| 1. |
- Clark, M. S., et al.
(författare)
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Multi-omics for studying and understanding polar life
- 2023
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Ingår i: Nature Communications. - : NATURE PORTFOLIO. - 2041-1723. ; 14
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Tidskriftsartikel (refereegranskat)abstract
- Polar ecosystems are experiencing amongst the most rapid rates of regional warming on Earth. Here, we discuss ‘omics’ approaches to investigate polar biodiversity, including the current state of the art, future perspectives and recommendations. We propose a community road map to generate and more fully exploit multi-omics data from polar organisms. These data are needed for the comprehensive evaluation of polar biodiversity and to reveal how life evolved and adapted to permanently cold environments with extreme seasonality. We argue that concerted action is required to mitigate the impact of warming on polar ecosystems via conservation efforts, to sustainably manage these unique habitats and their ecosystem services, and for the sustainable bioprospecting of novel genes and compounds for societal gain.
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| 2. |
- Lundholm, N., et al.
(författare)
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Induction of domoic acid production in diatoms-Types of grazers and diatoms are important
- 2018
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Ingår i: Harmful Algae. - : Elsevier BV. - 1568-9883. ; 79, s. 64-73
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Tidskriftsartikel (refereegranskat)abstract
- Grazers can induce toxin (domoic acid, DA) production in diatoms. The toxic response has been observed in two species of Pseudo-nitzschia and was induced by Calanus copepods. In this study, interactions between diatoms and copepods were further explored using different species of diatoms and copepods. All herbivorous copepods induced toxin production, whereas exposure to carnivorous copepods did not. In line with this, increasing the number of herbivorous copepods resulted in even higher toxin production. The induced response is thus only elicited by copepods that pose a real threat to the responding cells, which supports that the induced toxin production in diatoms evolved as an inducible defense. The cellular toxin content in Pseudo-nitzschia was positively correlated to the concentration of a group of specific polar lipids called copepodamides that are excreted by the copepods. This suggests that copepodamides are the chemical cues responsible for triggering the toxin production. Carnivorous copepods were found to produce less or no copepodamides. Among the diatoms exposed to grazing herbivorous copepods, only two of six species of Pseudo-nitzschia and none of the Nitzschia or Fragilariopsis strains responded by producing DA, indicating that not all Pseudo-nitzschia species/strains are able to produce DA, and that different diatom species might have different strategies for coping with grazing pressure. Growth rate was negatively correlated to cellular domoic acid content indicating an allocation cost associated with toxin production. Long-term grazing experiments showed higher mortality rates of grazers fed toxic diatoms, supporting the hypothesis that DA production is an induced defense mechanism.
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| 3. |
- Wohlrab, S., et al.
(författare)
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Ocean acidification increases domoic acid contents during a spring to summer succession of coastal phytoplankton
- 2020
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Ingår i: Harmful Algae. - : Elsevier BV. - 1568-9883. ; 92
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Tidskriftsartikel (refereegranskat)abstract
- Enrichment of the oceans with CO2 may be beneficial for some marine phytoplankton, including harmful algae. Numerous laboratory experiments provided valuable insights into the effects of elevated pCO(2) on the growth and physiology of harmful algal species, including the production of phycotoxins. Experiments close to natural conditions are the next step to improve predictions, as they consider the complex interplay between biotic and abiotic factors that can confound the direct effects of ocean acidification. We therefore investigated the effect of ocean acidification on the occurrence and abundance of phycotoxins in bulk plankton samples during a long-term mesocosm experiment in the Gullmar Fjord, Sweden, an area frequently experiencing harmful algal blooms. During the experimental period, a total of seven phycotoxin-producing harmful algal genera were identified in the fjord, and in accordance, six toxin classes were detected. However, within the mesocosms, only domoic acid and the corresponding producer Pseudo-nitzschia spp. was observed. Despite high variation within treatments, significantly higher particulate domoic acid contents were measured in the mesocosms with elevated pCO(2). Higher particulate domoic acid contents were additionally associated with macronutrient limitation. The risks associated with potentially higher phycotoxin levels in the future ocean warrants attention and should be considered in prospective monitoring strategies for coastal marine waters.
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| 4. |
- Bucaioni, A., et al.
(författare)
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Aligning Architecture with Business Goals in the Automotive Domain
- 2021
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Ingår i: 2021 IEEE 18th International Conference on Software Architecture (ICSA) 22-26 March 2021, Stuttgart, Germany. - : IEEE. - 9781728162607
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Konferensbidrag (refereegranskat)abstract
- When designing complex automotive systems in practice, employed technologies and architectural decisions need to reflect business goals. While the software architecture community has acknowledged the need to align business goals with architectural decisions, there is a lack of practical approaches to achieve this alignment. In this paper, we intend to close this gap by providing a systematic approach for architecture-business alignment. The approach describes how to align architecture with business concerns by eliciting goals, identifying quality attributes, and deriving architectural tactics. We iteratively developed and evaluated the approach together with an international automotive manufacturer. We show the application of the proposed approach within our participating company leveraging a use case related to software-over-the-air technologies. The proposed approach is perceived as beneficial by our participants, since it provides a structured mechanism to align architecture and business goals by determining key architectural concerns as quality attributes and tactics.
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| 5. |
- Selander, Erik, 1973, et al.
(författare)
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Fight and flight in dinoflagellates? Kinetics of simultaneous grazer-induced responses in Alexandrium tamarense
- 2012
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Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 57:1, s. 58-64
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Tidskriftsartikel (refereegranskat)abstract
- We monitored the kinetics of grazer-induced responses in the marine dinoflagellate Alexandrium tamarense. Chemical cues from each of three calanoid copepods (Calanus sp., Centropages typicus, and Acartia tonsa) induced increased toxicity and suppressed chain formation in A. tamarense. Both chemical and morphological responses augmented over 3 d. Toxicity subsequently averaged 299% higher than controls, and average biovolume 24% lower than controls because of suppression of chain formation in grazed treatments. Grazer-induced toxicity returned to control levels after approximately 11 d, equivalent to five cell divisions, and average biovolume returned to control levels within 1 to 4 d (one to two cell divisions). This suggests that dinoflagellates simultaneously reduce grazer encounter rates and increase chemical defense levels in the presence of copepod grazers. Media replacement experiments showed that the inducing cue(s) attenuate rapidly in seawater, which allows A. tamarense to adjust resource allocation to grazer-induced responses to follow fluctuations in grazer density. Grazer-induced responses, however, develop too slowly to be accounted for in short-term grazing experiments with laboratory cultures.
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| 6. |
- Wohlrab, S., et al.
(författare)
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Predator cues reduce intraspecific trait variability in a marine dinoflagellate
- 2017
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Ingår i: Bmc Ecology. - : Springer Science and Business Media LLC. - 1472-6785. ; 17:1
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Tidskriftsartikel (refereegranskat)abstract
- Background: Phenotypic plasticity is commonplace and enables an organism to respond to variations in the environment. Plastic responses often modify a suite of traits and can be triggered by both abiotic and biotic changes. Here we analysed the plastic response towards a grazer of two genotypes of the marine dinoflagellate Alexandrium fundyense, evaluated the similarity of this response and discuss potential strain-specific trade-offs. We compared the expression of the known inducible defensive traits paralytic shellfish toxin content, and chain length. The effectiveness of the induced defense was assessed by monitoring grazing rates in both strains. Results: Our results show that the grazer cues diminish phenotypic variability in a population by driving the phenotype towards a common defended morphotype. We further showed that the expression of the sxtA gene that initiates the paralytic shellfish toxin biosynthesis pathway does not correlate with an observed increase in the paralytic shellfish toxin analogue saxitoxin, and that toxin induction differs in its physiological characteristics in both strains. Conclusion: Induced defense response in Alexandrium thus can directly affect further species interactions by reducing phenotypic variation and can result in genotype-dependent ecological trade-offs. © 2017 The Author(s).
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