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Sökning: WFRF:(Sanyal A)

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1.
  • Adam, A, et al. (författare)
  • Abstracts from Hydrocephalus 2016.
  • 2017
  • Ingår i: Fluids and Barriers of the CNS. - : Springer Science and Business Media LLC. - 2045-8118. ; 14:Suppl 1
  • Tidskriftsartikel (refereegranskat)
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  • Ivanov, Sergey A., et al. (författare)
  • Evolution of the structural and multiferroic properties of PbFe2/3W1/3O3 ceramics upon Mn-doping
  • 2017
  • Ingår i: Materials Chemistry and Physics. - : Elsevier BV. - 0254-0584 .- 1879-3312. ; 187, s. 218-232
  • Tidskriftsartikel (refereegranskat)abstract
    • The perovskite system Pb(Fe1-xMnx)(2/3)W1/3O3 (0 <= x <= 1, PFMWO) has been prepared by conventional solid-state reaction under different sintering conditions. Structures and phase composition as well as thermal, magnetic and dielectric properties of the compounds have been systematically investigated experimentally and by first-principles density functional calculations. A clean perovskite phase is established at room temperature for compositions 0 <= x <= 0.4. Rietveld refinements of X-ray and neutron powder diffraction patterns demonstrate that the compounds crystallize in space group Pm-3m (0 <= x <= 0.4). The degree of ordering of the Fe and W/Mn cations was found to depend on the concentration of Mn. First-principles calculations suggest that the structural properties of PFMWO are strongly influenced by the Jahn Teller effect. The PFMWO compounds behave as relaxor ferroelectrics at weak Mn-doping with a dielectric constant that rapidly decreases with increasing Mn content. A low temperature antiferromagnetic G-type order with propagation vector k = (1/2,1/2,1/2) is derived from neutron powder diffraction data for the samples with x <= 0.4. However with increasing doping concentration, the magnetic order is perturbed. First principles calculations show that the dominant exchange coupling is antiferromagnetic and occurs between nearest neighbor Fe atoms. When the system is doped with Mn, a relatively weak ferromagnetic (FM) interaction between Fe and Mn atoms emerges. However, due to the presence of this FM interaction, the correlation length of the magnetic order is greatly shortened already at rather low doping levels.
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  • Kreutzberger, AJB, et al. (författare)
  • SARS-CoV-2 requires acidic pH to infect cells
  • 2022
  • Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 1091-6490. ; 119:38, s. e2209514119-
  • Tidskriftsartikel (refereegranskat)abstract
    • Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) cell entry starts with membrane attachment and ends with spike (S) protein–catalyzed membrane fusion depending on two cleavage steps, namely, one usually by furin in producing cells and the second by TMPRSS2 on target cells. Endosomal cathepsins can carry out both. Using real-time three-dimensional single-virion tracking, we show that fusion and genome penetration require virion exposure to an acidic milieu of pH 6.2 to 6.8, even when furin and TMPRSS2 cleavages have occurred. We detect the sequential steps of S1-fragment dissociation, fusion, and content release from the cell surface in TMPRRS2-overexpressing cells only when exposed to acidic pH. We define a key role of an acidic environment for successful infection, found in endosomal compartments and at the surface of TMPRSS2-expressing cells in the acidic milieu of the nasal cavity.
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8.
  • Kreutzberger, AJB, et al. (författare)
  • SARS-CoV-2 requires acidic pH to infect cells
  • 2022
  • Ingår i: bioRxiv : the preprint server for biology. - : Cold Spring Harbor Laboratory.
  • Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)abstract
    • SARS-CoV-2 cell entry starts with membrane attachment and ends with spike-protein (S) catalyzed membrane fusion depending on two cleavage steps, one usually by furin in producing cells and the second by TMPRSS2 on target cells. Endosomal cathepsins can carry out both. Using real-time 3D single virion tracking, we show fusion and genome penetration requires virion exposure to an acidic milieu of pH 6.2-6.8, even when furin and TMPRSS2 cleavages have occurred. We detect the sequential steps of S1-fragment dissociation, fusion, and content release from the cell surface in TMPRRS2 overexpressing cells only when exposed to acidic pH. We define a key role of an acidic environment for successful infection, found in endosomal compartments and at the surface of TMPRSS2 expressing cells in the acidic milieu of the nasal cavity.Significance StatementInfection by SARS-CoV-2 depends upon the S large spike protein decorating the virions and is responsible for receptor engagement and subsequent fusion of viral and cellular membranes allowing release of virion contents into the cell. Using new single particle imaging tools, to visualize and track the successive steps from virion attachment to fusion, combined with chemical and genetic perturbations of the cells, we provide the first direct evidence for the cellular uptake routes of productive infection in multiple cell types and their dependence on proteolysis of S by cell surface or endosomal proteases. We show that fusion and content release always require the acidic environment from endosomes, preceded by liberation of the S1 fragment which depends on ACE2 receptor engagement.One sentence summaryDetailed molecular snapshots of the productive infectious entry pathway of SARS-CoV-2 into cells
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9.
  • Kreutzberger, AJB, et al. (författare)
  • SARS-CoV-2 requires acidic pH to infect cells
  • 2022
  • Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 1091-6490. ; 119:38, s. e2209514119-
  • Tidskriftsartikel (refereegranskat)abstract
    • Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) cell entry starts with membrane attachment and ends with spike (S) protein–catalyzed membrane fusion depending on two cleavage steps, namely, one usually by furin in producing cells and the second by TMPRSS2 on target cells. Endosomal cathepsins can carry out both. Using real-time three-dimensional single-virion tracking, we show that fusion and genome penetration require virion exposure to an acidic milieu of pH 6.2 to 6.8, even when furin and TMPRSS2 cleavages have occurred. We detect the sequential steps of S1-fragment dissociation, fusion, and content release from the cell surface in TMPRRS2-overexpressing cells only when exposed to acidic pH. We define a key role of an acidic environment for successful infection, found in endosomal compartments and at the surface of TMPRSS2-expressing cells in the acidic milieu of the nasal cavity.
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  • Akansel, Serkan, et al. (författare)
  • Enhanced Gilbert damping in Re-doped FeCo films : Combined experimental and theoretical study
  • 2019
  • Ingår i: Physical Review B. - 2469-9950 .- 2469-9969. ; 99:17
  • Tidskriftsartikel (refereegranskat)abstract
    • The effects of rhenium doping in the range 0-10 at.% on the static and dynamic magnetic properties of Fe65Co35 thin films have been studied experimentally as well as with first-principles electronic structure calculations focusing on the change of the saturation magnetization (M-s) and the Gilbert damping parameter (alpha). Both experimental and theoretical results show that M-s decreases with increasing Re-doping level, while at the same time alpha increases. The experimental low temperature saturation magnetic induction exhibits a 29% decrease, from 2.31 to 1.64 T, in the investigated doping concentration range, which is more than predicted by the theoretical calculations. The room temperature value of the damping parameter obtained from ferromagnetic resonance measurements, correcting for extrinsic contributions to the damping, is for the undoped sample 2.1 x 10(-3), which is close to the theoretically calculated Gilbert damping parameter. With 10 at.% Re doping, the damping parameter increases to 7.8 x 10(-3), which is in good agreement with the theoretical value of 7.3 x 10(-3). The increase in damping parameter with Re doping is explained by the increase in the density of states at the Fermi level, mostly contributed by the spin-up channel of Re. Moreover, both experimental and theoretical values for the damping parameter weakly decrease with decreasing temperature.
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12.
  • Bergqvist, Lars, 1976-, et al. (författare)
  • Magnetic and electronic structure of (Ga1-xMnx)As
  • 2003
  • Ingår i: Physical Review B. Condensed Matter and Materials Physics. - 1098-0121 .- 1550-235X. ; 67:20, s. 205201-
  • Tidskriftsartikel (refereegranskat)abstract
    • We present theoretical calculations of the magnetic and electronic structure of Mn-doped GaAs (in the zinc-blende structure). The magnetic properties are shown to be very sensitive to structural defects, in particular, As antisite defects and Mn at interstitial positions. Only when considering such defects can the experimental magnetic moments be reproduced by first-principles theory. We present a simple model for understanding the connection between the magnetic ordering and the As antisites, and the way in which the defects help to stabilize a partial disordered local-moment state. The connection between the energetics of the Mn substitution and the As antisite concentration is also analyzed. In addition, we compare the calculated magnetic properties and electronic structures of Mn situated on substitutional sites (Mn replacing a Ga atom) and on interstitial sites, where in agreement with observations the interstitial site is found to be less favorable. Finally, combining our first-principles calculations of the spin-wave excitation energies with a classical Heisenberg Hamiltonian we have calculated interatomic exchange interactions, and using Monte Carlo simulations we present theoretical values of the critical temperature as a function of Mn concentration.
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13.
  • Husain, S., et al. (författare)
  • Large Dzyaloshinskii-Moriya interaction and atomic layer thickness dependence in a ferromagnet- WS2 heterostructure
  • 2022
  • Ingår i: Physical Review B. - : American Physical Society. - 2469-9950 .- 2469-9969. ; 105:6
  • Tidskriftsartikel (refereegranskat)abstract
    • Two-dimensional transition metal dichalcogenides (TMDs) have immense potential for spintronics applications. Here, we report atomic layer thickness dependence in WS2/Co3FeB heterostructures. The layer dependence is predicted by density functional theory and demonstrated experimentally by the layer dependence of the Dzyaloshinskii-Moriya interaction (DMI). Notably, we have observed the DMI in WS2 to be larger than that for heavy metals such as W and Ta, which is important to stabilize chiral structures. Inversion symmetry is not preserved with an odd number of layers, while it exists with an even number of layers. This symmetry rule is reflected in the temperature dependence of the effective damping parameter of the heterostructure. That the damping parameter decreases (increases) in odd (even) layers can be resolved at low temperature. This suggests that the layer dependence has its origin at the WS2 interface, where the spin-valley coupling and spin-orbit coupling activate these features. Large DMI, pure spin current, and unique layer dependence in TMDs provide valuable information and fundamental understanding for designing TMD-based quantum information storage devices. © 2022 American Physical Society.
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16.
  • Banerjee, Mitali, et al. (författare)
  • Magnetism in FeNiW disordered alloys : Experiment and theory
  • 2010
  • Ingår i: Journal of Magnetism and Magnetic Materials. - : Elsevier BV. - 0304-8853 .- 1873-4766. ; 322:21, s. 3558-3564
  • Tidskriftsartikel (refereegranskat)abstract
    • We report here an experimental study of magnetization of FeNiW alloys at different compositions. We have studied variation of magnetization with temperature (at low external fields) and magnetic field (at low temperatures). The alloy shows para to ferromagnetic transitions across the composition range. We do not find any indication of the spin-glass phase. We have supplemented the experimental work with theoretical analysis using the first-principles tight-binding linear muffin-tin orbitals based augmented space recursion method. Our theoretical estimates of magnetic moment and Curie temperatures agree well with experiment. Our mean-field phase analysis also does not indicate the possibility of a spin-glass.
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  • Banerjee, Mitali, et al. (författare)
  • Magnetism in NiFeMo disordered alloys : Experiment and theory
  • 2010
  • Ingår i: Physica. B, Condensed matter. - : Elsevier BV. - 0921-4526 .- 1873-2135. ; 405:20, s. 4287-4293
  • Tidskriftsartikel (refereegranskat)abstract
    • In this communication we carry out experimental investigation of the behavior of magnetization with temperature and magnetic field of six samples at different compositions of the disordered ternary alloy NiFeMo. We analyze the data using a fist-principles density functional based electronic structure method and a mean-field phase diagram study.
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18.
  • Banerjee, Rudra, et al. (författare)
  • Fe3.3Ni83.2Mo13.5 : a likely candidate to show spin-glass behaviour at low temperatures
  • 2011
  • Ingår i: Journal of Physics. - : IOP Publishing. - 0953-8984 .- 1361-648X. ; 23:10, s. 106002-
  • Tidskriftsartikel (refereegranskat)abstract
    • Unlike other transition metals alloyed with a non-magnetic metal, alloys of Ni behave rather differently. This is because of the fragility of the local magnetic moment on Ni. NiMo and NiW do not show any spin-glass phase. However, addition of Fe can bolster the moment on Ni. We wish to study whether the alloy Fe3.3Ni83.2Mo13.5, chosen near a composition where mean-field estimates suggest there could be a spin-glass phase, shows such a phase or not.
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  • Ivanov, Sergey A, et al. (författare)
  • Polar Order and Frustrated Antiferromagnetism in Perovskite Pb2MnWO6 Single Crystals.
  • 2016
  • Ingår i: Inorganic Chemistry. - : American Chemical Society (ACS). - 0020-1669 .- 1520-510X. ; 55:6, s. 2791-2805
  • Tidskriftsartikel (refereegranskat)abstract
    • Single crystals of the multiferroic double-perovskite Pb2MnWO6 have been synthesized and their structural, thermal, magnetic and dielectric properties studied in detail. Pure perovskite-phase formation and stoichiometric chemical composition of the as-grown crystals are confirmed by X-ray single-crystal and powder diffraction techniques as well as energy-dispersive X-ray and inductively coupled plasma mass spectrometry. Detailed structural analyses reveal that the crystals experience a structural phase transition from the cubic space group (s.g.) Fm3̅m to an orthorhombic structure in s.g. Pn21a at about 460 K. Dielectric data suggest that a ferrielectric phase transition takes place at that same temperature, in contrast to earlier results on polycrystalline samples, which reported a transition to s.g. Pnma and an antiferroelectric low-temperature phase. Magnetic susceptibility measurements indicate that a frustrated antiferromagnetic phase emerges below 8 K. Density functional theory based calculations confirm that the cationic order between Mn and W is favorable. The lowest total energy was found for an antiferromagnetically ordered state. However, analyses of the calculated exchange parameters revealed strongly competing antiferromagnetic interactions. The large distance between the magnetic atoms, together with magnetic frustration, is shown to be the main reason for the low value of the ordering temperature observed experimentally. We discuss the structure-property relationships in Pb2MnWO6 and compare these observations to reported results on related Pb2BWO6 perovskites with different B cations.
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23.
  • Ivanov, Sergey, et al. (författare)
  • Partial cation ordering, relaxor ferroelectricity, and ferrimagnetism in Pb(Fe1-xYbx)(2/3)W1/3O3 solid solutions
  • 2020
  • Ingår i: Journal of Applied Physics. - : AMER INST PHYSICS. - 0021-8979 .- 1089-7550. ; 128:13
  • Tidskriftsartikel (refereegranskat)abstract
    • The structural, magnetic, and dielectric properties of ceramic samples of Yb-doped PbFe2/3W1/3O3 have been investigated by a variety of methods including x-ray powder diffraction, magnetometry, and dielectric spectroscopy. In addition, theoretical investigations were made using first-principles density functional calculations. All the doped samples Pb(Fe1-xYbx)(2/3)W1/3O3 (PFYWO) (0.1 <= x <= 0.5) were found to crystallize in an ordered cubic ( F m 3 m ) structure with partial ordering in the B-perovskite sites. Observed changes in the cationic order were accompanied by differences in the dielectric and magnetic responses of the system. While pure PbFe2/3W1/3O3 is antiferromagnetic, the doped Pb(Fe1-xYbx)(2/3)W1/3O3 PFYWO samples display excess moments and ferrimagnetic-like behavior, associated with differences in B ' and B '' site occupancies of the magnetic Fe3+ cations. The magnetic transition temperature of the ferrimagnetic phase is found to decrease with increasing Yb content, from T-N similar to 350K of the undoped sample down to 137K for x=0.5. All PFYWO compounds display a ferroelectric relaxor behavior akin to that of PbFe2/3W1/3O3, albeit our results show significant changes of the frequency and temperature dependence of the dielectric properties. The changes of the properties of PFYWO with increasing Yb substitution can be explained by the changes in the cation size/charge mismatch and the size difference of the two ordered positions.
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24.
  • Lo, Min-Tzu, et al. (författare)
  • Genome-wide analyses for personality traits identify six genomic loci and show correlations with psychiatric disorders
  • 2017
  • Ingår i: Nature Genetics. - : Springer Science and Business Media LLC. - 1061-4036 .- 1546-1718. ; 49:1, s. 152-156
  • Tidskriftsartikel (refereegranskat)abstract
    • Personality is influenced by genetic and environmental factors(1) and associated with mental health. However, the underlying genetic determinants are largely unknown. We identified six genetic loci, including five novel loci(2,3), significantly associated with personality traits in a meta-analysis of genome-wide association studies (N = 123,132-260,861). Of these genome-wide significant loci, extraversion was associated with variants in WSCD2 and near PCDH15, and neuroticism with variants on chromosome 8p23.1 and in L3MBTL2. We performed a principal component analysis to extract major dimensions underlying genetic variations among five personality traits and six psychiatric disorders (N = 5,422-18,759). The first genetic dimension separated personality traits and psychiatric disorders, except that neuroticism and openness to experience were clustered with the disorders. High genetic correlations were found between extraversion and attention-deficit- hyperactivity disorder (ADHD) and between openness and schizophrenia and bipolar disorder. The second genetic dimension was closely aligned with extraversion-introversion and grouped neuroticism with internalizing psychopathology (e.g., depression or anxiety).
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25.
  • Lo, Min-Tzu, et al. (författare)
  • Modeling prior information of common genetic variants improves gene discovery for neuroticism
  • 2017
  • Ingår i: Human Molecular Genetics. - : OXFORD UNIV PRESS. - 0964-6906 .- 1460-2083. ; 26:22, s. 4530-4539
  • Tidskriftsartikel (refereegranskat)abstract
    • Neuroticism reflects emotional instability, and is related to various mental and physical health issues. However, the majority of genetic variants associated with neuroticism remain unclear. Inconsistent genetic variants identified by different genome-wide association studies (GWAS) may be attributable to low statistical power. We proposed a novel framework to improve the power for gene discovery by incorporating prior information of single nucleotide polymorphisms (SNPs) and combining two relevant existing tools, relative enrichment score (RES) and conditional false discovery rate (FDR). Here, SNP's conditional FDR was estimated given its RES based on SNP prior information including linkage disequilibrium (LD)-weighted genic annotation scores, total LD scores and heterozygosity. A known significant locus in chromosome 8p was excluded before estimating FDR due to long-range LD structure. Only one significant LD-independent SNP was detected by analyses of unconditional FDR and traditional GWAS in the discovery sample (N = 59 225), and notably four additional SNPs by conditional FDR. Three of the five SNPs, all identified by conditional FDR, were replicated (P < 0.05) in an independent sample (N = 170 911). These three SNPs are located in intronic regions of CADM2, LINGO2 and EP300 which have been reported to be associated with autism, Parkinson's disease and schizophrenia, respectively. Our approach using a combination of RES and conditional FDR improved power of traditional GWAS for gene discovery providing a useful framework for the analysis of GWAS summary statistics by utilizing SNP prior information, and helping to elucidate the links between neuroticism and complex diseases from a genetic perspective.
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