| 1. |
- Caesar, Sofia, et al.
(författare)
-
Diversity and relatedness enhance survival in colour polymorphic grasshoppers
- 2010
-
Ingår i: PLOS ONE. - : Public Library of Science (PLoS). - 1932-6203. ; 5:5
-
Tidskriftsartikel (refereegranskat)abstract
- Evolutionary theory predicts that different resource utilization and behaviour by alternative phenotypes may reduce competition and enhance productivity and individual performance in polymorphic, as compared with monomorphic, groups of individuals. However, firm evidence that members of more heterogeneous groups benefit from enhanced survival has been scarce or lacking. Furthermore, benefits associated with phenotypic diversity may be counterbalanced by costs mediated by reduced relatedness, since closely related individuals typically are more similar. Pygmy grasshoppers (Tetrix subulata) are characterized by extensive polymorphism in colour pattern, morphology, behaviour and physiology. We studied experimental groups founded by different numbers of mothers and found that survival was higher in low than in high density, that survival peaked at intermediate colour morph diversity in high density, and that survival was independent of diversity in low density where competition was less intense. We further demonstrate that survival was enhanced by relatedness, as expected if antagonistic and competitive interactions are discriminately directed towards non-siblings. We therefore also performed behavioural observations and staged encounters which confirmed that individuals recognized and responded differently to siblings than to non-siblings. We conclude that negative effects associated with competition are less manifest in diverse groups, that there is conflicting selection for and against genetic diversity occurring simultaneously, and that diversity and relatedness may facilitate the productivity and ecological success of groups of interacting individuals.
|
|
| 2. |
- Caesar, Sofia, et al.
(författare)
-
Do polyandrous pygmy grasshopper females obtain fitness benefits for their offspring?
- 2009
-
Ingår i: Behavioral Ecology. - : Oxford University Press (OUP). - 1045-2249 .- 1465-7279. ; 20:2, s. 354-361
-
Tidskriftsartikel (refereegranskat)abstract
- Explanations for polyandry in insects invoke material and genetic benefits that enhance female fitness via the production of more viable or more variable offspring. Here we use the color polymorphic pygmy grasshopper, Tetrix subulata, to evaluate effects of male quality, mate color morph resemblance (a proxy for compatibility), and polyandry on offspring performance. We experimentally mated females with different numbers and color morph combinations of males and reared offspring under either sun-exposed or shaded conditions using a split-brood design. We find a significant male identity effect on egg hatchability, consistent with the hypothesis that males vary in paternal quality. Offspring viability posthatching varied in a complex manner with solar regime, mating treatment, and parental resemblance. The effects of parental color morph resemblance on offspring performance suggest a potential role of compatibility and offspring variability. Monandrous females produced more viable offspring than polyandrous females (under shaded conditions) and we suggest as a hypothesis that the expected positive influence of polyandry on offspring performance may have been outweighed by more intense competition and antagonistic interactions among half-siblings. That an effect of mating treatment was evident under shaded but not under sun-exposed conditions suggests that great care is called for when making inferences from studies that show negative results.
|
|
| 3. |
|
|
| 4. |
- Campbell, PJ, et al.
(författare)
-
Pan-cancer analysis of whole genomes
- 2020
-
Ingår i: Nature. - : Springer Science and Business Media LLC. - 1476-4687 .- 0028-0836. ; 578:7793, s. 82-
-
Tidskriftsartikel (refereegranskat)abstract
- Cancer is driven by genetic change, and the advent of massively parallel sequencing has enabled systematic documentation of this variation at the whole-genome scale1–3. Here we report the integrative analysis of 2,658 whole-cancer genomes and their matching normal tissues across 38 tumour types from the Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium of the International Cancer Genome Consortium (ICGC) and The Cancer Genome Atlas (TCGA). We describe the generation of the PCAWG resource, facilitated by international data sharing using compute clouds. On average, cancer genomes contained 4–5 driver mutations when combining coding and non-coding genomic elements; however, in around 5% of cases no drivers were identified, suggesting that cancer driver discovery is not yet complete. Chromothripsis, in which many clustered structural variants arise in a single catastrophic event, is frequently an early event in tumour evolution; in acral melanoma, for example, these events precede most somatic point mutations and affect several cancer-associated genes simultaneously. Cancers with abnormal telomere maintenance often originate from tissues with low replicative activity and show several mechanisms of preventing telomere attrition to critical levels. Common and rare germline variants affect patterns of somatic mutation, including point mutations, structural variants and somatic retrotransposition. A collection of papers from the PCAWG Consortium describes non-coding mutations that drive cancer beyond those in the TERT promoter4; identifies new signatures of mutational processes that cause base substitutions, small insertions and deletions and structural variation5,6; analyses timings and patterns of tumour evolution7; describes the diverse transcriptional consequences of somatic mutation on splicing, expression levels, fusion genes and promoter activity8,9; and evaluates a range of more-specialized features of cancer genomes8,10–18.
|
|
| 5. |
- Forslund, Sofia K., et al.
(författare)
-
Combinatorial, additive and dose-dependent drug–microbiome associations
- 2021
-
Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 600:7889, s. 500-505
-
Tidskriftsartikel (refereegranskat)abstract
- During the transition from a healthy state to cardiometabolic disease, patients become heavily medicated, which leads to an increasingly aberrant gut microbiome and serum metabolome, and complicates biomarker discovery1–5. Here, through integrated multi-omics analyses of 2,173 European residents from the MetaCardis cohort, we show that the explanatory power of drugs for the variability in both host and gut microbiome features exceeds that of disease. We quantify inferred effects of single medications, their combinations as well as additive effects, and show that the latter shift the metabolome and microbiome towards a healthier state, exemplified in synergistic reduction in serum atherogenic lipoproteins by statins combined with aspirin, or enrichment of intestinal Roseburia by diuretic agents combined with beta-blockers. Several antibiotics exhibit a quantitative relationship between the number of courses prescribed and progression towards a microbiome state that is associated with the severity of cardiometabolic disease. We also report a relationship between cardiometabolic drug dosage, improvement in clinical markers and microbiome composition, supporting direct drug effects. Taken together, our computational framework and resulting resources enable the disentanglement of the effects of drugs and disease on host and microbiome features in multimedicated individuals. Furthermore, the robust signatures identified using our framework provide new hypotheses for drug–host–microbiome interactions in cardiometabolic disease.
|
|
| 6. |
|
|
| 7. |
- Forsman, Anders, et al.
(författare)
-
Fitness benefits of diverse offspring in pygmy grasshoppers
- 2007
-
Ingår i: Evolutionary Ecology Research. ; 9:8, s. 1305-1318
-
Tidskriftsartikel (refereegranskat)abstract
- Question: Do females obtain fitness benefits from an increase in offspring diversity?Hypotheses: Polyandry increases offspring diversity within a clutch. Increased offspring diversity will reduce competition among siblings (manifested as increased mean survival in more diverse families) and the probability that all offspring might be ill-suited to future conditions (manifested as lower variance in survival in diverse families).Organisms: Pygmy grasshoppers, Tetrix subulata and Tetrix: undulata, that are polymorphic for colour pattern.Field site: South-central Sweden.Methods: We varied the number of mates provided to colour polymorphic pygmy grasshoppers. We reared families in either warm or cold conditions using a split-brood design.Conclusions: The colour morph diversity of broods increased with the number of experimentally provided mates. Colour morphs represent alternative strategies that differ in body size, physiology, behaviour, and life history. Survival increased with increasing sibling diversity, supporting the hypothesis that different morphs avoid competition by using different subsets of available resources. Homogeneous families (in which all siblings belong to the same or only a few colour morphs) varied more in survival than did families with diverse siblings, supporting the hypothesis that morphs vary in their ability to cope with and utilize different resources.
|
|
| 8. |
- Forsman, Anders, et al.
(författare)
-
Variation in founder groups promotes establishment success in the wild
- 2012
-
Ingår i: Proceedings of the Royal Society of London. Biological Sciences. - : The Royal Society. - 0962-8452 .- 1471-2954. ; 279:1739, s. 2800-2806
-
Tidskriftsartikel (refereegranskat)abstract
- Environmental changes currently pose severe threats to biodiversity, and reintroductions and translocations are increasingly used to protect declining populations and species from extinction. Theory predicts that establishment success should be higher for more variable groups of dissimilar individuals. To test this ‘diversity promotes establishment’ hypothesis, we introduced colour polymorphic pygmy grasshoppers (Tetrix subulata) to different sites in the wild. The number of descendants found at the release sites the subsequent year increased with increasing number of colour morphs in the founder group, and variation in founder groups also positively affected colour morph diversity in the established populations. Since colour morphs differ in morphology, physiology, behaviour, reproductive life history and types of niche used, these findings demonstrate that variation among individuals in functionally important traits promotes establishment success under natural conditions, and further indicate that founder diversity may contribute to evolutionary rescue and increased population persistence.
|
|
| 9. |
- Johansson, Jenny, et al.
(författare)
-
Multiple paternity increases phenotypic diversity in Tetrix subulata pygmy grasshoppers
- 2013
-
Ingår i: Journal of Orthoptera Research. - : Pensoft Publishers. - 1082-6467 .- 1937-2426. ; 22:2, s. 79-85
-
Tidskriftsartikel (refereegranskat)abstract
- Multiple paternity within clutches has been recorded among a variety of organisms. The degree of genetic similarity between parents may influence the number and viability of offspring. Females may therefore mate with several males as an insurance against sterile, low quality or genetically incompatible mates, but also to obtain half sibling offspring that are genetically and phenotypically more diverse. We examine the links between polyandry, multiple paternity and offspring phenotypic diversity in the color polymorphic pygmy grasshopper Tetrix subulata. By experimentally mating virgin females and genotyping the resulting offspring using microsatellite markers, we demonstrate that polyandrous females can produce offspring sired by different males. Analyses of microsatellite data and color patterns of captive reared families produced by wild caught females that were not mated in the laboratory, confirmed that multiple paternity occurs in the wild, and that it may increase color morph diversity among half-siblings. Polyandrous mating behavior may thus influence the evolutionary dynamics and maintenance of color polymorphism in this species.
|
|
| 10. |
|
|
| 11. |
- Karlsson, Magnus, 1971-, et al.
(författare)
-
No evidence for developmental plasticity of colour patterns in response to rearing substrate in pygmy grasshoppers
- 2009
-
Ingår i: Canadian Journal of Zoology. - 0008-4301 .- 1480-3283. ; 87:11, s. 1044-1051
-
Tidskriftsartikel (refereegranskat)abstract
- Color polymorphisms in animals may result from genetic polymorphisms, developmental plasticity, or a combination where some phenotypic components are under strong genetic control and other aspects are influenced by developmental plasticity. Understanding how color polymorphisms evolve demands knowledge of how genetic and epigenetic environmental cues influence the development and phenotypic expression of organisms. Pygmy grasshoppers (Orthoptera, Tetrigidae) vary in color pattern within and among populations. Color morphs differ in morphology, behavior, and life history, suggesting that they represent alternative ecological strategies. Pygmy grasshoppers also show fire melanism, a rapid increase in the frequency of black and dark-colored phenotypes in populations inhabiting fire-ravaged areas. We examined the influence of plasticity on color polymorphism in the pygmy grasshopper Tetrix subulata (L., 1761) using a split-brood design. Individuals were experimentally raised in solitude on either crushed charcoal or white aquarium gravel. Our analyses uncovered no plasticity of either color pattern or overall darkness of coloration in response to rearing substrate. Instead, we find a strong resemblance between maternal and offspring color patterns. We conclude that pygmy grasshopper color morphs are strongly influenced by genetic cues or maternal effects, and that there is no evidence for developmental plasticity of coloration in response to rearing conditions in these insects.
|
|
| 12. |
- Schöler, Marc, 1987, et al.
(författare)
-
The interplay between dietary fatty acids and gut microbiota influences host metabolism and hepatic steatosis
- 2023
-
Ingår i: NATURE COMMUNICATIONS. - 2041-1723. ; 14:1
-
Tidskriftsartikel (refereegranskat)abstract
- Dietary lipids can affect metabolic health through gut microbiota-mediated mechanisms, but the influence of lipid-microbiota interaction on liver steatosis is largely unknown. We investigate the impact of dietary lipids on human gut microbiota composition and the effects of microbiota-lipid interactions on steatosis in male mice. In humans, low intake of saturated fatty acids (SFA) is associated with increased microbial diversity independent of fiber intake. In mice, poorly absorbed dietary long-chain SFA, particularly stearic acid, induce a shift in bile acid profile and improved metabolism and steatosis. These benefits are dependent on the gut microbiota, as they are transmitted by microbial transfer. Diets enriched in polyunsaturated fatty acids are protective against steatosis but have minor influence on the microbiota. In summary, we find that diets enriched in poorly absorbed long-chain SFA modulate gut microbiota profiles independent of fiber intake, and this interaction is relevant to improve metabolism and decrease liver steatosis. Here, Schoeler et al. investigate how interaction between dietary lipids and the gut microbiota affect hepatic steatosis and host metabolism, showing that dietary lipids impact the gut microbiota composition independent on fiber intake in humans and mice.
|
|
