| 1. |
- Andreazza, N, et al.
(författare)
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Production of imidazole alkaloids in cell cultures of jaborandi as affected by the medium pH
- 2009
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Ingår i: Biotechnology letters. - : Springer. - 0141-5492 .- 1573-6776. ; 31:4, s. 607-614
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Tidskriftsartikel (refereegranskat)abstract
- The effect of pH (from 4.8 to 9.8) on the production of pilosine and pilocarpine and on their partition between cell and medium was studied in two lineages (P and PP) of Pilocarpus microphyllus cell suspension cultures. Highest mass accumulation was observed at high pHs and both lineages produced pilocarpine while only lineage PP produced pilosine. Both alkaloids were released in the medium but higher accumulation occurred in the cells. The highest production of pilocarpine was at pH 8.8-9.8 in both cell lineages. Other imidazole alkaloids were also identified in both lineages. At all pHs tested, the pH in the media cultures tended to stabilize around 6 after 10-15 days of cultivation. NO(3) (-) and NH(4) (+) variation in the media might partially explain the pH stabilization.
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| 2. |
- Bernhardsson, Carolina, et al.
(författare)
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Geographic structure in metabolome and herbivore community co-occurs with genetic structure in plant defence genes
- 2013
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Ingår i: Ecology Letters. - Hoboken : Wiley-Blackwell. - 1461-023X .- 1461-0248. ; 16:6, s. 791-798
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Tidskriftsartikel (refereegranskat)abstract
- Plantherbivore interactions vary across the landscape and have been hypothesised to promote local adaption in plants to the prevailing herbivore regime. Herbivores that feed on European aspen (Populus tremula) change across regional scales and selection on host defence genes may thus change at comparable scales. We have previously observed strong population differentiation in a set of inducible defence genes in Swedish P. tremula. Here, we study the geographic patterns of abundance and diversity of herbivorous insects, the untargeted metabolome of the foliage and genetic variation in a set of wound-induced genes and show that the geographic structure co-occurs in all three data sets. In response to this structure, we observe local maladaptation of herbivores, with fewer herbivores on local trees than on trees originated from more distant localities. Finally, we also identify 28 significant associations between single nucleotide polymorphisms SNPs from defence genes and a number of the herbivore traits and metabolic profiles.
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| 3. |
- Bernhardsson, Carolina, et al.
(författare)
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Population differentiation in arthropod community structure and phenotypic association with inducible defense genes in European Aspen (Populus tremula L., salicaceae)
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Annan publikation (övrigt vetenskapligt/konstnärligt)abstract
- Plant-herbivore interactions are known to vary across a landscape due to both variation in abiotic and biotic factors. Such spatial variation tends to promoting local adaption of plants to the prevailing herbivore regime. Here we use data from a common garden to look for patterns across populations in the abundance and diversity of herbivorous insects. We also screen for variation in the untargeted metabolome of the foliage of a subset of the same trees. We also search for phenotypic associations between genetic variation in a number of wound-induced genes and phenotypic variation in herbivore abundance, diversity and in metabolomes. We observe significant genetic variation in a number of herbivore-related traits but low correlations between traits. We do observe substantial genetic structure in both herbivore community structure and in metabolic profiles and this structure is aligned with genetic structure we have previously documented for a set of defense genes. We also identify a number of significant associations between SNPs from wound-induced defense genes and a number of the herbivore traits and metabolic profiles. However, these associations are likely not causal, but are rather caused by the underlying population structure we observe. These results highlight to the importance of historical processes and the need to better understand both the current-day geographic distribution of different herbivore species as well as the post-glacial colonization history of both plants and herbivores.
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| 4. |
- Crutsinger, G M, et al.
(författare)
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Ecosystem retrogression leads to increased insect abundance and herbivory across an island chronosequence
- 2008
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Ingår i: Functional Ecology. - : John Wiley & Sons. - 0269-8463 .- 1365-2435. ; 22:5, s. 816-823
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Tidskriftsartikel (refereegranskat)abstract
- 1. Ecosystem retrogression, the decline-phase of ecosystem development, occurs during the long-term absence of catastrophic disturbance. It usually involves increased nutrient limitation over time, and leads to reductions in primary productivity, decomposition, and nutrient cycling.2. As a consequence, retrogression can alter the quality and abundance of host plants as food resources, but little is known about how these changes influence herbivore densities and foliage consumption.3. In this study, we used a 5000-year-old chronosequence of forested islands in northern Sweden on which retrogression occurs in the absence of lightning-induced wildfire. We asked whether retrogression affected the abundance and herbivory of a dominant herbivorous weevil (Deporaus betulae) and the quality and productivity of a dominant host-tree, mountain birch (Betula pubescens).4. Betula pubescens trees on retrogressed islands were less productive and produced smaller, tougher leaves that were lower in nutrients and higher in secondary metabolites than did those trees on earlier-successional islands.5. Despite the lower density and what ecologists might perceive as poorer quality of host plants, we observed several-fold higher weevil abundance and damage on retrogressed islands. This suggests that weevils might prefer the poorer quality leaves with higher secondary metabolites that occur on nutrient stressed host trees.6. Our results show that ecosystem retrogression increases susceptibility of B. pubescens trees to attack by herbivorous weevils.7. Our study provides evidence that ecosystem retrogression and associated shifts in the quantity and quality of available resources can operate as an important driver of abundance of a dominant insect herbivore.
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| 5. |
- Davoine, Celine, et al.
(författare)
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Functional metabolomics as a tool to analyze Mediator function and structure in plants
- 2017
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Ingår i: PLOS ONE. - : Public Library Science. - 1932-6203. ; 12:6
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Tidskriftsartikel (refereegranskat)abstract
- Mediator is a multiprotein transcriptional co-regulator complex composed of four modules; Head, Middle, Tail, and Kinase. It conveys signals from promoter-bound transcriptional regulators to RNA polymerase II and thus plays an essential role in eukaryotic gene regulation. We describe subunit localization and activities of Mediator in Arabidopsis through metabolome and transcriptome analyses from a set of Mediator mutants. Functional metabolomic analysis based on the metabolite profiles of Mediator mutants using multivariate statistical analysis and heat-map visualization shows that different subunit mutants display distinct metabolite profiles, which cluster according to the reported localization of the corresponding subunits in yeast. Based on these results, we suggest localization of previously unassigned plant Mediator subunits to specific modules. We also describe novel roles for individual subunits in development, and demonstrate changes in gene expression patterns and specific metabolite levels in med18 and med25, which can explain their phenotypes. We find that med18 displays levels of phytoalexins normally found in wild type plants only after exposure to pathogens. Our results indicate that different Mediator subunits are involved in specific signaling pathways that control developmental processes and tolerance to pathogen infections.
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| 6. |
- Derba-Maceluch, Marta, et al.
(författare)
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Xylan glucuronic acid side chains fix suberin-like aliphatic compounds to wood cell walls
- 2023
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Ingår i: New Phytologist. - : John Wiley & Sons. - 0028-646X .- 1469-8137. ; 238:1, s. 297-312
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Tidskriftsartikel (refereegranskat)abstract
- Wood is the most important repository of assimilated carbon in the biosphere, in the form of large polymers (cellulose, hemicelluloses including glucuronoxylan, and lignin) that interactively form a composite, together with soluble extractives including phenolic and aliphatic compounds. Molecular interactions among these compounds are not fully understood.We have targeted the expression of a fungal α-glucuronidase to the wood cell wall of aspen (Populus tremula L. × tremuloides Michx.) and Arabidopsis (Arabidopsis thaliana (L.) Heynh), to decrease contents of the 4-O-methyl glucuronopyranose acid (mGlcA) substituent of xylan, to elucidate mGlcA's functions.The enzyme affected the content of aliphatic insoluble cell wall components having composition similar to suberin, which required mGlcA for binding to cell walls. Such suberin-like compounds have been previously identified in decayed wood, but here, we show their presence in healthy wood of both hardwood and softwood species. By contrast, γ-ester bonds between mGlcA and lignin were insensitive to cell wall-localized α-glucuronidase, supporting the intracellular formation of these bonds.These findings challenge the current view of the wood cell wall composition and reveal a novel function of mGlcA substituent of xylan in fastening of suberin-like compounds to cell wall. They also suggest an intracellular initiation of lignin–carbohydrate complex assembly.
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| 7. |
- Obudulu, Ogonna, et al.
(författare)
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A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of Populus trees
- 2018
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Ingår i: BMC Genomics. - : Springer Publishing Company. - 1471-2164. ; 19
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Tidskriftsartikel (refereegranskat)abstract
- Background: Secretory Carrier-Associated Membrane Proteins (SCAMPs) are highly conserved 32–38 kDa proteins that are involved in membrane trafficking. A systems approach was taken to elucidate function of SCAMPs in wood formation of Populus trees. Phenotypic and multi-omics analyses were performed in woody tissues of transgenic Populus trees carrying an RNAi construct for Populus tremula x tremuloides SCAMP3 (PttSCAMP3;Potri.019G104000).Results: The woody tissues of the transgenic trees displayed increased amounts of both polysaccharides and lignin oligomers, indicating increased deposition of both the carbohydrate and lignin components of the secondary cell walls. This coincided with a tendency towards increased wood density as well as significantly increased thickness of the suberized cork in the transgenic lines. Multivariate OnPLS (orthogonal projections to latent structures) modeling of five different omics datasets (the transcriptome, proteome, GC-MS metabolome, LC-MS metabolome and pyrolysis-GC/MS metabolome) collected from the secondary xylem tissues of the stem revealed systemic variation in the different variables in the transgenic lines, including changes that correlated with the changes in the secondary cell wall composition. The OnPLS model also identified a rather large number of proteins that were more abundant in the transgenic lines than in the wild type. Several of these were related to secretion and/or endocytosis as well as both primary and secondary cell wall biosynthesis.Conclusions: Populus SCAMP proteins were shown to influence accumulation of secondary cell wall components, including polysaccharides and phenolic compounds, in the woody tissues of Populus tree stems. Our multi-omics analyses combined with the OnPLS modelling suggest that this function is mediated by changes in membrane trafficking to fine-tune the abundance of cell wall precursors and/or proteins involved in cell wall biosynthesis and transport. The data provides a multi-level source of information for future studies on the function of the SCAMP proteins in plant stem tissues.
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| 8. |
- Sawaya, Alexandra C H F, et al.
(författare)
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HPLC-ESI-MS/MS of imidazole alkaloids in Pilocarpus microphyllus
- 2008
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Ingår i: Molecules. - Basel, Switzerland : MDPI AG. - 1431-5157 .- 1420-3049. ; 13:7, s. 1518-29
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Tidskriftsartikel (refereegranskat)abstract
- Pilocarpine, an important imidazole alkaloid, is extracted from the leaves of Pilocarpus microphyllus (Rutaceae), known in Brazil as jaborandi and used mainly for the treatment of glaucoma. Jaborandi leaves also contain other imidazole alkaloids, whose pharmacological and physiological properties are unknown, and whose biosynthetic pathways are under investigation. In the present study, a HPLC method coupled with ESI-MS(n) was developed for their qualitative and quantitative analysis. This method permits the chromatographic separation of the imidazole alkaloids found in extracts of jaborandi, as well as the MS/MS analysis of the individual compounds. Thus two samples: leaves of P. microphyllus and a paste that is left over after the industrial extraction of pilocarpine; were compared. The paste was found to contain significant amounts of pilocarpine and other imidazole alkaloids, but had a slightly different alkaloid profile than the leaf extract. The method is suitable for the routine analysis of samples containing these alkaloids, as well as for the separation and identification of known and novel alkaloids from this family, and may be applied to further studies of the biosynthetic pathway of pilocarpine in P. microphyllus.
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