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- Niemi, MEK, et al.
(författare)
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- 2021
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swepub:Mat__t
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| 2. |
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| 5. |
- Kanai, M, et al.
(författare)
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- 2023
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swepub:Mat__t
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| 10. |
- Pathan, M., et al.
(författare)
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A novel community driven software for functional enrichment analysis of extracellular vesicles data
- 2017
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Ingår i: Journal of Extracellular Vesicles. - : Wiley. - 2001-3078. ; 6:1
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Tidskriftsartikel (refereegranskat)abstract
- Bioinformatics tools are imperative for the in depth analysis of heterogeneous high-throughput data. Most of the software tools are developed by specific laboratories or groups or companies wherein they are designed to perform the required analysis for the group. However, such software tools may fail to capture "what the community needs in a tool". Here, we describe a novel community-driven approach to build a comprehensive functional enrichment analysis tool. Using the existing FunRich tool as a template, we invited researchers to request additional features and/or changes. Remarkably, with the enthusiastic participation of the community, we were able to implement 90% of the requested features. FunRich enables plugin for extracellular vesicles wherein users can download and analyse data from Vesiclepedia database. By involving researchers early through community needs software development, we believe that comprehensive analysis tools can be developed in various scientific disciplines.
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| 11. |
- Adusei-Fosu, Kwasi, et al.
(författare)
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Evaluating the efficacy of potential fungicide-adjuvant combinations for control of myrtle rust in New Zealand
- 2021
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Ingår i: Journal of Plant Diseases and Protection. - : Springer. - 1861-3829 .- 1861-3837. ; 128, s. 1501-1515
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Tidskriftsartikel (refereegranskat)abstract
- Myrtle rust is a serious fungal disease caused by Austropuccinia psidii affecting a number of Myrtaceae species in New Zealand and elsewhere. Control with fungicides or biologicals provides a mechanism to reduce the build-up of inoculum in the short-term while other strategies are being developed or deployed for long-term management. This study evaluated the efficacy of fungicides for control of myrtle rust under controlled conditions and identified adjuvants that would promote spreading of fungicidal active ingredients across the leaf surface. The spread of fungicide on detached M. excelsa leaves was assessed by applying three different adjuvants in combination with seven fungicides. Subsequently, M. excelsa plants were treated with three fungicides/mixes, (azoxystrobin + epoxiconazole, triademinol or a natural tea-extract) at a single rate followed by inoculation with A. psidii urediniospores on day 0, 7, 14 or 21 days after spraying. The response to infection in M. excelsa plants based on different inoculation timings at days 0, 7 and 21 significantly differed among fungicide treatments. The fungicide azoxystrobin + epoxiconazole was the most effective with infections significantly lower on the adaxial leaf surface than abaxial, despite good surface coverage of fungicide being achieved on both leaf surfaces. There were significant differences among fungicides based on the proportion of infected leaves on M. excelsa plants. Day 21 post-spray inoculation indicated a significant interaction between inoculation time and fungicide on leaf disease ratings. However, this was not the case at either 28 or 35 days post-inoculation. This research contributes to fungicide options for myrtle rust control in New Zealand.
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