| 1. |
- Alatalo, J. M., et al.
(författare)
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Bryophyte cover and richness decline after 18 years of experimental warming in alpine Sweden
- 2020
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Ingår i: Aob Plants. - Oxford : Oxford University Press (OUP). - 2041-2851. ; 12:6
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Tidskriftsartikel (refereegranskat)abstract
- Climate change is expected to affect alpine and Arctic tundra communities. Most previous long-term studies have focused on impacts on vascular plants, this study examined impacts of long-term warming on bryophyte communities. Experimental warming with open-top chambers (OTCs) was applied for 18 years to a mesic meadow and a dry heath alpine plant community. Species abundance was measured in 1995, 1999, 2001 and 2013. Species composition changed significantly from original communities in the heath, but remained similar in mesic meadow. Experimental warming increased beta diversity in the heath. Bryophyte cover and species richness both declined with long-term warming, while Simpson diversity showed no significant responses. Over the 18-year period, bryophyte cover in warmed plots decreased from 43 % to 11 % in heath and from 68 % to 35 % in meadow (75 % and 48 % decline, respectively, in original cover), while richness declined by 39 % and 26 %, respectively. Importantly, the decline in cover and richness first emerged after 7 years. Warming caused significant increase in litter in both plant communities. Deciduous shrub and litter cover had negative impact on bryophyte cover. We show that bryophyte species do not respond similarly to climate change. Total bryophyte cover declined in both heath and mesic meadow under experimental long-term warming (by 1.5-3 degrees C), driven by general declines in many species. Principal response curve, cover and richness results suggested that bryophytes in alpine heath are more susceptible to warming than in meadow, supporting the suggestion that bryophytes may be less resistant in drier environments than in wetter habitats. Species loss was slower than the decline in bryophyte abundance, and diversity remained similar in both communities. Increased deciduous shrub and litter cover led to decline in bryophyte cover. The non-linear response to warming over time underlines the importance of long-term experiments and monitoring.
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| 2. |
- Auffret, Alistair, et al.
(författare)
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Can field botany be effectively taught as a distance course? Experiences and reflections from the COVID-19 pandemic
- 2022
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Ingår i: AoB PLANTS. - : Oxford University Press (OUP). - 2041-2851. ; 14
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Tidskriftsartikel (refereegranskat)abstract
- The COVID-19 pandemic that started in 2020 forced a rapid change in university teaching, with large numbers of courses switching to distance learning with very little time for preparation. Courses involving many practical elements and field excursions required particular care if students were to fulfil planned learning outcomes. Here, we present our experiences in teaching field botany in 2020 and 2021. Using a range of methods and tools to introduce students to the subject, promote self-learning and reflection and give rapid and regular feedback, we were able to produce a course that allowed students to achieve the intended learning outcomes and that obtained similarly positive student evaluations to previous years. The course and its outcomes were further improved in 2021. We describe how we structured field botany as a distance course in order that we could give the best possible learning experience for the students. Finally, we reflect on how digital tools can aid teaching such subjects in the future, in a world where public knowledge of natural history is declining.In an era of large-scale biodiversity change and reductions in basic knowledge of natural history, it is important that practical courses in subjects like field botany continue to be taught effectively. Forced by the COVID-19 pandemic to teach plant identification with no direct contact with students, we used a range of methods and tools to promote self-learning and reflection in students, and to facilitate rapid feedback by teachers. Here, we present our method for producing a course that allowed students to achieve the intended learning outcomes and that obtained positive student evaluations.
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| 3. |
- Baruch, Zdravko, et al.
(författare)
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Functional acclimation across microgeographic scales in Dodonaea viscosa
- 2018
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; 10:3
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Tidskriftsartikel (refereegranskat)abstract
- Intraspecific plant functional trait variation provides mechanistic insight into persistence and can infer population adaptive capacity. However, most studies explore intraspecific trait variation in systems where geographic and environmental distances co-vary. Such a design reduces the certainty of trait-environment associations, and it is imperative for studies that make trait-environment associations be conducted in systems where environmental distance varies independently of geographic distance. Here we explored trait variation in such a system, and aimed to: (i) quantify trait variation of parent and offspring generations, and associate this variation to parental environments; (ii) determine the traits which best explain population differences; (iii) compare parent and offspring trait-trait relationships. We characterized 15 plant functional traits in eight populations of a shrub with a maximum separation ca. 100 km. Populations differed markedly in aridity and elevation, and environmental distance varied independently of geographic distance. We measured traits in parent populations collected in the field, as well as their offspring reared in greenhouse conditions. Parent traits regularly associated with their environment. These associations were largely lost in the offspring generation, indicating considerable phenotypic plasticity. An ordination of parent traits showed clear structure with strong influence of leaf area, specific leaf area, stomatal traits, isotope delta C-13 and delta N-15 ratios, and N-area, whereas the offspring ordination was less structured. Parent trait-trait correlations were in line with expectations from the leaf economic spectrum. We show considerable trait plasticity in the woody shrub over microgeographic scales (<100 km), indicating it has the adaptive potential within a generation to functionally acclimate to a range of abiotic conditions. Since our study shrub is commonly used for restoration in southern Australia and local populations do not show strong genetic differentiation in functional traits, the potential risks of transferring seed across the broad environmental conditions are not likely to be a significant issue.
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| 4. |
- Cornille, Amandine, et al.
(författare)
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The relative role of plasticity and demographic history in Capsella bursa-pastoris : a common garden experiment in Asia and Europe
- 2022
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; 14:3
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Tidskriftsartikel (refereegranskat)abstract
- The respective role of demography, plasticity and adaptation in the colonization success of plant species remains an intense topic of investigation in evolutionary ecology and genomics. A screening of phenotypic traits of hundreds of genotypes in large-scale common garden experiments in Eastern Asia and Europe shows that both demography and a high phenotypic plasticity underlie the success of the tetraploid and self-fertilizing species, Capsella bursa-pastoris, the shepherd's purse, at different stages of expansion. This study provides insight into the causes of the ecological success of a plant species during range expansion. The colonization success of a species depends on the interplay between its phenotypic plasticity, adaptive potential and demographic history. Assessing their relative contributions during the different phases of a species range expansion is challenging, and requires large-scale experiments. Here, we investigated the relative contributions of plasticity, performance and demographic history to the worldwide expansion of the shepherd's purse, Capsella bursa-pastoris. We installed two large common gardens of the shepherd's purse, a young, self-fertilizing, allopolyploid weed with a worldwide distribution. One common garden was located in Europe, the other in Asia. We used accessions from three distinct genetic clusters (Middle East, Europe and Asia) that reflect the demographic history of the species. Several life-history traits were measured. To explain the phenotypic variation between and within genetic clusters, we analysed the effects of (i) the genetic clusters, (ii) the phenotypic plasticity and its association to fitness and (iii) the distance in terms of bioclimatic variables between the sampling site of an accession and the common garden, i.e. the environmental distance. Our experiment showed that (i) the performance of C. bursa-pastoris is closely related to its high phenotypic plasticity; (ii) within a common garden, genetic cluster was a main determinant of phenotypic differences; and (iii) at the scale of the experiment, the effect of environmental distance to the common garden could not be distinguished from that of genetic clusters. Phenotypic plasticity and demographic history both play important role at different stages of range expansion. The success of the worldwide expansion of C. bursa-pastoris was undoubtedly influenced by its strong phenotypic plasticity.
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| 5. |
- García, Yedra, et al.
(författare)
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Water deficit changes patterns of selection on floral signals and nectar rewards in the common morning glory
- 2023
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Ingår i: AoB Plants. - 2041-2851. ; 15:5
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Tidskriftsartikel (refereegranskat)abstract
- Understanding whether and how resource limitation alters phenotypic selection on floral traits is key to predict the evolution of plant-pollinator interactions under climate change. Two important resources predicted to decline with our changing climate are pollinators and water in the form of increased droughts. Most work, however, has studied these selective agents separately and in the case of water deficit, studies are rare. Here, we use the common morning glory (Ipomoea purpurea) to investigate the effects of experimental reduction in pollinator access and water availability on floral signals and nectar rewards and their effects on phenotypic selection on these traits. We conducted a manipulative experiment in a common garden, where we grew plants in three treatments: (1) pollinator restriction, (2) water reduction and (3) unmanipulated control. Plants in pollinator restriction and control treatments were well-watered compared to water deficit. We found that in contrast to pollinator restriction, water deficit had strong effects altering floral signals and nectar rewards but also differed in the direction and strength of selection on these traits compared to control plants. Water deficit increased the opportunity for selection, and selection in this treatment favoured lower nectar volumes and larger floral sizes, which might further alter pollinator visitation. In addition, well-watered plants, both in control and pollinator deficit, showed similar patterns of selection to increase nectar volume suggesting non-pollinator-mediated selection on nectar. Our study shows that floral traits may evolve in response to reduction in water access faster than to declines in pollinators and reinforces that abiotic factors can be important agents of selection for floral traits. Although only few experimental selection studies have manipulated access to biotic and abiotic resources, our results suggest that this approach is key for understanding how pollination systems may evolve under climate change.
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| 6. |
- Kessous, I. M., et al.
(författare)
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Pollinators drive floral evolution in an Atlantic Forest genus
- 2020
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Ingår i: Aob Plants. - : Oxford University Press (OUP). - 2041-2851. ; 12:5
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Tidskriftsartikel (refereegranskat)abstract
- Pollinators are important drivers of angiosperm diversification at both micro- and macroevolutionary scales. Both hummingbirds and bats pollinate the species-rich and morphologically diverse genus Vriesea across its distribution in the Brazilian Atlantic Forest. Here, we (i) determine if floral traits predict functional groups of pollinators as documented, confirming the pollination syndromes in Vriesea and (ii) test if genetic structure in Vriesea is driven by geography (latitudinal and altitudinal heterogeneity) or ecology (pollination syndromes). We analysed 11 floral traits of 58 Vriesea species and performed a literature survey of Vriesea pollination biology. The genealogy of haplotypes was inferred and phylogenetic analyses were performed using chloroplast (rps16-trnk and matK) and nuclear (PHYC) molecular markers. Floral traits accurately predict functional groups of pollinators in Vriesea. Genetic groupings match the different pollination syndromes. Species with intermediate position were found between the groups, which share haplotypes and differ morphologically from the typical hummingbird- and bat-pollinated flowers of Vriesea. The phylogeny revealed moderately to well-supported clades which may be interpreted as species complexes. Our results suggest a role of pollinators driving ecological isolation in Vriesea clades. Incipient speciation and incomplete lineage sorting may explain the overall low genetic divergence within and among morphologically defined species, precluding the identification of clear species boundaries. The intermediate species with mixed floral types likely represent a window into shifts between pollinator syndromes. This study reports the morphological-genetic continuum that may be typical of ongoing pollinator-driven speciation in biodiversity hotspots.
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| 7. |
- Lankinen, Åsa, et al.
(författare)
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Differential selection on pollen and pistil traits in relation to pollen competition in the context of a sexual conflict over timing of stigma receptivity
- 2016
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; 8
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Tidskriftsartikel (refereegranskat)abstract
- Sexual conflict and its evolutionary consequences are understudied in plants, but the theory of sexual conflict may help explain how selection generates and maintains variability. Here, we investigated selection on pollen and pistil traits when pollen arrives sequentially to partially receptive pistils in relation to pollen competition and a sexual conflict over timing of stigma receptivity in the mixed-mating annual Collinsia heterophylla (Plantaginaceae). In this species the conflict is generated by early fertilizing pollen that reduces seed production, which is counteracted by delaying receptivity in the recipient. We performed sequential two-donor pollinations at early floral developmental stages involving two pollen deposition schedules (with or without a time lag of 1 day), using only outcross or self and outcross pollen. We investigated pollen and pistil traits in relation to siring success (male fitness) and seed production (female fitness). In contrast to previous findings in receptive pistils in C. heterophylla and in other species, last arriving pollen donors showed highest siring success in partially receptive pistils. The last male advantage was weaker when self pollen was the first arriving donor. Two measures of germination rate (early and late) and pollen tube growth rate of first arriving donors were important for siring success in crosses with a time lag, while only late germination rate had an effect in contemporary crosses. Curiously, late stigma receptivity was negatively related to seed production in our contemporary crosses, which was opposite to expectation. Our results in combination with previous studies suggest that pollen and pistil traits in C. heterophylla are differentially advantageous depending on stage of floral development and varying pollen deposition schedules. Variation in success of these traits over floral development time may result from sexually antagonistic selection.
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| 8. |
- Lankinen, Åsa, et al.
(författare)
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Using theories of sexual selection and sexual conflict to improve our understanding of plant ecology and evolution
- 2015
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Ingår i: AoB PLANTS. - : Oxford University Press (OUP). - 2041-2851. ; 7
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Forskningsöversikt (refereegranskat)abstract
- Today it is accepted that the theories of sexual selection and sexual conflict are general and can be applied to both animals and plants. However, potentially due to a controversial history, plant studies investigating sexual selection and sexual conflict are relatively rare. Moreover, these theories and concepts are seldom implemented in research fields investigating related aspects of plant ecology and evolution. Even though these theories are complex, and can be difficult to study, we suggest that several fields in plant biology would benefit from incorporating and testing the impact of selection pressures generated by sexual selection and sexual conflict. Here we give examples of three fields where we believe such incorporation would be particularly fruitful, including (i) mechanisms of pollen-pistil interactions, (ii) mating-system evolution in hermaphrodites and (iii) plant immune responses to pests and pathogens.
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| 9. |
- Lehrman, Anna, et al.
(författare)
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Constitutive and herbivore-induced systemic volatiles differentially attract an omnivorous biocontrol agent to contrasting Salix clones
- 2013
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Ingår i: AoB PLANTS. - : Oxford University Press (OUP). - 2041-2851. ; 5
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Tidskriftsartikel (refereegranskat)abstract
- While carnivores are known to be attracted to herbivore-induced plant volatiles, little is known about how such volatiles may affect the behaviour of omnivorous predators that may use both plants and herbivores as food. Here, we examine how systemically produced plant volatiles, in response to local herbivore damage, differentially attract a key omnivorous predator, Anthocoris nemorum (Heteroptera: Anthocoridae), to single clones of three species of Salix: S. viminalis, S. dasyclados and S. cinerea. The profiles of the plant volatiles produced were found to vary among Salix clones and between herbivore-damaged and intact plants. Anthocoris nemorum was attracted to the volatiles released from undamaged plants of all three species, but most strongly to a native S. cinerea clone. Plants damaged by the herbivorous leaf beetle Phratora vulgatissima (Coleoptera: Chrysomelidae) were generally more attractive than undamaged plants, with A. nemorum responding to systemic changes in the damaged plants where the experimental design specifically excluded volatiles released from the actual site of damage. When comparing damaged plants, the S. dasyclados clone was more attractive to A. nemorum than the S. viminalis clone-a somewhat surprising result since this Salix clone is considered relatively resistant to P. vulgatissima, and hence offers a limited amount of prey. Our experiments highlight that both constitutive and induced plant volatiles play a role in omnivore attraction, and this emphasizes the importance of considering odours of released volatiles when cropping and breeding Salix for increased resistance to herbivores.
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| 10. |
- Lembrechts, Jonas J., et al.
(författare)
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Trade-off between competition and facilitation defines gap colonization in mountains
- 2015
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; 7
-
Tidskriftsartikel (refereegranskat)abstract
- Recent experimental observations show that gap colonization in small-stature (e.g. grassland and dwarf shrubs) vegetation strongly depends on the abiotic conditions within them. At the same time, within-gap variation in biotic interactions such as competition and facilitation, caused by distance to the gap edge, would affect colonizer performance, but a theoretical framework to explore such patterns is missing. Here, we model how competition, facilitation and environmental conditions together determine the small-scale patterns of gap colonization along a cold gradient in mountains, by simulating colonizer survival in gaps of various sizes. Our model adds another dimension to the known effects of biotic interactions along a stress gradient by focussing on the trade-off between competition and facilitation in the within-gap environment. We show that this trade-off defines a peak in colonizer survival at a specific distance from the gap edge, which progressively shifts closer to the edge as the environment gets colder, ultimately leaving a large fraction of gaps unsuitable for colonization in facilitation-dominated systems. This is reinforced when vegetation size and temperature amelioration are manipulated simultaneously with temperature in order to simulate an elevational gradient more realistically. Interestingly, all other conditions being equal, the magnitude of the realized survival peak was always lower in large than in small gaps, making large gaps harder to colonize. The model is relevant to predict effects of non-native plant invasions and climate warming on colonization processes in mountains.
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| 11. |
- Maciel-Silva, Adaíses S., et al.
(författare)
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Altitude affects the reproductive performance in monoicous and dioicous bryophytes : examples from a Brazilian Atlantic rainforest
- 2012
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; , s. pls016-
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Tidskriftsartikel (refereegranskat)abstract
- Background and aims: Short life cycles and trade-offs linked to breeding systems make bryophytes good models for the study of plant reproductive strategies. Our aim was to test if differences in sexual reproductive performance of bryophytes in tropical rainforests are driven by the breeding system of the species (monoicous or dioicous) or are mainly affected by the habitat.Methodology: The reproductive performance (sexual branches, gametangia (sex organs), fertilization and sporophyte production) of 11 species was repeatedly monitored and analysed from populations at sea-level and montane sites of a Brazilian Atlantic rainforest over 15 months.Principal results: Monoicous species had the highest reproductive performance, particularly for sexual branches, fertilized gametangia and sporophyte production. Species at the sea-level site produced more sexual branches and had more female-biased sex ratios of gametangia than species in the montane site. Fertilizations were more frequent at the montane site, but sporophyte frequency was similar between the two sites. Fertilization tended to occur mostly in the periods of heavy rain (October to December).Conclusions: Breeding system is not the only major influence on the reproductive performance of bryophytes. We show that habitat is also an important factor determining life-history differentiation. Female-biased sex ratios and low rates of fertilization are seen to be compensated for by high production of reproductive structures at the initial phases of the reproductive cycle.
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| 12. |
- Marttila, Salla
(författare)
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Indigenous Australian grass seeds as grains: macrostructure, microstructure and histochemistry
- 2023
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Ingår i: AoB PLANTS. - 2041-2851. ; 15
-
Tidskriftsartikel (refereegranskat)abstract
- Utilization of grains of local grasses by Australia's First Nations people for food and connection to Country has largely been lost due to colonization. Native Australian grain production has the potential to deliver environmental, economic, nutritional and cultural benefits to First Nations people and the wider community. Revitalization of the native grain food system can only be achieved if relevant properties of the grains are elucidated. This study aimed to characterize the grain structure and histochemistry of four Australian native grasses: Dactyloctenium radulans (Button Grass), Astrebla lappacea (Curly Mitchell Grass), Panicum decompositum (Native Millet) and Microlaena stipoides (Weeping Grass). For these species, as well as wheat and sorghum, whole-grain images were obtained via stereo microscopy, starch and the embryo were visualized, and sections of fixed grains were imaged via bright-field and fluorescence microscopy. The shape, size and colour of the whole native grains varied between the species. The aleurone layer was one-cell thick in the native species, as in the domesticated grains, except for Weeping Grass, which had a two-cell-thick aleurone. In the native grains, endosperm cell walls appeared thinner than in wheat and sorghum. Starch granules in Button Grass, Curly Mitchell Grass and Native Millet were found mainly in the central region of the starchy endosperm, with very few granules in the sub-aleurone layer, whereas Weeping Grass had abundant starch in the sub-aleurone. Protein appeared most abundant in the aleurone and sub-aleurone layers of the native grains, although in Button Grass, the starchy endosperm was observed to be rich in protein, as in wheat and sorghum. As a proportion of the whole grain, the embryo was larger in the native species than in wheat. The differences found in the grain properties among the four native Australian species have important implications for the agri-food industry in a changing climate.Revitalization of native grain food systems in Australia requires knowledge of the structure and composition of grain components so that the grains can be utilized effectively in commercial food processing. We studied the grain morphology of four native Australian grass species that have been used as foods by Aboriginal communities for millenia: Button Grass (Dactyloctenium radulans ), Curly Mitchell Grass (Astrebla lappacea ), Native Millet (Panicum decompositum ) and Weeping Grass (Microlaena stipoides ). We characterized important macrostructural, microstructural and histochemical properties of the grains using stereo, bright-field and fluorescence microscopy. We found differences in the size, shape and colour of the whole grains, aleurone structure, spatial distribution of starch, beta-glucan/cellulose, protein and relative size and location of the embryo among the four native Australian species. Our results should stimulate further research into the connections between the structural, processing and nutritional properties of these grains.
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| 13. |
- Milberg, Per, et al.
(författare)
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Temporal variations in methane emissions from emergent aquatic macrophytes in two boreonemoral lakes
- 2017
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Ingår i: AoB Plants. - : OXFORD UNIV PRESS. - 2041-2851. ; 9
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Tidskriftsartikel (refereegranskat)abstract
- Methane (CH4) emissions via emergent aquatic macrophytes can contribute substantially to the global CH4 balance. We addressed temporal variability in CH4 flux by using the static chamber approach to quantify fluxes from plots dominated by two species considered to differ in flux transport mechanisms (Phragmites australis, Carex rostrata). Temporal variability in daily mean emissions from early June to early October was substantial. The variable that best explained this variation was air temperature. Regular and consistent diel changes were absent and therefore less relevant to include when estimating or modelling CH4 emissions. Methane emissions per m(2) from nearby plots were similar for Phragmites australis and Carex rostrata indicating that CH4 production in the system influenced emissions more than the species identity. This study indicates that previously observed diel patterns and specieseffects on emissions require further evaluation to support improved local and regional CH4 flux assessments.
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| 14. |
- Mujtaba, Tahir
(författare)
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Exploration of cotton leaf curl virus resistance genes and their screening in Gossypium arboreum by targeting resistance gene analogues
- 2018
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Ingår i: AoB PLANTS. - : Oxford University Press (OUP). - 2041-2851. ; 10
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Tidskriftsartikel (refereegranskat)abstract
- Cotton leaf curl virus (CLCuV) disease is one of the major limiting factors in cotton production, particularly in widely cultivated Gossypium hirsutum varieties that are susceptible to attack by this virus. Several approaches have been employed to explore putative resistance genes in another cotton species, G. arboreum. However, the exact mechanisms conferring disease resistance in cotton are still unknown. In the current study, we used various approaches to identify possible resistance genes against CLCuV infection. We report the identification and isolation of a set of genes involved in the resistance response to viral infestation. PCR products containing genomic DNA gave multiple amplifications with a single primer in most reactions, and 38 fragments were cloned from G. arboreum and G. hirsutum. The sequences of cloned fragments belonged to various pathway genes and uncharacterized proteins. However, five amplified fragments (RM1, RM6, RM8, RM12 and RM31) showed similarity with R genes. Maximum homology (94 %) was observed with G. raimondii toll/interleukin receptor-like protein. BLAST search showed the homology of all resistance gene analogues (RGAs) with more than one chromosome, and multiple hits were observed on each chromosome for each RGA. Expression analysis through RT-PCR identified variable expression levels of the different RGAs in all tested genotypes. The expression level of RGAs differed between symptomatic and asymptomatic plants, with the exception of RGA 395, whose expression level was the same in both diseased and healthy plants. Knowledge of the interaction of these genes with various cotton pathogens could be utilized to improve the resistance of susceptible G. hirsutum and other plant species.
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| 15. |
- Olsson, Ola, et al.
(författare)
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Competition, seed dispersal and hunting : What drives germination and seedling survival in an Afrotropical forest?
- 2019
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; 11:2
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Tidskriftsartikel (refereegranskat)abstract
- Disentangling the contributions of different processes that influence plant recruitment, such as competition and seed dispersal, is important given the increased human-mediated changes in tropical forest ecosystems. Previous studies have shown that seedling communities in an Afrotropical rainforest in southeastern Nigeria are strongly affected by the loss of important seed-dispersing primates, including Cross River gorillas (Gorilla gorilla diehli), chimpanzee (Pan troglodytes elioti) and drill (Mandrillus leucophaeus). Here we study how germination and survival of tree seedlings are affected by competition and reduced seed dispersal in three contiguous forest reserves, in southeastern Nigeria, with similar mature tree species composition and structure. We use an experimental design aimed at manipulating the effect of competition among seedlings in three protected and three hunted sites within the reserves. We use a total of sixty 5 × 5 m plots of three types: plots cleared of all seedlings, plots selectively cleared of all primate-dispersed seedlings and control plots. All seedlings were identified, measured, assigned to dispersal mode and tagged, and after 1 year we evaluated survival, mortality and new recruits. We found that in hunted sites germination of abiotically dispersed species was over four times higher in cleared plots compared to control plots, whereas germination of primate-dispersed species was the same, which indicated that dispersal limitation was the dominant force in seedling recruitment in hunted sites. This was supported by the fact that the germination of all dispersal modes in the selectively cleared plots in protected sites was similar to the control plots in the same sites, but germination of abiotically dispersed species was significantly lower than in cleared plots in hunted sites. Competition among seedlings was mostly evident from the fact that 75 % more seedlings of primate-dispersed species germinated in cleared compared to control plots in protected sites. We conclude that inter-seedling competition may be irrelevant to seedling recruitment in hunted sites, where dispersal limitation appears to be a much stronger force shaping the seedling plant community, and thus hunting indirectly reverses the importance of competition and dispersal limitation in structuring seedling communities.
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| 16. |
- Quatela, Anne-Sophie, et al.
(författare)
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Retrieval of long DNA reads from herbarium specimens
- 2023
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Ingår i: AOB PLANTS. - 2041-2851. ; 15:6
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Tidskriftsartikel (refereegranskat)abstract
- High-throughput sequencing of herbarium specimens' DNA with short-read platforms has helped explore many biological questions. Here, for the first time, we investigate the potential of using herbarium specimens as a resource for long-read DNA sequencing technologies. We use target capture of 48 low-copy nuclear loci in 12 herbarium specimens of Silene as a basis for long-read sequencing using SMRT PacBio Sequel. The samples were collected between 1932 and 2019. A simple optimization of size selection protocol enabled the retrieval of both long DNA fragments (>1 kb) and long on-target reads for nine of them. The limited sampling size does not enable statistical evaluation of the influence of specimen age to the DNA fragmentation, but our results confirm that younger samples, that is, collected after 1990, are less fragmented and have better sequencing success than specimens collected before this date. Specimens collected between 1990 and 2019 yield between 167 and 3403 on-target reads>1 kb. They enabled recovering between 34 loci and 48 (i.e. all loci recovered). Three samples from specimens collected before 1990 did not yield on-target reads>1 kb. The four other samples collected before this date yielded up to 144 reads and recovered up to 25 loci. Young herbarium specimens seem promising for long-read sequencing. However, older ones have partly failed. Further exploration would be necessary to statistically test and understand the potential of older material in the quest for long reads. We would encourage greatly expanding the sampling size and comparing different taxonomic groups.
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| 17. |
- Stuart, David, et al.
(författare)
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Aerobic barley mg-protoporphyrin ix monomethyl ester cyclase is powered by electrons from ferredoxin
- 2020
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Ingår i: Plants. - : MDPI AG. - 2041-2851 .- 2223-7747. ; 9:9
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Tidskriftsartikel (refereegranskat)abstract
- Chlorophyll is the light-harvesting molecule central to the process of photosynthesis. Chlorophyll is synthesized through 15 enzymatic steps. Most of the reactions have been characterized using recombinant proteins. One exception is the formation of the isocyclic E-ring characteristic of chlorophylls. This reaction is catalyzed by the Mg-protoporphyrin IX monomethyl ester cyclase encoded by Xantha-l in barley (Hordeum vulgare L.). The Xantha-l gene product (XanL) is a membrane-bound diiron monooxygenase, which requires additional soluble and membrane-bound components for its activity. XanL has so far been impossible to produce as an active recombinant protein for in vitro assays, which is required for deeper biochemical and structural analyses. In the present work, we performed cyclase assays with soluble and membrane-bound fractions of barley etioplasts. Addition of antibodies raised against ferredoxin or ferredoxin-NADPH oxidoreductase (FNR) inhibited assays, strongly suggesting that reducing electrons for the cyclase reaction involves ferredoxin and FNR. We further developed a completely recombinant cyclase assay. Expression of active XanL required co-expression with an additional protein, Ycf54. In vitro cyclase activity was obtained with recombinant XanL in combination with ferredoxin and FNR. Our experiment demonstrates that the cyclase is a ferredoxin-dependent enzyme. Ferredoxin is part of the photosynthetic electron-transport chain, which suggests that the cyclase reaction might be connected to photosynthesis under light conditions.
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| 18. |
- Vega-Polanco, Mayumi, et al.
(författare)
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Intraspecific variation of scent and its impact on pollinators' preferences
- 2023
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Ingår i: AoB Plants. - : Oxford University Press (OUP). - 2041-2851. ; 15:4
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Tidskriftsartikel (refereegranskat)abstract
- Floral scents shape plant-pollinator interactions. Although populations of the same species can vary in their floral scent, little is known about how this variation affects pollinator visitation. In this study, we compare the scents emitted by buzz-pollinated Solanum rostratum (Solanaceae) in two areas of its distribution (Mexico and USA) and investigate how these differences in scent affect pollinator preferences and attraction. We determined the variation of floral volatile compounds using hexane extraction followed by gas chromatography coupled with spectrometry. We also performed a field cage multiple-choice bioassay and a Y-tube behavioural bioassay using Bombus impatiens. We recorded 13 volatile compounds in floral extracts for plants from both ranges that varied qualitative and semi-quantitatively among populations. We found that in the field cage experiment, bumble bees visited plants from the US populations more frequently than plants from Mexican populations. However, bees showed no difference in preference between extracts from Mexican or US flowers. We conclude that although bees show differential visitation to whole plants of different regions, variation in floral extract alone does not translate into differences in preference by B. impatiens. The potential effects of variation in floral scent on the other native bee pollinators remain to be assessed. Floral scents are key in plant-pollinator interactions. These scents can vary even among populations of the same species, which influences pollinator attraction. In this study, we determined the variation in floral scents in a buzz-pollinated Solanum rostratum in two areas of its distribution (Mexico and the USA). Moreover, we investigated how these differences affect pollinator preferences and attraction of Bombus impatiens. Our main finding is that floral scents emitted by S. rostratum plants from the Mexican range differ from the USA distribution range; although we found similar preferences of bumble bees for floral extracts, bumble bees preferred to visit plants from the US populations in a field cage bioassay. These contradictory results can probably be attributed to other signals not evaluated in this study or the extraction method of floral extracts. Future studies are necessary to evaluate the potential effects of variation in floral scent on other native bee pollinators.
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| 19. |
- Walck, Jeffery L., et al.
(författare)
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Seed germination and seedling development ecology in world-wide populations of a circumboreal Tertiary relict
- 2012
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Ingår i: AoB Plants. - : Oxford University Press. - 2041-2851. ; , s. pls007-
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Tidskriftsartikel (refereegranskat)abstract
- Background and aims Temperate forests are disjunct in the Northern Hemisphere, having become fragmented from the earlier widespread (Tertiary) boreotropical forest. We asked ‘What are the contemporary patterns of population variation in ecological traits of a Tertiary relict in a macroecological context?’. This issue underpins our understanding of variation in populations occurring in the same biome but on different continents.Methodology We examined characters associated with root and shoot emergences among populations of Viburnum opulus in temperate forests of Asia, North America and Europe. This species has complex seedling emergence extending over several years and requiring various temperature cues.Principal results Populations varied in germination responses and clustered into groups that were only partly related to varietal status. Whereas roots (at warm temperatures) and shoots (following a cold period) simultaneously emerged from seeds of all populations when simulated dispersal occurred in winter, they were delayed in some populations when dispersal occurred in summer.Conclusions Viburnum opulus populations, some separated by 10 300 km, showed high similarity in seedling development and in germination phenology, and we suggest that stabilizing selection has played a key role in maintaining similar dormancy mechanisms. Nevertheless, there was some degree of variation in other germination characters, suggesting local adaptation.
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| 20. |
- Warren, Jeffrey M., et al.
(författare)
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Carbon dioxide stimulation of photosynthesis in Liquidambar styraciflua is not sustained during a 12-year field experiment
- 2015
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Ingår i: AoB Plants. - : Oxford University Press. - 2041-2851. ; 7
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Tidskriftsartikel (refereegranskat)abstract
- Elevated atmospheric CO2 (eCO2) often increases photosynthetic CO2assimilation (A) in field studies of temperate tree species. However, there is evidence that A may decline through time due to biochemical and morphological acclimation, and environmental constraints. Indeed, at the free-air CO2 enrichment (FACE) study in Oak Ridge, Tennessee, A was increased in 12-year-old sweetgum trees following 2 years of ∼40 % enhancement of CO2. A was re-assessed a decade later to determine if the initial enhancement of photosynthesis by eCO2 was sustained through time. Measurements were conducted at prevailing CO2 and temperature on detached, re-hydrated branches using a portable gas exchange system. Photosynthetic CO2 response curves (A versus the CO2 concentration in the intercellular air space (Ci); or A–Ci curves) were contrasted with earlier measurements using leaf photosynthesis model equations. Relationships between light-saturated photosynthesis (Asat), maximum electron transport rate (Jmax), maximum Rubisco activity (Vcmax), chlorophyll content and foliar nitrogen (N) were assessed. In 1999, Asat for eCO2treatments was 15.4 ± 0.8 μmol m−2 s−1, 22 % higher than aCO2treatments (P < 0.01). By 2009, Asat declined to <50 % of 1999 values, and there was no longer a significant effect of eCO2 (Asat = 6.9 or 5.7 ± 0.7 μmol m−2 s−1 for eCO2 or aCO2, respectively). In 1999, there was no treatment effect on area-based foliar N; however, by 2008, N content in eCO2 foliage was 17 % less than that in aCO2 foliage. Photosynthetic N-use efficiency (Asat : N) was greater in eCO2 in 1999 resulting in greaterAsat despite similar N content, but the enhanced efficiency in eCO2 trees was lost as foliar N declined to sub-optimal levels. There was no treatment difference in the declining linear relationships between Jmax or Vcmax with declining N, or in the ratio of Jmax : Vcmax through time. Results suggest that the initial enhancement of photosynthesis to elevated CO2 will not be sustained through time if N becomes limited.
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