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Sökning: WFRF:(Bozkurt A.)

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1.
  • 2021
  • swepub:Mat__t
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  • 2021
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  • Bravo, L, et al. (författare)
  • 2021
  • swepub:Mat__t
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  • Tabiri, S, et al. (författare)
  • 2021
  • swepub:Mat__t
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  • Glasbey, JC, et al. (författare)
  • 2021
  • swepub:Mat__t
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  • Kutkin, A. M., et al. (författare)
  • Apertif 1.4 GHz continuum observations of the Boötes field and their combined view with LOFAR
  • 2023
  • Ingår i: Astronomy and Astrophysics. - 0004-6361 .- 1432-0746. ; 676
  • Tidskriftsartikel (refereegranskat)abstract
    • We present a new image of a 26.5 square degrees region in the Boötes constellation obtained at 1.4 GHz using the Aperture Tile in Focus (Apertif) system on the Westerbork Synthesis Radio Telescope. We use a newly developed processing pipeline that includes direction-dependent self-calibration, which provides a significant improvement in the quality of the images compared to those released as part of the Apertif first data release. For the Boötes region, we mosaicked 187 Apertif images and extracted a source catalog. The mosaic image has an angular resolution of 27 × 11.5″ and a median background noise of 40 μJy beam-1. The catalog has 8994 sources and is complete down to the 0.3 mJy level. We combined the Apertif image with LOFAR images of the Boötes field at 54 and 150 MHz to study the spectral properties of the sources. We find a spectral flattening toward sources with a low flux density. Using the spectral index limits from Apertif nondetections, we derive that up to 9% of the sources have ultrasteep spectra with a slope below -1.2. A steepening of the spectral index with increasing redshift is also seen in the data, which shows a different dependence for the low-and high-frequency spectral index. The explanation probably is that a population of sources has concave radio spectra with a turnover frequency of about the LOFAR band. Additionally, we discuss cases of individual extended sources with an interesting resolved spectral structure. With the improved pipeline, we aim to continue to process data from the Apertif wide-area surveys and release the improved 1.4-GHz images of several well-known fields.
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  • Ovadia, C., et al. (författare)
  • Association of adverse perinatal outcomes of intrahepatic cholestasis of pregnancy with biochemical markers: results of aggregate and individual patient data meta-analyses
  • 2019
  • Ingår i: The Lancet. - : Elsevier BV. - 0140-6736. ; 393:10174, s. 899-909
  • Tidskriftsartikel (refereegranskat)abstract
    • Background Intrahepatic cholestasis of pregnancy is associated with adverse perinatal outcomes, but the association with the concentration of specific biochemical markers is unclear. We aimed to quantify the adverse perinatal effects of intrahepatic cholestasis of pregnancy in women with increased serum bile acid concentrations and determine whether elevated bile acid concentrations were associated with the risk of stillbirth and preterm birth. Methods We did a systematic review by searching PubMed, Web of Science, and Embase databases for studies published from database inception to June 1, 2018, reporting perinatal outcomes for women with intrahepatic cholestasis of pregnancy when serum bile acid concentrations were available. Inclusion criteria were studies defining intrahepatic cholestasis of pregnancy based upon pruritus and elevated serum bile acid concentrations, with or without raised liver aminotransferase concentrations. Eligible studies were case-control, cohort, and population-based studies, and randomised controlled trials, with at least 30 participants, and that reported bile acid concentrations and perinatal outcomes. Studies at potential higher risk of reporter bias were excluded, including case reports, studies not comprising cohorts, or successive cases seen in a unit; we also excluded studies with high risk of bias from groups selected (eg, a subgroup of babies with poor outcomes were explicitly excluded), conference abstracts, and Letters to the Editor without clear peer review. We also included unpublished data from two UK hospitals. We did a random effects meta-analysis to determine risk of adverse perinatal outcomes. Aggregate data for maternal and perinatal outcomes were extracted from case-control studies, and individual patient data (IPD) were requested from study authors for all types of study (as no control group was required for the IPD analysis) to assess associations between biochemical markers and adverse outcomes using logistic and stepwise logistic regression. This study is registered with PROSPERO, number CRD42017069134. Findings We assessed 109 full-text articles, of which 23 studies were eligible for the aggregate data meta-analysis (5557 intrahepatic cholestasis of pregnancy cases and 165 136 controls), and 27 provided IPD (5269 intrahepatic cholestasis of pregnancy cases). Stillbirth occurred in 45 (0.83%) of 4936 intrahepatic cholestasis of pregnancy cases and 519 (0.32%) of 163 947 control pregnancies (odds ratio [OR] 1.46 [95% CI 0.73-2.89]; I-2 = 59.8%). In singleton pregnancies, stillbirth was associated with maximum total bile acid concentration (area under the receiver operating characteristic curve [ROC AUC]) 0.83 [95% CI 0.74-0.92]), but not alanine aminotransferase (ROC AUC 0.46 [0.35-0.57]). For singleton pregnancies, the prevalence of stillbirth was three (0.13%; 95% CI 0.02-0.38) of 2310 intrahepatic cholestasis of pregnancy cases in women with serum total bile acids of less than 40 mu mol/L versus four (0.28%; 0.08-0.72) of 1412 cases with total bile acids of 40-99 mu mol/L (hazard ratio [HR] 2.35 [95% CI 0.52-10.50]; p=0.26), and versus 18 (3.44%; 2.05-5.37) of 524 cases for bile acids of 100 mu mol/L or more (HR 30.50 [8.83-105.30]; p<0.0001). Interpretation The risk of stillbirth is increased in women with intrahepatic cholestasis of pregnancy and singleton pregnancies when serum bile acids concentrations are of 100 mu mol/L or more. Because most women with intrahepatic cholestasis of pregnancy have bile acids below this concentration, they can probably be reassured that the risk of stillbirth is similar to that of pregnant women in the general population, provided repeat bile acid testing is done until delivery. Funding Tommy's, ICP Support, UK National Institute of Health Research, Wellcome Trust, and Genesis Research Trust. Copyright (c) 2019 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license.
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  • Kavas, H., et al. (författare)
  • Synthesis and conductivity evaluation of PVTri-Fe3O4 nanocomposite
  • 2010
  • Ingår i: Journal of Non-Crystalline Solids. - : Elsevier BV. - 0022-3093 .- 1873-4812. ; 356:9-10, s. 484-489
  • Tidskriftsartikel (refereegranskat)abstract
    • Poly(1-vinyl-1,2,4-triazole) (PVTri)-Fe3O4 nanocomposite with conducting character was synthesized by a wet chemical process. PVTri has been freshly synthesized and coated/adsorbed on magnetite nanoparticles that are synthesized via a sonochemical route. The structure, morphology and electrical properties of the products were characterized by X-ray powder diffraction (XRD), Fourier transform infrared spectroscopy (FT-IR), Thermal gravimetric analysis (TGA), scanning electron microscopy (SEM) and Dielectric impedance spectroscopy, respectively. Crystallite size of magnetite was calculated by X-ray line profile fitting as 12 +/- 6 nm. FT-IR and TGA analysis confirm the adsorption of PVTri on magnetite nanoparticles. SEM micrographs revealed that Fe3O4 nanoparticles are slightly aggregated upon PVTri coating. Conductivity and permittivity measurements show the effect of glass transition temperature of polymer par in PVTri-Fe3O4 nanocomposite.
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  • Milikić, J., et al. (författare)
  • A Pt/MnV2O6 nanocomposite for the borohydride oxidation reaction
  • 2021
  • Ingår i: Journal of Energy Challenges and Mechanics. - : Elsevier B.V.. - 2056-9386. ; 55, s. 428-436
  • Tidskriftsartikel (refereegranskat)abstract
    • Problems associated with carbon support corrosion under operating fuel cell conditions require the identification of alternative supports for platinum-based nanosized electrocatalysts. Platinum supported on manganese vanadate (Pt/MnV2O6) was prepared by microwave irradiation method and characterized using X-ray diffraction, Fourier-transform infrared spectroscopy, X-ray photoelectron spectroscopy, scanning electron microscopy with energy dispersive spectroscopy, and transmission electron microscopy. The borohydride oxidation reaction (BOR) on Pt/MnV2O6 was studied in highly alkaline media using voltammetry, chronoamperometry, and electrochemical impedance spectroscopy. BOR electrocatalytic activity of Pt/MnV2O6 was also compared with that of commercial Pt/C (46 wt% Pt) electrocatalyst. The apparent activation energy of BOR at Pt/MnV2O6 was estimated to be 32 kJ mol−1 and the order of reaction to be 0.51, indicating that borohydride hydrolysis proceeds in parallel with its oxidation. Long-term stability of Pt/MnV2O6 under BOR typical conditions was observed. A laboratory-scale direct borohydride fuel cell assembled with a Pt/MnV2O6 anode reached a specific power of 274 W g−1. Experimental results on Pt/MnV2O6 were complemented by DFT calculations, which indicated good adherence of Pt to MnV2O6, beneficial for electrocatalyst stability.
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  • Farrow, R., et al. (författare)
  • GO-GN Conceptual Frameworks Guide
  • 2021
  • Bok (övrigt vetenskapligt/konstnärligt)abstract
    • If you’re a doctoral researcher (in any discipline) or someone who produces research in a professional capacity you’ve perhaps encountered the phrase “conceptual framework”. Sometimes a whole chapter of a Ph.D or Ed.D might be given over to investigating the relevance of different frameworks for an area of inquiry, or to synthesizing several frameworks together to ground the approach taken to answering a specific research question. Alternatively, you might not have heard much mention of conceptual frameworks or how they relate to what you are trying to achieve with your research. A conceptual framework brings together a set of ideas and articulates the different concepts that will be used in a study or research project. Because this is highly contextual - and often specific to a particular research question or approach - there aren’t really any general rules that cover how to do this. In addition, there is a lot of ambiguity and impreciseness in the language used to describe this stuff. Sometimes people talk about theoretical frameworks, or models, or a ‘theory of action’ that guides their research project. But do these mean different things? And are there differences between disciplines? In an empirical project the conceptual framework might be used to determine the kinds of questions to ask in a survey, or which data points to collect and focus on. A conceptual framework might be used to generate a hypothesis that is to be tested, or to facilitate the interpretation of results. On the qualitative side a conceptual framework might be used to provide the right kinds of descriptions at different stages of the research process; to identify or explore categories of analysis; or to guide and refine the conclusions drawn by a study. All of these things can happen in a single project! Given the importance and centrality of these frameworks, it might be surprising to learn that relatively little has been written about using them in research. There’s certainly a lot less published about this than research methods or methodology, for instance. (Though different methods often come with specific conceptual frameworks built in or with a more obvious alignment). So, to start making sense of all this we begin by looking at some of the papers that offer systematic guidance or understanding of the role of conceptual frameworks in research. As this guide progresses we’ll bring in perspectives from GO-GN members on their experiences with developing and using conceptual frameworks.
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  • Haas, Brian J., et al. (författare)
  • Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
  • 2009
  • Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 461:7262, s. 393-398
  • Tidskriftsartikel (refereegranskat)abstract
    • Phytophthora infestans is the most destructive pathogen of potato and a model organism for the oomycetes, a distinct lineage of fungus-like eukaryotes that are related to organisms such as brown algae and diatoms. As the agent of the Irish potato famine in the mid-nineteenth century, P. infestans has had a tremendous effect on human history, resulting in famine and population displacement(1). To this day, it affects world agriculture by causing the most destructive disease of potato, the fourth largest food crop and a critical alternative to the major cereal crops for feeding the world's population(1). Current annual worldwide potato crop losses due to late blight are conservatively estimated at $6.7 billion(2). Management of this devastating pathogen is challenged by its remarkable speed of adaptation to control strategies such as genetically resistant cultivars(3,4). Here we report the sequence of the P. infestans genome, which at similar to 240 megabases (Mb) is by far the largest and most complex genome sequenced so far in the chromalveolates. Its expansion results from a proliferation of repetitive DNA accounting for similar to 74% of the genome. Comparison with two other Phytophthora genomes showed rapid turnover and extensive expansion of specific families of secreted disease effector proteins, including many genes that are induced during infection or are predicted to have activities that alter host physiology. These fast-evolving effector genes are localized to highly dynamic and expanded regions of the P. infestans genome. This probably plays a crucial part in the rapid adaptability of the pathogen to host plants and underpins its evolutionary potential.
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  • Kurtan, U., et al. (författare)
  • Influence of calcination rate on morphologies and magnetic properties of MnFe2O4 nanofibers
  • 2016
  • Ingår i: Ceramics International. - : Elsevier. - 0272-8842 .- 1873-3956. ; 42:16, s. 18189-18195
  • Tidskriftsartikel (refereegranskat)abstract
    • In the present study, we succesfully synthesized electrospun MnFe2O4 nanofibers (NFs) from poly(N-vinylpyrrolidone)/manganese(II) nitrate composite by electrospinning and then as-spun NFs were calcined 450 degrees C for 2 h in air atmosphere to remove the polymer matrix and fabricate inorganic MnFe2O4 nanofibers. In order to investigate the sintering behavior of MnFe2O4 nanofibers in air atmosphere, the synthesized as-spun nanofibers were calcined with different calcination rates. Thus the effect of calcination rate on structure and morphology of nanofibers were discussed clearly. The structural, magnetic, morphological, spectroscopic and thermal characterizations were also done by XRD, VSM, TEM, SEM, FTIR and TG analysis. In the presence of slow calcination rate, only peaks of MnFe2O4 could be observed on other hand in the presence of rapid calcination rate, formation of an impurity was observed. Scanning electron microscope images revealed that MnFe2O4 nanorods possess a broader range size distribution with higher particle size. Also, magnetic properties were both size and shape dependent.
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  • Sertkol, M., et al. (författare)
  • Microwave synthesis and characterization of Zn-doped nickel ferrite nanoparticles
  • 2009
  • Ingår i: Journal of Alloys and Compounds. - : Elsevier BV. - 0925-8388 .- 1873-4669. ; 486:1-2, s. 325-329
  • Tidskriftsartikel (refereegranskat)abstract
    • Microwave assisted combustion method was used to synthesize nanocrystalline ZnxNi1-xFe2O4 from a stoichiometric mixture of corresponding metal nitrates and urea powders. The structural, chemical and magnetic properties of Ni-Zn ferrite was determined by X-ray powder diffraction (XRD), transmission electron microscopy (TEM), infrared spectroscopy (FTIR), vibrating sample magnetometry (VSM) and DC conductivity measurements. Results showed that the material was spinel structure with a high purity with an estimated crystallite size of similar to 20 nm by X-ray line profile fitting. TEM analysis showed necked near-spherical particles with an average size of similar to 20 nm, reflecting highly crystalline nature of these nanoparticles. Magnetic properties showed anomalities as the Zn doping level increased. This has been explained and attributed to the relative positions of Ni, Zn, and Fe ions in the crystal lattice.
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  • Unal, B., et al. (författare)
  • Synthesis, dielectric and magnetic characteristics of poly(1-vinyl-1,2,4-triazole) (PVTri)-barium hexaferrite composite
  • 2011
  • Ingår i: Journal of Alloys and Compounds. - : Elsevier BV. - 0925-8388 .- 1873-4669. ; 509:32, s. 8199-8206
  • Tidskriftsartikel (refereegranskat)abstract
    • The production of PVTri-BaFe(12)O(19) composites was carried out by in situ polymerization of PVTri in the presence of synthesized BaFe(12)O(19) particles. Crystalline phase was determined as BaFe(12)O(19) by XRD analysis and thermal analysis revealed an inorganic content of similar to 45% in the composite. SEM and TEM analyses showed strongly agglomerated particles in the range of 200 nm to several micrometers in the composite. The dielectric function of the various temperatures showed frequency dependency in a reciprocal power law. The dissipation (or loss) of energy stored within the composite was found to obey the reciprocal rule of power law of the frequency dependency. The real part of electrical modulus formalism increased exponentially with frequency for various temperatures, reaching a constant value and finally saturated. The imaginary part showed a reciprocal power law against the applied frequency and shifted to higher frequency at elevated temperatures. Magnetization measurements revealed substantially lower saturation magnetization of the composite material as compared to the bulk barium ferrite powders, possibly due to pinning of some of the surface spins by the adsorption of the PVTri molecules to the surface of the BaFe(12)O(19).
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  • Avaz, S., et al. (författare)
  • Graphene based nanosensor for aqueous phase detection of nitroaromatics
  • 2017
  • Ingår i: RSC Advances. - : Royal Society of Chemistry (RSC). - 2046-2069. ; 7:41, s. 25519-25527
  • Tidskriftsartikel (refereegranskat)abstract
    • A graphene-based nanosensor was fabricated to selectively detect nitrotriazolone (NTO) molecules with a molecularly imprinted film via simple electrical measurements. Molecularly imprinted polymer comprising chitosan was used as sensitive layer. Gold electrodes for electrical measurements were lithographically fabricated on Si/SiO2 substrate, followed by monolayer graphene transfer and polymeric film coating. Monolayer graphene and molecularly imprinted polymer were characterized by ATR-FTIR, UV-Vis, SEM and Raman spectroscopy. Transfer-length measurements (TLM) indicate that the sensor selectively and linearly responds against aqueous NTO solutions within a wide range of concentration of 0.01-0.1 mg mL(-1) that covers the lowest toxic level of NTO determined by USEPA. This nanosensor with embedded electrodes is re-usable and suitable for field applications, offering real-time electrical measurements unlike current techniques where complex analytics are required.
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  • Boudreau, Mathieu, et al. (författare)
  • Repeat it without me: Crowdsourcing the T1 mapping common ground via the ISMRM reproducibility challenge
  • 2024
  • Ingår i: MAGNETIC RESONANCE IN MEDICINE. - 0740-3194 .- 1522-2594. ; 92:3, s. 1115-1127
  • Tidskriftsartikel (refereegranskat)abstract
    • Purpose T-1 mapping is a widely used quantitative MRI technique, but its tissue-specific values remain inconsistent across protocols, sites, and vendors. The ISMRM Reproducible Research and Quantitative MR study groups jointly launched a challenge to assess the reproducibility of a well-established inversion-recovery T-1 mapping technique, using acquisition details from a seminal T-1 mapping paper on a standardized phantom and in human brains. Methods The challenge used the acquisition protocol from Barral et al. (2010). Researchers collected T-1 mapping data on the ISMRM/NIST phantom and/or in human brains. Data submission, pipeline development, and analysis were conducted using open-source platforms. Intersubmission and intrasubmission comparisons were performed. Results Eighteen submissions (39 phantom and 56 human datasets) on scanners by three MRI vendors were collected at 3 T (except one, at 0.35 T). The mean coefficient of variation was 6.1% for intersubmission phantom measurements, and 2.9% for intrasubmission measurements. For humans, the intersubmission/intrasubmission coefficient of variation was 5.9/3.2% in the genu and 16/6.9% in the cortex. An interactive dashboard for data visualization was also eveloped: https://rrsg2020.dashboards.neurolibre.org. Conclusion The T-1 intersubmission variability was twice as high as the intrasubmission variability in both phantoms and human brains, indicating that the acquisition details in the original paper were insufficient to reproduce a quantitative MRI protocol. This study reports the inherent uncertainty in T-1 measures across independent research groups, bringing us one step closer to a practical clinical baseline of T-1 variations in vivo.
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  • Bozkurt, M., et al. (författare)
  • Magnetic anisotropy of single Mn acceptors in GaAs in an external magnetic field
  • 2013
  • Ingår i: Physical Review B. Condensed Matter and Materials Physics. - : American Physical society. - 1098-0121 .- 1550-235X. ; 88, s. Article ID: 205203-
  • Tidskriftsartikel (refereegranskat)abstract
    • We investigate the effect of an external magnetic field on the physical properties of the acceptor hole statesassociated with single Mn acceptors placed near the (110) surface of GaAs. Cross-sectional scanning tunnelingmicroscopy images of the acceptor local density of states (LDOS) show that the strongly anisotropic hole wavefunction is not significantly affected by a magnetic field up to 6 T. These experimental results are supported bytheoretical calculations based on a tight-binding model of Mn acceptors in GaAs. For Mn acceptors on the (110)surface and the subsurfaces immediately underneath, we find that an applied magnetic field modifies significantlythe magnetic anisotropy landscape. However, the acceptor hole wave function is strongly localized around theMn and the LDOS is quite independent of the direction of the Mn magnetic moment. On the other hand, for Mnacceptors placed on deeper layers below the surface, the acceptor hole wave function is more delocalized andthe corresponding LDOS is much more sensitive on the direction of the Mn magnetic moment. However, themagnetic anisotropy energy for these magnetic impurities is large (up to 15 meV), and a magnetic field of 10 Tcan hardly change the landscape and rotate the direction of the Mn magnetic moment away from its easy axis.We predict that substantially larger magnetic fields are required to observe a significant field dependence of thetunneling current for impurities located several layers below the GaAs surface.
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  • d’Alessandro, N., et al. (författare)
  • RAMCESS 2.x FRAMEWORK - EXPRESSIVE VOICE ANALYSIS FOR REALTIME AND ACCURATE SYNTHESIS OF SINGING
  • 2008
  • Ingår i: Journal on Multimodal User Interfaces. - : Springer. - 1783-7677 .- 1783-8738. ; 2, s. 133-144
  • Tidskriftsartikel (refereegranskat)abstract
    • In this paper we present the work that has been achieved in the context of the second version of the RAMCESS singing synthesis framework. The main improvement of this study is the integration of new algorithms for expressive voice analysis, especially the separation of the glottal source and the vocal tract. Realtime synthesis modules have also been refined. These elements have been integrated in an existing digital instrument: the HANDSKETCH 1.X, a bimanual controller. Moreover this digital instrument is compared to existing systems.
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