| 1. |
- Niemi, MEK, et al.
(författare)
-
- 2021
-
swepub:Mat__t
|
|
| 2. |
- Kanai, M, et al.
(författare)
-
- 2023
-
swepub:Mat__t
|
|
| 3. |
- Namkoong, H, et al.
(författare)
-
DOCK2 is involved in the host genetics and biology of severe COVID-19
- 2022
-
Ingår i: Nature. - : Springer Science and Business Media LLC. - 1476-4687 .- 0028-0836. ; 609:7928, s. 754-
-
Tidskriftsartikel (refereegranskat)abstract
- Identifying the host genetic factors underlying severe COVID-19 is an emerging challenge1–5. Here we conducted a genome-wide association study (GWAS) involving 2,393 cases of COVID-19 in a cohort of Japanese individuals collected during the initial waves of the pandemic, with 3,289 unaffected controls. We identified a variant on chromosome 5 at 5q35 (rs60200309-A), close to the dedicator of cytokinesis 2 gene (DOCK2), which was associated with severe COVID-19 in patients less than 65 years of age. This risk allele was prevalent in East Asian individuals but rare in Europeans, highlighting the value of genome-wide association studies in non-European populations. RNA-sequencing analysis of 473 bulk peripheral blood samples identified decreased expression of DOCK2 associated with the risk allele in these younger patients. DOCK2 expression was suppressed in patients with severe cases of COVID-19. Single-cell RNA-sequencing analysis (n = 61 individuals) identified cell-type-specific downregulation of DOCK2 and a COVID-19-specific decreasing effect of the risk allele on DOCK2 expression in non-classical monocytes. Immunohistochemistry of lung specimens from patients with severe COVID-19 pneumonia showed suppressed DOCK2 expression. Moreover, inhibition of DOCK2 function with CPYPP increased the severity of pneumonia in a Syrian hamster model of SARS-CoV-2 infection, characterized by weight loss, lung oedema, enhanced viral loads, impaired macrophage recruitment and dysregulated type I interferon responses. We conclude that DOCK2 has an important role in the host immune response to SARS-CoV-2 infection and the development of severe COVID-19, and could be further explored as a potential biomarker and/or therapeutic target.
|
|
| 4. |
|
|
| 5. |
- Wang, QBS, et al.
(författare)
-
The whole blood transcriptional regulation landscape in 465 COVID-19 infected samples from Japan COVID-19 Task Force
- 2022
-
Ingår i: Nature communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 13:1, s. 4830-
-
Tidskriftsartikel (refereegranskat)abstract
- Coronavirus disease 2019 (COVID-19) is a recently-emerged infectious disease that has caused millions of deaths, where comprehensive understanding of disease mechanisms is still unestablished. In particular, studies of gene expression dynamics and regulation landscape in COVID-19 infected individuals are limited. Here, we report on a thorough analysis of whole blood RNA-seq data from 465 genotyped samples from the Japan COVID-19 Task Force, including 359 severe and 106 non-severe COVID-19 cases. We discover 1169 putative causal expression quantitative trait loci (eQTLs) including 34 possible colocalizations with biobank fine-mapping results of hematopoietic traits in a Japanese population, 1549 putative causal splice QTLs (sQTLs; e.g. two independent sQTLs at TOR1AIP1), as well as biologically interpretable trans-eQTL examples (e.g., REST and STING1), all fine-mapped at single variant resolution. We perform differential gene expression analysis to elucidate 198 genes with increased expression in severe COVID-19 cases and enriched for innate immune-related functions. Finally, we evaluate the limited but non-zero effect of COVID-19 phenotype on eQTL discovery, and highlight the presence of COVID-19 severity-interaction eQTLs (ieQTLs; e.g., CLEC4C and MYBL2). Our study provides a comprehensive catalog of whole blood regulatory variants in Japanese, as well as a reference for transcriptional landscapes in response to COVID-19 infection.
|
|
| 6. |
-
- 2018
-
Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 58:1
-
Forskningsöversikt (refereegranskat)
|
|
| 7. |
- Joffrin, E., et al.
(författare)
-
Overview of the JET preparation for deuterium-tritium operation with the ITER like-wall
- 2019
-
Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 59:11
-
Forskningsöversikt (refereegranskat)abstract
- For the past several years, the JET scientific programme (Pamela et al 2007 Fusion Eng. Des. 82 590) has been engaged in a multi-campaign effort, including experiments in D, H and T, leading up to 2020 and the first experiments with 50%/50% D-T mixtures since 1997 and the first ever D-T plasmas with the ITER mix of plasma-facing component materials. For this purpose, a concerted physics and technology programme was launched with a view to prepare the D-T campaign (DTE2). This paper addresses the key elements developed by the JET programme directly contributing to the D-T preparation. This intense preparation includes the review of the physics basis for the D-T operational scenarios, including the fusion power predictions through first principle and integrated modelling, and the impact of isotopes in the operation and physics of D-T plasmas (thermal and particle transport, high confinement mode (H-mode) access, Be and W erosion, fuel recovery, etc). This effort also requires improving several aspects of plasma operation for DTE2, such as real time control schemes, heat load control, disruption avoidance and a mitigation system (including the installation of a new shattered pellet injector), novel ion cyclotron resonance heating schemes (such as the three-ions scheme), new diagnostics (neutron camera and spectrometer, active Alfven eigenmode antennas, neutral gauges, radiation hard imaging systems...) and the calibration of the JET neutron diagnostics at 14 MeV for accurate fusion power measurement. The active preparation of JET for the 2020 D-T campaign provides an incomparable source of information and a basis for the future D-T operation of ITER, and it is also foreseen that a large number of key physics issues will be addressed in support of burning plasmas.
|
|
| 8. |
- Bombarda, F., et al.
(författare)
-
Runaway electron beam control
- 2019
-
Ingår i: Plasma Physics and Controlled Fusion. - : IOP Publishing. - 1361-6587 .- 0741-3335. ; 61:1
-
Tidskriftsartikel (refereegranskat)
|
|
| 9. |
- Krasilnikov, A., et al.
(författare)
-
Evidence of 9 Be + p nuclear reactions during 2ω CH and hydrogen minority ICRH in JET-ILW hydrogen and deuterium plasmas
- 2018
-
Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 58:2
-
Tidskriftsartikel (refereegranskat)abstract
- The intensity of 9Be + p nuclear fusion reactions was experimentally studied during second harmonic (2ω CH) ion-cyclotron resonance heating (ICRH) and further analyzed during fundamental hydrogen minority ICRH of JET-ILW hydrogen and deuterium plasmas. In relatively low-density plasmas with a high ICRH power, a population of fast H+ ions was created and measured by neutral particle analyzers. Primary and secondary nuclear reaction products, due to 9Be + p interaction, were observed with fast ion loss detectors, γ-ray spectrometers and neutron flux monitors and spectrometers. The possibility of using 9Be(p, d)2α and 9Be(p, α)6Li nuclear reactions to create a population of fast alpha particles and study their behaviour in non-active stage of ITER operation is discussed in the paper.
|
|
| 10. |
- Murari, A., et al.
(författare)
-
A control oriented strategy of disruption prediction to avoid the configuration collapse of tokamak reactors
- 2024
-
Ingår i: Nature Communications. - 2041-1723 .- 2041-1723. ; 15:1
-
Tidskriftsartikel (refereegranskat)abstract
- The objective of thermonuclear fusion consists of producing electricity from the coalescence of light nuclei in high temperature plasmas. The most promising route to fusion envisages the confinement of such plasmas with magnetic fields, whose most studied configuration is the tokamak. Disruptions are catastrophic collapses affecting all tokamak devices and one of the main potential showstoppers on the route to a commercial reactor. In this work we report how, deploying innovative analysis methods on thousands of JET experiments covering the isotopic compositions from hydrogen to full tritium and including the major D-T campaign, the nature of the various forms of collapse is investigated in all phases of the discharges. An original approach to proximity detection has been developed, which allows determining both the probability of and the time interval remaining before an incoming disruption, with adaptive, from scratch, real time compatible techniques. The results indicate that physics based prediction and control tools can be developed, to deploy realistic strategies of disruption avoidance and prevention, meeting the requirements of the next generation of devices.
|
|
| 11. |
|
|
| 12. |
|
|
| 13. |
|
|
| 14. |
|
|
| 15. |
|
|
| 16. |
|
|
| 17. |
|
|
| 18. |
|
|
| 19. |
|
|
| 20. |
|
|
| 21. |
|
|
| 22. |
|
|
| 23. |
|
|
| 24. |
|
|
| 25. |
|
|
| 26. |
|
|
| 27. |
|
|
| 28. |
|
|
| 29. |
|
|
| 30. |
|
|
| 31. |
|
|
| 32. |
|
|
| 33. |
|
|
| 34. |
-
Overview of the JET results
- 2015
-
Ingår i: Nuclear Fusion. - : IOP Publishing. - 0029-5515 .- 1741-4326. ; 55:10
-
Tidskriftsartikel (refereegranskat)
|
|
| 35. |
-
- 2018
-
Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 58:9
-
Tidskriftsartikel (refereegranskat)
|
|
| 36. |
|
|
| 37. |
|
|
| 38. |
|
|
| 39. |
|
|
| 40. |
- Ryu, Y. -H., et al.
(författare)
-
OGLE-2016-BLG-1190Lb : The First Spitzer Bulge Planet Lies Near the Planet/Brown-dwarf Boundary
- 2018
-
Ingår i: Astronomical Journal. - : American Astronomical Society. - 0004-6256 .- 1538-3881. ; 155:1
-
Tidskriftsartikel (refereegranskat)abstract
- We report the discovery of OGLE-2016-BLG-1190Lb, which is likely to be the first Spitzer microlensing planet in the Galactic bulge/ bar, an assignation that can be confirmed by two epochs of high-resolution imaging of the combined source-lens baseline object. The planet's mass, M-p = 13.4 +/- 0.9 M-J, places it right at the deuteriumburning limit, i. e., the conventional boundary between planets and brown dwarfs. Its existence raises the question of whether such objects are really planets (formed within the disks of their hosts) or failed stars (lowmass objects formed by gas fragmentation). This question may ultimately be addressed by comparing disk and bulge/bar planets, which is a goal of the Spitzer microlens program. The host is a G dwarf, M-host = 0.89. +/- 0.07 M-circle dot, and the planet has a semimajor axis a similar to 2.0 au. We use Kepler K2 Campaign 9 microlensing data to break the lens-mass degeneracy that generically impacts parallax solutions from Earth-Spitzer observations alone, which is the first successful application of this approach. The microlensing data, derived primarily from near-continuous, ultradense survey observations from OGLE, MOA, and three KMTNet telescopes, contain more orbital information than for any previous microlensing planet, but not quite enough to accurately specify the full orbit. However, these data do permit the first rigorous test of microlensing orbital-motion measurements, which are typically derived from data taken over < 1% of an orbital period.
|
|
| 41. |
- Lee, S., et al.
(författare)
-
Tritium distributions in castellated structures of Be limiter tiles from JET-ITER-like wall experiments
- 2023
-
Ingår i: Nuclear Fusion. - : IOP Publishing Ltd. - 0029-5515 .- 1741-4326. ; 63:4
-
Tidskriftsartikel (refereegranskat)abstract
- Tritium retention in the castellated structure of beryllium limiters used in JET with the ITER-like wall (ILW) during the first (ILW1), third (ILW3) and all three (ILW1-3) campaigns were examined and evaluated. Tritium was deposited on the surfaces inside the castellation grooves together with deuterium, beryllium, oxygen, carbon and small amounts of metallic impurities such as nickel, copper and tungsten. The tritium content after the ILW1 campaign was greater than after the ILW3 campaign. This is attributed to the steadily decreasing amount of carbon impurities in JET from campaign to campaign. The majority of tritium was retained in shallow regions in the grooves, up to 2 mm from the entrance to the gap. It was comparable on all sides of the castellation, i.e. no difference has been detected between the toroidal and poloidal gaps. Secondly, the tritium retention in the gaps was similar on all specimens independent of their position in the tokamak, while the retention on the plasma-facing surfaces clearly depended on the tile position. The tritium deposition patterns in the castellation were also compared with the deuterium distribution determined in earlier studies.
|
|
| 42. |
|
|
| 43. |
|
|
| 44. |
- Tokitani, M., et al.
(författare)
-
Surface morphology of the bulk tungsten divertor tiles from JET ITER-like wall
- 2020
-
Ingår i: Physica Scripta. - : IOP PUBLISHING LTD. - 0031-8949 .- 1402-4896. ; T171:1
-
Tidskriftsartikel (refereegranskat)abstract
- Surface characterization of bulk tungsten tiles (W lamellae) used during the first campaign of JET with the ITER-Like Wall (JET-ILW) was performed by means of microscopy and tritium imaging techniques. This is the first report regarding very detailed structural studies of W lamellae from the JET-ILW divertor. A special feature of the W lamellae installed in JET is the intrinsic network of micro-cracks detected on surfaces of the as-manufactured material. Analyses of different W lamellae samples on the plasma-facing surface reveal two types of surface structures caused by plasma impact: areas with strong erosion and regions of mild plasma interaction. In regions of strong erosion, a thin modified layer (thickness of similar to 20 nm) with a high density of defects including bubble-like structures has been formed. In addition, features indicating melting along edges of micro-cracks with the micro-scale plastic deformation have been identified.
|
|
| 45. |
- Ashikawa, N., et al.
(författare)
-
Determination of retained tritium from ILW dust particles in JET
- 2020
-
Ingår i: Nuclear Materials and Energy. - : Elsevier BV. - 2352-1791. ; 22
-
Tidskriftsartikel (refereegranskat)abstract
- Quantitative tritium inventory in dust particles from campaigns in the JET tokamak with the carbon wall (2007–2009) and the ITER-like wall (ILW 2011–2012) were determined by the liquid scintillation counter and the full combustion method. A feature of this full combustion method is that dust particles were covered by a tin (Sn) which reached 2100 K during combustion under oxygen flow. The specific tritium inventory for samples from JET with carbon and with metal walls was measured and found to be similar. However, the total tritium inventory in dust particles from the ILW experiment was significantly smaller in comparison to the carbon wall due to the lower amount of dust particles generated in the presence of metal walls.
|
|
| 46. |
- Bensby, T., et al.
(författare)
-
Chemical evolution of the Galactic bulge as traced by microlensed dwarf and subgiant stars : VI. Age and abundance structure of the stellar populations in the central sub-kpc of the Milky Way
- 2017
-
Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 605
-
Tidskriftsartikel (refereegranskat)abstract
- We present a detailed elemental abundance study of 90 F and G dwarf, turn-off, and subgiant stars in the Galactic bulge. Based on high-resolution spectra acquired during gravitational microlensing events, stellar ages and abundances for 11 elements (Na, Mg, Al, Si, Ca, Ti, Cr, Fe, Zn, Y and Ba) have been determined. Four main findings are presented: (1) a wide metallicity distribution with distinct peaks at [Fe/H] = -1.09, -0.63, -0.20, + 0.12, + 0.41; (2) a highfraction of intermediate-age to young stars where at [Fe/H] > 0 more than 35% are younger than 8 Gyr, and for [Fe/H] ≲-0.5 most stars are 10 Gyr or older; (3) several episodes of significant star formation in the bulge has been identified: 3, 6, 8, and 11 Gyr ago; (4) tentatively the "knee" in the α-element abundance trends of the sub-solar metallicity bulge is located at a slightly higher [Fe/H] than in the local thick disk. These findings show that the Galactic bulge has complex age and abundance properties that appear to be tightly connected to the main Galactic stellar populations. In particular, the peaks in the metallicity distribution, the star formation episodes, and the abundance trends, show similarities with the properties of the Galactic thin and thick disks. At the same time, the star formation rate appears to have been slightly faster in the bulge than in the local thick disk, which most likely is an indication of the denser stellar environment closer to the Galactic centre. There are also additional components not seen outside the bulge region, and that most likely can be associated with the Galactic bar. Our results strengthen the observational evidence that support the idea of a secular origin for the Galactic bulge, formed out of the other main Galactic stellar populations present in the central regions of our Galaxy. Additionally, our analysis of this enlarged sample suggests that the (V-I)0 colour of the bulge red clump should be revised to 1.09.
|
|
| 47. |
- Lee, S. E., et al.
(författare)
-
Global distribution of tritium in JET with the ITER-like wall
- 2021
-
Ingår i: Nuclear Materials and Energy. - : Elsevier BV. - 2352-1791. ; 26
-
Tidskriftsartikel (refereegranskat)abstract
- Nondestructive analysis of tritium (T) distribution was performed by means of imaging plate technique on specimens cut from the Be limiters, W-coated carbon tiles and bulk W lamellae retrieved from the JET tokamak after the first and third experimental campaigns with the ITER-like wall. Afterwards, analyses were continued using X-ray photoelectron spectroscopy, microscopy techniques and thermal desorption spectroscopy. Co-deposits formed on the W-coated tiles in the 1st campaign showed large T retention because of high carbon content reaching up to 50 atomic %, while the carbon fraction in co-deposits after the 3rd campaign was distinctly lower. The T retention of the plasma-facing surface of the bulk W tile was smaller than that of the W-coated tiles by a factor of 20, while deposition of small amount of T was found at the side surfaces facing to the gaps in a lamella structure. The correlation of T distributions with surface morphology and the discharge conditions is discussed.
|
|
| 48. |
- Masuzakil, S., et al.
(författare)
-
Analyses of microstructure, composition and retention of hydrogen isotopes in divertor tiles of JET with the ITER-like wall
- 2017
-
Ingår i: Physica Scripta. - : IOP PUBLISHING LTD. - 0031-8949 .- 1402-4896. ; T170
-
Tidskriftsartikel (refereegranskat)abstract
- Results of the comprehensive surface analyses of divertor tiles and dusts retrieved from JET after the first ITER-like wall campaign (2011-2012) are presented. The samples cored from the divertor tiles were analyzed. Numerous nano-size bubble-like structures were observed in the deposition layer on the apron of the inner divertor tile, and a beryllium dust with the same structures were found in the matter collected from the inner divertor after the campaign. This suggests that the nano-size bubble-like structures can make the deposition layer to become brittle and may lead to cracking followed by dust generation. X-ray photoelectron spectroscopy analyses of chemical states of species in the deposition layers identified the formation of beryllium-tungsten intermetallic compounds on an inner vertical tile. Different tritium retention profiles along the divertor tiles were observed at the top surfaces and at deeper regions of the tiles by using the imaging plate technique.
|
|
| 49. |
- Otsuka, T., et al.
(författare)
-
An overview of tritium retention in dust particles from the JET-ILW divertor
- 2022
-
Ingår i: Physica Scripta. - : IOP Publishing Ltd. - 0031-8949 .- 1402-4896. ; 97:2
-
Tidskriftsartikel (refereegranskat)abstract
- Tritium (T) retention characteristics in dust collected from the divertor in JET with ITER-like wall (JET-ILW) after the third campaign in 2015-2016 (ILW-3) have been examined in individual dust particles by combining radiography (tritium imaging plate technique) and electron probe micro-analysis. The results are summarized and compared with the data obtained after the first campaign in 2011-2012 (ILW-1). The dominant component in ILW-1 dust was carbon
|
|
| 50. |
- Otsuka, T., et al.
(författare)
-
Tritium retention characteristics in dust particles in JET with ITER-like wall
- 2018
-
Ingår i: Nuclear Materials and Energy. - : ELSEVIER SCIENCE BV. - 2352-1791. ; 17, s. 279-283
-
Tidskriftsartikel (refereegranskat)abstract
- A tritium imaging plate technique (TIPT) in combination with an electron-probe microscopic analysis (EPMA) were applied to examine tritium (T) retention characteristics in individual dust particles collected in the Joint European Torus with the ITER-like Wall (JET-ILW) after the first campaign in 2011-2012. A lot of carbon pre-existing carbon deposits in the JET-C or released carbon particles from the remaining carbon-fiber components in the JET-ILW. Most of T was retained at the surface of and/or in the C-dominated dust particles. The retention in tungsten, beryllium and other metal-dominated dust particles is relatively lower by a factor of 10-100 in comparison with that in the Cdominated particles.
|
|
