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Sökning: WFRF:(Čapek J.)

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1.
  • Capek, P. T., et al. (författare)
  • A plant-microbe interaction framework explaining nutrient effects on primary production
  • 2018
  • Ingår i: Nature Ecology & Evolution. - : Springer Science and Business Media LLC. - 2397-334X. ; 2:10, s. 1588-1596
  • Tidskriftsartikel (refereegranskat)abstract
    • In most terrestrial ecosystems, plant growth is limited by nitrogen and phosphorus. Adding either nutrient to soil usually affects primary production, but their effects can be positive or negative. Here we provide a general stoichiometric framework for interpreting these contrasting effects. First, we identify nitrogen and phosphorus limitations on plants and soil microorganisms using their respective nitrogen to phosphorus critical ratios. Second, we use these ratios to show how soil microorganisms mediate the response of primary production to limiting and non-limiting nutrient addition along a wide gradient of soil nutrient availability. Using a meta-analysis of 51 factorial nitrogen-phosphorus fertilization experiments conducted across multiple ecosystems, we demonstrate that the response of primary production to nitrogen and phosphorus additions is accurately predicted by our stoichiometric framework. The only pattern that could not be predicted by our original framework suggests that nitrogen has not only a structural function in growing organisms, but also a key role in promoting plant and microbial nutrient acquisition. We conclude that this stoichiometric framework offers the most parsimonious way to interpret contrasting and, until now, unresolved responses of primary production to nutrient addition in terrestrial ecosystems.
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2.
  • Capek, P., et al. (författare)
  • The effect of warming on the vulnerability of subducted organic carbon in arctic soils
  • 2015
  • Ingår i: Soil Biology & Biochemistry. - : Elsevier BV. - 0038-0717 .- 1879-3428. ; 90, s. 19-29
  • Tidskriftsartikel (refereegranskat)abstract
    • Arctic permafrost soils contain large stocks of organic carbon (OC). Extensive cryogenic processes in these soils cause subduction of a significant part of OC-rich topsoil down into mineral soil through the process of cryoturbation. Currently, one-fourth of total permafrost OC is stored in subducted organic horizons. Predicted climate change is believed to reduce the amount of OC in permafrost soils as rising temperatures will increase decomposition of OC by soil microorganisms. To estimate the sensitivity of OC decomposition to soil temperature and oxygen levels we performed a 4-month incubation experiment in which we manipulated temperature (4-20 degrees C) and oxygen level of topsoil organic, subducted organic and mineral soil horizons. Carbon loss (C-LOSS) was monitored and its potential biotic and abiotic drivers, including concentrations of available nutrients, microbial activity, biomass and stoichiometry, and extracellular oxidative and hydrolytic enzyme pools, were measured. We found that independently of the incubation temperature, C-LOSS from subducted organic and mineral soil horizons was one to two orders of magnitude lower than in the organic topsoil horizon, both under aerobic and anaerobic conditions. This corresponds to the microbial biomass being lower by one to two orders of magnitude. We argue that enzymatic degradation of autochthonous subducted OC does not provide sufficient amounts of carbon and nutrients to sustain greater microbial biomass. The resident microbial biomass relies on allochthonous fluxes of nutrients, enzymes and carbon from the OC-rich topsoil. This results in a "negative priming effect", which protects autochthonous subducted OC from decomposition at present. The vulnerability of subducted organic carbon in cryoturbated arctic soils under future climate conditions will largely depend on the amount of allochthonous carbon and nutrient fluxes from the topsoil. (C) 2015 Elsevier Ltd. All rights reserved.
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3.
  • Wild, Birgit, et al. (författare)
  • Amino acid production exceeds plant nitrogen demand in Siberian tundra
  • 2018
  • Ingår i: Environmental Research Letters. - : IOP Publishing. - 1748-9326. ; 13:3
  • Tidskriftsartikel (refereegranskat)abstract
    • Arctic plant productivity is often limited by low soil N availability. This has been attributed to slow breakdown of N-containing polymers in litter and soil organic matter (SOM) into smaller, available units, and to shallow plant rooting constrained by permafrost and high soil moisture. Using N-15 pool dilution assays, we here quantified gross amino acid and ammonium production rates in 97 active layer samples from four sites across the Siberian Arctic. We found that amino acid production in organic layers alone exceeded literature-based estimates of maximum plant N uptake 17-fold and therefore reject the hypothesis that arctic plant N limitation results from slow SOM breakdown. High microbial N use efficiency in organic layers rather suggests strong competition of microorganisms and plants in the dominant rooting zone. Deeper horizons showed lower amino acid production rates per volume, but also lower microbial N use efficiency. Permafrost thaw together with soil drainage might facilitate deeper plant rooting and uptake of previously inaccessible subsoil N, and thereby promote plant productivity in arctic ecosystems. We conclude that changes in microbial decomposer activity, microbial N utilization and plant root density with soil depth interactively control N availability for plants in the Arctic.
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4.
  • Gentsch, N., et al. (författare)
  • Storage and transformation of organic matter fractions in cryoturbated permafrost soils across the Siberian Arctic
  • 2015
  • Ingår i: Biogeosciences. - : Copernicus GmbH. - 1726-4170 .- 1726-4189. ; 12:14, s. 4525-4542
  • Tidskriftsartikel (refereegranskat)abstract
    • In permafrost soils, the temperature regime and the resulting cryogenic processes are important determinants of the storage of organic carbon (OC) and its small-scale spatial variability. For cryoturbated soils, there is a lack of research assessing pedon-scale heterogeneity in OC stocks and the transformation of functionally different organic matter (OM) fractions, such as particulate and mineral-associated OM. Therefore, pedons of 28 Turbels were sampled in 5m wide soil trenches across the Siberian Arctic to calculate OC and total nitrogen (TN) stocks based on digital profile mapping. Density fractionation of soil samples was performed to distinguish between particulate OM (light fraction, LF, < 1.6 g cm(-3)), mineral associated OM (heavy fraction, HF, > 1.6 g cm(-3)), and a mobilizable dissolved pool (mobilizable fraction, MoF). Across all investigated soil profiles, the total OC storage was 20.2 +/- 8.0 kgm(-2) (mean +/- SD) to 100 cm soil depth. Fifty-four percent of this OC was located in the horizons of the active layer (annual summer thawing layer), showing evidence of cryoturbation, and another 35% was present in the upper permafrost. The HF-OC dominated the overall OC stocks (55 %), followed by LF-OC (19% in mineral and 13% in organic horizons). During fractionation, approximately 13% of the OC was released as MoF, which likely represents a readily bioavailable OM pool. Cryogenic activity in combination with cold and wet conditions was the principle mechanism through which large OC stocks were sequestered in the subsoil (16.4 +/- 8.1 kgm(-2); all mineral B, C, and permafrost horizons). Approximately 22% of the subsoil OC stock can be attributed to LF material subducted by cryoturbation, whereas migration of soluble OM along freezing gradients appeared to be the principle source of the dominant HF (63 %) in the subsoil. Despite the unfavourable abiotic conditions, low C/N ratios and high delta C-13 values indicated substantial microbial OM transformation in the subsoil, but this was not reflected in altered LF and HF pool sizes. Partial least-squares regression analyses suggest that OC accumulates in the HF fraction due to co-precipitation with multivalent cations (Al, Fe) and association with poorly crystalline iron oxides and clay minerals. Our data show that, across all permafrost pedons, the mineral-associated OM represents the dominant OM fraction, suggesting that the HF-OC is the OM pool in permafrost soils on which changing soil conditions will have the largest impact.
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5.
  • Melo, Nadia, et al. (författare)
  • The irritant receptor TRPA1 mediates the mosquito repellent effect of catnip
  • 2021
  • Ingår i: Current Biology. - : Elsevier BV. - 0960-9822. ; 31:9, s. 5-1994
  • Tidskriftsartikel (refereegranskat)abstract
    • Catnip (Nepeta cataria) is a common garden herb well known for its euphoric and hallucinogenic effects on domestic cats,1–3 for its medicinal properties,4,5 as well as for its powerful repellent action on insects.6,7 Catnip extracts have been proposed as a natural alternative to synthetic insect repellents, such as N,N-diethyl-3-methylbenzamide (DEET),8,9 but how catnip triggers aversion in insects is not known. Here, we show that, both in Drosophila melanogaster flies and Aedes aegypti mosquitoes, the major mediator of catnip repellency is the widely conserved chemical irritant receptor TRPA1. In vitro, both catnip extract and its active ingredient nepetalactone can directly activate fly and mosquito TRPA1. In vivo, D. melanogaster and Ae. aegypti TRPA1 mutants are no longer repelled by catnip and nepetalactone. Interestingly, our data show that some, but not all, fly and mosquito TRPA1 variants are catnip targets. Moreover, unlike the broad TRPA1 agonist allyl isothiocyanate (AITC) (an active ingredient of tear gas and wasabi), catnip does not activate human TRPA1. Our results support the use of catnip and nepetalactone as insect-selective irritants and suggest that, despite TRPA1’s broad conservation, insect TRPA1 can be targeted for the development of safe repellents. Catnip has been used for millennia as an insect repellent. Melo et al. find that catnip and its major iridoid component nepetalactone activate insect isoforms of the irritant receptor TRPA1. Mosquitoes lacking TRPA1 are no longer repelled by catnip. Catnip does not activate human TRPA1, and this supports its use as a safe natural mosquito repellent.
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6.
  • Santruckova, Hana, et al. (författare)
  • Significance of dark CO2 fixation in arctic soils
  • 2018
  • Ingår i: Soil Biology and Biochemistry. - : Elsevier BV. - 0038-0717 .- 1879-3428. ; 119, s. 11-21
  • Tidskriftsartikel (refereegranskat)abstract
    • The occurrence of dark fixation of CO2 by heterotrophic microorganisms in soil is generally accepted, but its importance for microbial metabolism and soil organic carbon (C) sequestration is unknown, especially under C limiting conditions. To fill this knowledge gap, we measured dark (CO2)-C-13 incorporation into soil organic matter and conducted a C-13-labelling experiment to follow the C-13 incorporation into phospholipid fatty acids as microbial biomass markers across soil profiles of four tundra ecosystems in the northern circumpolar region, where net primary productivity and thus soil C inputs are low. We further determined the abundance of various carboxylase genes and identified their microbial origin with metagenomics. The microbial capacity for heterotrophic CO2 fixation was determined by measuring the abundance of carboxylase genes and the incorporation of C-13 into soil C following the augmentation of bioavailable C sources. We demonstrate that dark CO2 fixation occurred ubiquitously in arctic tundra soils, with increasing importance in deeper soil horizons, presumably due to increasing C limitation with soil depth. Dark CO2 fixation accounted on average for 0.4, 1.0, 1.1, and 16% of net respiration in the organic, cryoturbated organic, mineral and permafrost horizons, respectively. Genes encoding anaplerotic enzymes of heterotrophic microorganisms comprised the majority of identified carboxylase genes. The genetic potential for dark CO2 fixation was spread over a broad taxonomic range. The results suggest important regulatory function of CO2 fixation in C limited conditions. The measurements were corroborated by modeling the long-term impact of dark CO2 fixation on soil organic matter. Our results suggest that increasing relative CO2 fixation rates in deeper soil horizons play an important role for soil internal C cycling and can, at least in part, explain the isotopic enrichment with soil depth.
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7.
  • Arve, K, et al. (författare)
  • Analysis of the state and size of silver on alumina in effective removal of NOx from oxygen rich exhaust gas
  • 2006
  • Ingår i: Journal of Nanoscience and Nanotechnology. - : American Scientific Publishers. - 1533-4880 .- 0000-0000. ; 6:4, s. 1076-1083
  • Tidskriftsartikel (refereegranskat)abstract
    • Ag/alumina catalysts with different silver contents for octane-SCR were prepared by impregnation and incipient wetness methods. Activity tests revealed that the decisive factor for high activity is not only a high dispersion of silver, but also the ability of the system to redisperse clustered silver. Determination of dispersion by TEM/HAADF and O-2-chemisorption experiments resulted in values close to each other even if the results were not directly comparable. This is suggested to be due to not complete silver reduction below 700 degrees C and the samples being very heterogeneous in terms of particle size, e.g., having a bimodal size distribution. Small charged Ag-n(delta+) clusters containing 2-8 silver atoms highly prevailed in the samples containing < 2 wt% Ag and exhibiting high octane-SCR activity In highly loaded Ag/alumina samples or those reduced and reoxidized at high temperature (> 400 degrees C), large metallic particles are stabilized, resulting in poor conversion of NOx to N-2.
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8.
  • Čapek, J., et al. (författare)
  • Influence of laser powder bed fusion scanning pattern on residual stress and microstructure of alloy 718
  • 2022
  • Ingår i: Materials & design. - : Elsevier Ltd. - 0264-1275 .- 1873-4197. ; 221
  • Tidskriftsartikel (refereegranskat)abstract
    • A comprehensive investigation is undertaken on the effect of laser scanning pattern on the microstructure of cylindrical samples made of Alloy 718 processed by Laser Powder Bed Fusion. It is observed that the common alternate direction scanning of the laser results in a more homogeneous microstructure than the less common concentric line scans where significant microstructural heterogeneities are seen between the edges and the center of the sample. The investigation focuses on the precipitation, crystallographic texture, grain size, grain morphology and residual stresses utilizing synchrotron X-ray diffraction, neutron diffraction and electron microscopy. The heterogeneous microstructure of the sample processed with the concentric laser pattern influences the chemical composition of the matrix, which alters the reference “strain free” interplanar spacing used for evaluating the residual strain. The investigation underlines the significance of the processing parameters on the homogeneity of the microstructure and the effect of the chemical variations on the determination of residual stresses in materials such as Alloy 718, where strong local chemical variations occur because of different types and extent of precipitation. © 2022
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9.
  • Čapek, J., et al. (författare)
  • The Effect of γ″ and δ Phase Precipitation on the Mechanical Properties of Inconel 718 Manufactured by Selective Laser Melting : An In Situ Neutron Diffraction and Acoustic Emission Study
  • 2021
  • Ingår i: JOM. - : Springer. - 1047-4838 .- 1543-1851. ; 73:1, s. 223-232
  • Tidskriftsartikel (refereegranskat)abstract
    • The deformation behavior of additively manufactured Alloy 718 in as-built condition and after annealing was studied in situ under tensile loading along the build direction. Pre-characterization by synchrotron X-ray diffraction and electron microscopy revealed a significant amount of γ″ precipitates in the as-built samples, whereas the γ″ phase was entirely consumed and needle-like δ precipitates appeared in the annealed sample. In situ neutron diffraction (ND) and acoustic emission (AE) enabled indirect observation of the role of the precipitates on the mechanical behavior. ND provided information on the load accommodation in the matrix, while AE detected a strong signal from the interaction of dislocations with the δ-phase precipitates during deformation of the annealed samples. The results imply that in the annealed samples the matrix sheds the load to the precipitates, while in the as-built material the matrix bares a significant load. © 2020, The Author(s).
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10.
  • Chen, Yikai, et al. (författare)
  • Benchmark problem definition and cross-validation for characteristic mode solvers
  • 2018
  • Ingår i: European Conference on Antennas and Propagation (EuCAP), 2018.. - : Institution of Engineering and Technology. - 9781785618161
  • Konferensbidrag (refereegranskat)abstract
    • In October 2016, the Special Interest Group on Theory of Characteristic Modes (TCM) initiated a coordinated effort to perform benchmarking work for characteristic mode (CM) analysis. The primary purpose is to help improve the reliability and capability of existing CM solvers and to provide the means for validating future tools. Significant progress has already been made in this joint activity. In particular, this paper describes several benchmark problems that were defined and analyzes some results from the cross-validations of different CM solvers using these problems. The results show that despite differences in the implementation details, good agreement is observed in the calculated eigenvalues and eigencurrents across the solvers. Finally, it is concluded that future work should focus on understanding the impact of common parameters and output settings to further reduce variability in the results.
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11.
  • Goel, Sneha, 1993-, et al. (författare)
  • Residual stress determination by neutron diffraction in powder bed fusion-built Alloy 718: Influence of process parameters and post-treatment
  • 2020
  • Ingår i: Materials and Design. - : Elsevier BV. - 1873-4197 .- 0264-1275. ; 195
  • Tidskriftsartikel (refereegranskat)abstract
    • Alloy 718 is a nickel-based superalloy that is widely used as a structural material for high-temperature applications. One concern that arises when Alloy 718 is manufactured using powder bed fusion (PBF) is that residual stresses appear due to the high thermal gradients. These residual stresses can be detrimental as they can degrade mechanical properties and distort components. In this work, residual stresses in PBF built Alloy 718, using both electron and laser energy sources, were measured by neutron diffraction. The effects of process parameters and thermal post-treatments were studied. The results show that thermal post-treatments effectively reduce the residual stresses present in the material. Moreover, the material built with laser based PBF showed a higher residual stress compared to the material built with electron-beam based PBF. The scanning strategy with the lower amount of residual stresses in case of laser based PBF was the chessboard strategy compared to the bi-directional raster strategy. In addition, the influence of measured and calculated lattice spacing (d0) on the evaluated residual stresses was investigated.
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12.
  • Wild, Birgit, et al. (författare)
  • Plant-derived compounds stimulate the decomposition of organic matter in arctic permafrost soils
  • 2016
  • Ingår i: Scientific Reports. - : Springer Science and Business Media LLC. - 2045-2322. ; 6
  • Tidskriftsartikel (refereegranskat)abstract
    • Arctic ecosystems are warming rapidly, which is expected to promote soil organic matter (SOM) decomposition. In addition to the direct warming effect, decomposition can also be indirectly stimulated via increased plant productivity and plant-soil C allocation, and this so called “priming effect” might significantly alter the ecosystem C balance. In this study, we provide first mechanistic insights into the susceptibility of SOM decomposition in arctic permafrost soils to priming. By comparing 119 soils from four locations across the Siberian Arctic that cover all horizons of active layer and upper permafrost, we found that an increased availability of plant-derived organic C particularly stimulated decomposition in subsoil horizons where most of the arctic soil carbon is located. Considering the 1,035 Pg of arctic soil carbon, such an additional stimulation of decomposition beyond the direct temperature effect can accelerate net ecosystem C losses, and amplify the positive feedback to global warming.
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