long-lived bird: incubation effort reduces immune function and future reproduction
- 2005
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Ingår i: Royal Society of London. Proceedings B. Biological Sciences. - : The Royal Society. - 1471-2954. ; 272:1567, s. 1039-1046
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Tidskriftsartikel (refereegranskat)abstract
- Life-history theory predicts that increased current reproductive effort should lead to a fitness cost. This cost of reproduction may be observed as reduced survival or future reproduction, and may be caused by temporal suppression of immune function in stressed or hard-working individuals. In birds, consideration of the costs of incubating eggs has largely been neglected in favour of the costs of brood rearing. We manipulated incubation demand in two breeding seasons (2000 and 2001) in female common eiders (Somateria mollissima) by creating clutches of three and six eggs (natural range 3-6 eggs). The common eider is a long-lived sea-duck where females do not eat during the incubation period. Mass loss increased and immune function (lymphocyte levels and specific antibody response to the non-pathogenic antigens diphtheria and tetanus toxoid) was reduced in females incubating large clutches. The increased incubation effort among females assigned to large incubation demand did not lead to adverse effects on current reproduction or return rate in the next breeding season. However, large incubation demand resulted in long-term fitness costs through reduced fecundity the year after manipulation. Our data show that in eiders, a long-lived species, the cost of high incubation demand is paid in the currency of reduced future fecundity, possibly mediated by reduced immune function.
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| 11. |
- Hanssen, Sveinn, et al.
(författare)
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A label of health: a previous immune challenge is reflected in the expression of a female plumage trait.
- 2008
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Ingår i: Biology letters. - : The Royal Society. - 1744-9561 .- 1744-957X. ; 4:4, s. 379-381
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Tidskriftsartikel (refereegranskat)abstract
- Studies of ornaments as indicators of individual quality have hitherto focused on males, while studies of female ornaments have been almost absent. However, females within the same species may show large variation in both outer appearance and individual quality. We experimentally examined the effect of an immune challenge on the size of white fringes in the wing feathers produced one to two months after the challenge in female common eiders (Somateria mollissima), a long-lived sea duck. Immune-challenged females produced feathers with smaller white fringes, showing that a previous immune challenge may affect the expression of a plumage trait. We also report an unexpected difference in the expression of this white plumage trait within the immune-challenged group, related to the specific immune response against one of the injected antigens.
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| 12. |
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| 13. |
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| 14. |
- Hasselquist, Eliza Maher, et al.
(författare)
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Contrasting effects of geomorphic complexity on diversity of three aquatic organism groups after stream restoration
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Annan publikation (övrigt vetenskapligt/konstnärligt)abstract
- Ecological theory states that greater habitat heterogeneity should support higher biodiversity. Many stream restoration projects aim to increase geomorphic complexity, assuming that this increases habitat heterogeneity and, thus, biodiversity. However, little evidence has been published that supports this theory, especially with respect to stream restoration and aquatic organisms.Previous assessments of stream habitat restoration have suffered from four major limitations: (1) incomplete quantification of habitat complexity metrics, (2) assessment of the responses of only one organism group, most often macroinvertebrates, (3) mismatch between scale of restoration and scale of disturbance, and (4) limited number of restoration measures applied.We used 12 metrics of geomorphic complexity spanning five dimensions of complexity (sediment grain size distribution, longitudinal profile, cross section, planform, and instream wood) to evaluate if the diversity, abundance and community composition of three aquatic organism groups (benthic macroinvertebrates, diatoms and macrophytes) relate positively to complexity along near-natural, restored and channelised stream reaches in rural northern Sweden where disturbance to the streams has been primarily reach-scale channelisation to facilitate timber floating.We found that the variation in biodiversity and abundance within each of the three organism groups could be described by multiple regression models that included only geomorphic complexity metrics, but the variation within an organism group could rarely be described by only one metric of complexity in isolation. Rather, three metrics were needed on average to describe the variation in biodiversity and abundance, and rarely did all metrics relate positively to diversity. Sediment grain size distribution metrics were most often significant as explanatory variables, but were inconsistent in the direction of influence. The other four dimensions of complexity were less consistently significant but were nearly all positively related to our diversity metrics.Most of the variation in these metrics was driven by advanced restoration techniques and to a lesser extent older best practice techniques. Three complexity metrics were most often included in multiple regression models as well as described community composition in ordinations: a metric quantifying heterogeneity of small sediment sizes, a metric that represents the variation in stream depth along the longitudinal profile, and instream wood metrics. Therefore, specifically these metrics could be targets for future restoration. The organism groups were not concordant in their patterns of diversity, abundance, or community composition; thus, none can be used as a surrogate in monitoring biodiversity of these sites.Synthesis and applications. Geomorphic complexity should be measured in multiple dimensions, and ideally in all five dimensions, to understand the full breadth of restoration impacts to which organisms could be responding. More than one organism group should be used in monitoring to ensure biodiversity goals are met. Finally, even though the scale of the restorations matched the scale of the disturbance at the reach scale, the older best practice methods of restoration rarely restored the large-scale features necessary to bring the sites up to their potential levels of complexity as these elements (large boulders, bedrock, log jams) had been destroyed or removed from the system. Although the advanced restoration sites were the youngest, advanced restoration techniques that added big boulders, coarse gravel and instream wood increased complexity to a level that elicited a biological response. Finally, the complexity level needed to elicit a biological response could be difficult to understand for a given system, so we suggest doing restoration work in an experimental way in collaboration with geomorphologists to determine what level of complexity is needed.
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| 15. |
- Hasselquist, Eliza Maher, et al.
(författare)
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Contrasting Responses among Aquatic Organism Groups to Changes in Geomorphic Complexity Along a Gradient of Stream Habitat Restoration : Implications for Restoration Planning and Assessment
- 2018
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Ingår i: Water. - : MDPI. - 2073-4441. ; 10:10
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Tidskriftsartikel (refereegranskat)abstract
- Many stream restoration projects aim to increase geomorphic complexity, assuming that this increases habitat heterogeneity and, thus, biodiversity. However, empirical data supporting these linkages remain scant. Previous assessments of stream restoration suffer from incomplete quantification of habitat complexity, or a narrow focus on only one organism group and/or one restoration measure, limiting learning. Based on a comprehensive quantification of geomorphic complexity in 20 stream reaches in northern Sweden, ranging from streams channelized for timber floating to restored and reference reaches, we investigated responses of macroinvertebrates, diatoms, and macrophytes to multiple geomorphic metrics. Sediment size heterogeneity, which was generally improved in restored sites, favored macroinvertebrate and diatom diversity and macroinvertebrate abundance. In contrast, macrophyte diversity responded to increased variation along the longitudinal stream profile (e.g., step-pools), which was not consistently improved by the restoration. Our analyses highlight the value of learning across multiple restoration projects, both in identifying which aspects of restoration have succeeded, and pinpointing other measures that might be targeted during adaptive management or future restoration. Given our results, a combination of restoration measures targeting not only sediment size heterogeneity, but also features such as step-pools and instream wood, is most likely to benefit benthic biota in streams.
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| 16. |
- Hasselquist, Eliza Maher, et al.
(författare)
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Time for recovery of riparian plants in restored northern Swedish streams : A chronosequence study
- 2015
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Ingår i: Ecological Applications. - : Wiley. - 1051-0761 .- 1939-5582. ; 25:5, s. 1373-1389
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Tidskriftsartikel (refereegranskat)abstract
- A lack of ecological responses in stream restoration projects has been prevalent throughout recent literature with many studies reporting insufficient time for recovery. We assessed the relative importance of time, site variables, and landscape setting for understanding how plant species richness and understory productivity recover over time in riparian zones of northern Swedish streams. We used a space-for-time substitution consisting of 13 stream reaches restored 5-25 years ago, as well as five unrestored channelized reference reaches. We inventoried the riparian zone for all vascular plant species along 60-m study reaches and quantified cover and biomass in plots. We found that while species richness increased with time, understory biomass decreased. Forbs made up the majority of the species added, while the biomass of graminoids decreased the most over time, suggesting that the reduced dominance of graminoids favored less productive forbs. Species richness and density patterns could be attributed to dispersal limitation, with anemochorous species being more associated with time after restoration than hydrochorous, zoochorous, or vegetatively reproducing species. Using multiple linear regression, we found that time along with riparian slope and riparian buffer width (e.g., distance to logging activities) explained the most variability in species richness, but that variability in total understory biomass was explained primarily by time. The plant community composition of restored reaches differed from that of channelized references, but the difference did not increase over time. Rather, different time categories had different successional trajectories that seemed to converge on a unique climax community for that time period. Given our results, timelines for achieving species richness objectives should be extended to 25 years or longer if recovery is defined as a saturation of the accumulation of species over time. Other recommendations include making riparian slopes as gentle as possible given the landscape context and expanding riparian buffer width for restoration to have as much impact as possible.
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| 17. |
- Hasselquist, Sten, et al.
(författare)
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APOGEE Chemical Abundance Patterns of the Massive Milky Way Satellites
- 2021
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Ingår i: Astrophysical Journal. - : American Astronomical Society. - 0004-637X .- 1538-4357. ; 923:2
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Tidskriftsartikel (refereegranskat)abstract
- The SDSS-IV Apache Point Observatory Galactic Evolution Experiment (APOGEE) survey has obtained high-resolution spectra for thousands of red giant stars distributed among the massive satellite galaxies of the Milky Way (MW): the Large and Small Magellanic Clouds (LMC/SMC), the Sagittarius Dwarf Galaxy (Sgr), Fornax (Fnx), and the now fully disrupted Gaia Sausage/Enceladus (GSE) system. We present and analyze the APOGEE chemical abundance patterns of each galaxy to draw robust conclusions about their star formation histories, by quantifying the relative abundance trends of multiple elements (C, N, O, Mg, Al, Si, Ca, Fe, Ni, and Ce), as well as by fitting chemical evolution models to the [α/Fe]-[Fe/H] abundance plane for each galaxy. Results show that the chemical signatures of the starburst in the Magellanic Clouds (MCs) observed by Nidever et al. in the α-element abundances extend to C+N, Al, and Ni, with the major burst in the SMC occurring some 3-4 Gyr before the burst in the LMC. We find that Sgr and Fnx also exhibit chemical abundance patterns suggestive of secondary star formation epochs, but these events were weaker and earlier (∼5-7 Gyr ago) than those observed in the MCs. There is no chemical evidence of a second starburst in GSE, but this galaxy shows the strongest initial star formation as compared to the other four galaxies. All dwarf galaxies had greater relative contributions of AGB stars to their enrichment than the MW. Comparing and contrasting these chemical patterns highlight the importance of galaxy environment on its chemical evolution.
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| 18. |
- Hasselquist, Sten, et al.
(författare)
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Exploring the stellar age distribution of the milky way bulge using APOGEE
- 2020
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Ingår i: Astrophysical Journal. - : American Astronomical Society. - 0004-637X .- 1538-4357. ; 901:2
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Tidskriftsartikel (refereegranskat)abstract
- We present stellar age distributions of the Milky Way bulge region using ages for ∼6000 high-luminosity (log(g)< 2.0), metal-rich ([Fe/H] ≥ -0.5) bulge stars observed by the Apache Point Observatory Galactic Evolution Experiment. Ages are derived using The Cannon label-transfer method, trained on a sample of nearby luminous giants with precise parallaxes for which we obtain ages using a Bayesian isochrone-matching technique. We find that the metal-rich bulge is predominantly composed of old stars (>8 Gyr). We find evidence that the planar region of the bulge (ZGC| 0.25 kpc) is enriched in metallicity, Z, at a faster rate (dZ/dt ∼ 0.0034 Gyr-1) than regions farther from the plane (dZ/dt ∼ 0.0013 Gyr-1 at | ZGC| > 1.00 kpc). We identify a nonnegligible fraction of younger stars (age ∼2-5 Gyr) at metallicities of +0.2 < [Fe/H] < +0.4. These stars are preferentially found in the plane (ZGC| ≤ 0.25 kpc) and at R cy ≈ 2-3 kpc, with kinematics that are more consistent with rotation than are the kinematics of older stars at the same metallicities. We do not measure a significant age difference between stars found inside and outside the bar. These findings show that the bulge experienced an initial starburst that was more intense close to the plane than far from the plane. Then, star formation continued at supersolar metallicities in a thin disk at 2 kpc ≲ R cy ≲ 3 kpc until ∼2 Gyr ago.
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| 19. |
- Maher Hasselquist, Eliza, et al.
(författare)
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Time for recovery of riparian plants in restored northern Swedish streams : a chronosequence study
- 2015
-
Ingår i: Ecological Applications. - : Ecological Society of America. - 1051-0761 .- 1939-5582. ; 25:5, s. 1373-1389
-
Tidskriftsartikel (refereegranskat)abstract
- A lack of ecological responses in stream restoration projects has been prevalent throughout recent literature with many studies reporting insufficient time for recovery. We assessed the relative importance of time, site variables, and landscape setting for understanding how plant species richness and understory productivity recover over time in riparian zones of northern Swedish streams. We used a space-for-time substitution consisting of 13 stream reaches restored 5-25 years ago, as well as five unrestored channelized reference reaches. We inventoried the riparian zone for all vascular plant species along 60-m study reaches and quantified cover and biomass in plots. We found that while species richness increased with time, understory biomass decreased. Forbs made up the majority of the species added, while the biomass of graminoids decreased the most over time, suggesting that the reduced dominance of graminoids favored less productive forbs. Species richness and density patterns could be attributed to dispersal limitation, with anemochorous species being more associated with time after restoration than hydrochorous, zoochorous, or vegetatively reproducing species. Using multiple linear regression, we found that time along with riparian slope and riparian buffer width (e.g., distance to logging activities) explained the most variability in species richness, but that variability in total understory biomass was explained primarily by time. The plant community composition of restored reaches differed from that of channelized references, but the difference did not increase over time. Rather, different time categories had different successional trajectories that seemed to converge on a unique climax community for that time period. Given our results, timelines for achieving species richness objectives should be extended to 25 years or longer if recovery is defined as a saturation of the accumulation of species over time. Other recommendations include making riparian slopes as gentle as possible given the landscape context and expanding riparian buffer width for restoration to have as much impact as possible.
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| 20. |
- Mendes, L, et al.
(författare)
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Variation in the innate and acquired arms of the immune system among five shorebird species
- 2006
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Ingår i: Journal of Experimental Biology. - : The Company of Biologists. - 1477-9145 .- 0022-0949. ; 209:2, s. 284-291
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)abstract
- To contribute to an understanding of the evolutionary processes that shape variation in immune responses, we compared several components of the innate and acquired arms of the immune system in five related, but ecologically diverse, migratory shorebirds (ruff Philomachus pugnax L., ruddy turnstone Arenaria interpres L., bar-tailed godwit Limosa lapponica L., sanderling Calidris alba Pallas and red knot C. canutus L.). We used a hemolysis-hemagglutination assay in free-living shorebirds to assess two of the innate components (natural antibodies and complement-mediated lysis), and a modified quantitative enzyme-linked immunosorbent assay in birds held in captivity to assess the acquired component (humoral antibodies against tetanus and diphtheria toxoid) of immunity. Ruddy turnstones showed the highest levels of both innate and acquired immune responses. We suggest that turnstones could have evolved strong immune responses because they scavenge among rotting organic material on the seashore, where they might be exposed to a particularly broad range of pathogens. Although ruffs stand out among shorebirds in having a high prevalence of avian malaria, they do not exhibit higher immune response levels. Our results indicate that relationships between immune response and infection are not likely to follow a broad general pattern, but instead depend on type of parasite exposure, among other factors.
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| 21. |
- Metcalfe, Daniel B., et al.
(författare)
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Patchy field sampling biases understanding of climate change impacts across the Arctic
- 2018
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Ingår i: Nature Ecology and Evolution. - : Springer Science and Business Media LLC. - 2397-334X. ; 2:9, s. 1443-1448
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Tidskriftsartikel (refereegranskat)abstract
- Effective societal responses to rapid climate change in the Arctic rely on an accurate representation of region-specific ecosystem properties and processes. However, this is limited by the scarcity and patchy distribution of field measurements. Here, we use a comprehensive, geo-referenced database of primary field measurements in 1,840 published studies across the Arctic to identify statistically significant spatial biases in field sampling and study citation across this globally important region. We find that 31% of all study citations are derived from sites located within 50 km of just two research sites: Toolik Lake in the USA and Abisko in Sweden. Furthermore, relatively colder, more rapidly warming and sparsely vegetated sites are under-sampled and under-recognized in terms of citations, particularly among microbiology-related studies. The poorly sampled and cited areas, mainly in the Canadian high-Arctic archipelago and the Arctic coastline of Russia, constitute a large fraction of the Arctic ice-free land area. Our results suggest that the current pattern of sampling and citation may bias the scientific consensuses that underpin attempts to accurately predict and effectively mitigate climate change in the region. Further work is required to increase both the quality and quantity of sampling, and incorporate existing literature from poorly cited areas to generate a more representative picture of Arctic climate change and its environmental impacts.
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| 22. |
- Nidever, David L., et al.
(författare)
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The Lazy Giants : APOGEE Abundances Reveal Low Star Formation Efficiencies in the Magellanic Clouds
- 2020
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Ingår i: Astrophysical Journal. - : Institute of Physics (IOP). - 0004-637X .- 1538-4357. ; 895:2
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Tidskriftsartikel (refereegranskat)abstract
- We report the first APOGEE metallicities and alpha-element abundances measured for 3600 red giant stars spanning a large radial range of both the Large (LMC) and Small Magellanic Clouds, the largest Milky Way (MW) dwarf galaxies. Our sample is an order of magnitude larger than that of previous studies and extends to much larger radial distances. These are the first results presented that make use of the newly installed southern APOGEE instrument on the du Pont telescope at Las Campanas Observatory. Our unbiased sample of the LMC spans a large range in metallicity, from [Fe/H] = -0.2 to very metal-poor stars with [Fe/H] -2.5, the most metal-poor Magellanic Cloud (MC) stars detected to date. The LMC [alpha/Fe]-[Fe/H] distribution is very flat over a large metallicity range but rises by similar to 0.1 dex at -1.0 < [Fe/H] less than or similar to -0.5. We interpret this as a sign of the known recent increase in MC star formation activity and are able to reproduce the pattern with a chemical evolution model that includes a recent "starburst." At the metal-poor end, we capture the increase of [alpha/Fe] with decreasing [Fe/H] and constrain the "alpha-knee" to [Fe/H] less than or similar to -2.2 in both MCs, implying a low star formation efficiency of similar to 0.01 Gyr(-1). The MC knees are more metal-poor than those of less massive MW dwarf galaxies such as Fornax, Sculptor, or Sagittarius. One possible interpretation is that the MCs formed in a lower-density environment than the MW, a hypothesis that is consistent with the paradigm that the MCs fell into the MW's gravitational potential only recently.
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| 23. |
- Nilsson, Christer, et al.
(författare)
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Riparian and in-stream restoration of boreal streams and rivers : success or failure?
- 2015
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Ingår i: Ecohydrology. - : Wiley-Blackwell. - 1936-0584 .- 1936-0592. ; 8:5, s. 753-764
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Tidskriftsartikel (refereegranskat)abstract
- We reviewed follow-up studies from Finnish and Swedish streams that have been restored after timber floating to assess the abiotic and biotic responses to restoration. More specifically, from a review of 18 case studies (16 published and 2 unpublished), we determined whether different taxonomic groups react differently or require different periods of time to respond to the same type of restoration. Restoration entailed returning coarse sediment (cobbles and boulders) and sometimes large wood to previously channelized turbulent reaches, primarily with the objective of meeting habitat requirements of naturally reproducing salmonid fish. The restored streams showed a consistent increase in channel complexity and retention capacity, but the biotic responses were weak or absent in most species groups. Aquatic mosses growing on boulders were drastically reduced shortly after restoration, but in most studies, they recovered after a few years. Riparian plants, macroinvertebrates and fish did not show any consistent trends in response. We discuss seven alternative explanations to these inconsistent results and conclude that two decades is probably too short a time for most organisms to recover. We recommend long-term monitoring using standardized methods, a landscape-scale perspective and a wider range of organisms to improve the basis for judging to what extent restoration in boreal streams has achieved its goal of reducing the impacts from timber floating.
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| 24. |
- Polvi, Lina E., et al.
(författare)
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Potential and actual geomorphic complexity of restored headwater streams in northern Sweden
- 2014
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Ingår i: Geomorphology. - : Elsevier BV. - 0169-555X .- 1872-695X. ; 210, s. 98-118
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Tidskriftsartikel (refereegranskat)abstract
- Stream restoration usually relies on ecological theories presuming that increased habitat heterogeneity leads to higher biodiversity. However, to test this hypothesis a quantitative metric of overall geomorphic complexity is needed. We quantified geomorphic complexity using 29 metrics over five dimensions (sediment distribution, longitudinal profile, cross section, planform, and instream wood) of headwater streams in northern Sweden. We examined reaches with four different restoration statuses after a century of timber floating (channelized, restored, demonstration restored, and unimpacted) to determine (1) whether restoration increases complexity in all dimensions, (2) whether a complexity gradient can be quantified and which metrics can serve as proxies for the gradient, and (3) levels of potential complexity based on large-scale controls (drainage area, glacial legacy sediment, valley slope, valley confinement old-growth forest/buffer zone, and beaver activity). We found a significantly higher complexity in unimpacted and demonstration restoration sites than in channelized sites in all five dimensions except the cross section (based on the two metrics quantifying variability in the cross section). Multivariate analyses were able to elucidate an apparent complexity gradient driven by three complexity metrics: longitudinal roughness, sediment sorting, and cross section chain and tape ratio. The large-scale factors of valley and channel gradient as well as median grain size, along with restoration status, drive differences in complexity composition. Restoring a reach to its potential complexity is beneficial in regions without reference systems or sufficient data to model flow and sediment processes. Unimpacted and demonstration restoration reaches displayed not only more intrareach variability than channelized reaches but also greater interreach heterogeneity in complexity composition, which supports a focus on reach-scale controls on potential complexity and a landscape-scale view on restoration. (C) 2014 Elsevier B.V. All rights reserved.
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| 25. |
- Radchuk, Viktoriia, et al.
(författare)
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Adaptive responses of animals to climate change are most likely insufficient
- 2019
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 10:1
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Tidskriftsartikel (refereegranskat)abstract
- Biological responses to climate change have been widely documented across taxa and regions, but it remains unclear whether species are maintaining a good match between phenotype and environment, i.e. whether observed trait changes are adaptive. Here we reviewed 10,090 abstracts and extracted data from 71 studies reported in 58 relevant publications, to assess quantitatively whether phenotypic trait changes associated with climate change are adaptive in animals. A meta-analysis focussing on birds, the taxon best represented in our dataset, suggests that global warming has not systematically affected morphological traits, but has advanced phenological traits. We demonstrate that these advances are adaptive for some species, but imperfect as evidenced by the observed consistent selection for earlier timing. Application of a theoretical model indicates that the evolutionary load imposed by incomplete adaptive responses to ongoing climate change may already be threatening the persistence of species.
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