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Numrering	Referens	Omslagsbild	Hitta
1.	2019 Tidskriftsartikel (refereegranskat)
2.	Bouyoucef, S E, et al. (författare) Poster Session 2 : Monday 4 May 2015, 08 2015 Ingår i: European Heart Journal Cardiovascular Imaging. - : Oxford University Press (OUP). - 2047-2404 .- 2047-2412. ; 16 Suppl 1 Tidskriftsartikel (refereegranskat)
3.	De Angelis, A., et al. (författare) Science with e-ASTROGAM A space mission for MeV-GeV gamma-ray astrophysics 2018 Ingår i: Journal of High Energy Astrophysics. - : Elsevier. - 2214-4048 .- 2214-4056. ; 19, s. 1-106 Tidskriftsartikel (refereegranskat)abstract e-ASTROGAM ('enhanced ASTROGAM') is a breakthrough Observatory space mission, with a detector composed by a Silicon tracker, a calorimeter, and an anticoincidence system, dedicated to the study of the non-thermal Universe in the photon energy range from 0.3 MeV to 3 GeV - the lower energy limit can be pushed to energies as low as 150 keV for the tracker, and to 30 keV for calorimetric detection. The mission is based on an advanced space-proven detector technology, with unprecedented sensitivity, angular and energy resolution, combined with polarimetric capability. Thanks to its performance in the MeV-GeV domain, substantially improving its predecessors, e-ASTROGAM will open a new window on the non-thermal Universe, making pioneering observations of the most powerful Galactic and extragalactic sources, elucidating the nature of their relativistic outflows and their effects on the surroundings. With a line sensitivity in the MeV energy range one to two orders of magnitude better than previous generation instruments, e-ASTROGAM will determine the origin of key isotopes fundamental for the understanding of supernova explosion and the chemical evolution of our Galaxy. The mission will provide unique data of significant interest to a broad astronomical community, complementary to powerful observatories such as LIGO-Virgo-GEO600-KAGRA, SKA, ALMA, E-ELT, TMT, LSST, JWST, Athena, CTA, IceCube, KM3NeT, and LISA.
4.	Huyghe, Jeroen R., et al. (författare) Discovery of common and rare genetic risk variants for colorectal cancer 2019 Ingår i: Nature Genetics. - : Nature Publishing Group. - 1061-4036 .- 1546-1718. ; 51:1, s. 76- Tidskriftsartikel (refereegranskat)abstract To further dissect the genetic architecture of colorectal cancer (CRC), we performed whole-genome sequencing of 1,439 cases and 720 controls, imputed discovered sequence variants and Haplotype Reference Consortium panel variants into genome-wide association study data, and tested for association in 34,869 cases and 29,051 controls. Findings were followed up in an additional 23,262 cases and 38,296 controls. We discovered a strongly protective 0.3% frequency variant signal at CHD1. In a combined meta-analysis of 125,478 individuals, we identified 40 new independent signals at P < 5 x 10(-8), bringing the number of known independent signals for CRC to similar to 100. New signals implicate lower-frequency variants, Kruppel-like factors, Hedgehog signaling, Hippo-YAP signaling, long noncoding RNAs and somatic drivers, and support a role for immune function. Heritability analyses suggest that CRC risk is highly polygenic, and larger, more comprehensive studies enabling rare variant analysis will improve understanding of biology underlying this risk and influence personalized screening strategies and drug development.
5.	Wheeler, Eleanor, et al. (författare) Impact of common genetic determinants of Hemoglobin A1c on type 2 diabetes risk and diagnosis in ancestrally diverse populations : A transethnic genome-wide meta-analysis 2017 Ingår i: PLoS Medicine. - : PUBLIC LIBRARY SCIENCE. - 1549-1277 .- 1549-1676. ; 14:9 Tidskriftsartikel (refereegranskat)abstract Background: Glycated hemoglobin (HbA1c) is used to diagnose type 2 diabetes (T2D) and assess glycemic control in patients with diabetes. Previous genome-wide association studies (GWAS) have identified 18 HbA1c-associated genetic variants. These variants proved to be classifiable by their likely biological action as erythrocytic (also associated with erythrocyte traits) or glycemic (associated with other glucose-related traits). In this study, we tested the hypotheses that, in a very large scale GWAS, we would identify more genetic variants associated with HbA1c and that HbA1c variants implicated in erythrocytic biology would affect the diagnostic accuracy of HbA1c. We therefore expanded the number of HbA1c-associated loci and tested the effect of genetic risk-scores comprised of erythrocytic or glycemic variants on incident diabetes prediction and on prevalent diabetes screening performance. Throughout this multiancestry study, we kept a focus on interancestry differences in HbA1c genetics performance that might influence race-ancestry differences in health outcomes.Methods & findings: Using genome-wide association meta-analyses in up to 159,940 individuals from 82 cohorts of European, African, East Asian, and South Asian ancestry, we identified 60 common genetic variants associated with HbA1c. We classified variants as implicated in glycemic, erythrocytic, or unclassified biology and tested whether additive genetic scores of erythrocytic variants (GS-E) or glycemic variants (GS-G) were associated with higher T2D incidence in multiethnic longitudinal cohorts (N = 33,241). Nineteen glycemic and 22 erythrocytic variants were associated with HbA1c at genome-wide significance. GS-G was associated with higher T2D risk (incidence OR = 1.05, 95% CI 1.04-1.06, per HbA1c-raising allele, p = 3 x 10-29); whereas GS-E was not (OR = 1.00, 95% CI 0.99-1.01, p = 0.60). In Europeans and Asians, erythrocytic variants in aggregate had only modest effects on the diagnostic accuracy of HbA1c. Yet, in African Americans, the X-linked G6PD G202A variant (T-allele frequency 11%) was associated with an absolute decrease in HbA1c of 0.81%-units (95% CI 0.66-0.96) per allele in hemizygous men, and 0.68%-units (95% CI 0.38-0.97) in homozygous women. The G6PD variant may cause approximately 2% (N = 0.65 million, 95% CI0.55-0.74) of African American adults with T2Dto remain undiagnosed when screened with HbA1c. Limitations include the smaller sample sizes for non-European ancestries and the inability to classify approximately one-third of the variants. Further studies in large multiethnic cohorts with HbA1c, glycemic, and erythrocytic traits are required to better determine the biological action of the unclassified variants.Conclusions: As G6PD deficiency can be clinically silent until illness strikes, we recommend investigation of the possible benefits of screening for the G6PD genotype along with using HbA1c to diagnose T2D in populations of African ancestry or groups where G6PD deficiency is common. Screening with direct glucose measurements, or genetically-informed HbA1c diagnostic thresholds in people with G6PD deficiency, may be required to avoid missed or delayed diagnoses.
6.	Dalton, A. S., et al. (författare) An updated radiocarbon-based ice margin chronology for the last deglaciation of the North American Ice Sheet Complex 2020 Ingår i: Quaternary Science Reviews. - : Elsevier BV. - 0277-3791. ; 234 Tidskriftsartikel (refereegranskat)abstract The North American Ice Sheet Complex (NAISC; consisting of the Laurentide, Cordilleran and Innuitian ice sheets) was the largest ice mass to repeatedly grow and decay in the Northern Hemisphere during the Quaternary. Understanding its pattern of retreat following the Last Glacial Maximum is critical for studying many facets of the Late Quaternary, including ice sheet behaviour, the evolution of Holocene landscapes, sea level, atmospheric circulation, and the peopling of the Americas. Currently, the most up-to-date and authoritative margin chronology for the entire ice sheet complex is featured in two publications (Geological Survey of Canada Open File 1574 [Dyke et al., 2003]; 'Quaternary Glaciations - Extent and Chronology, Part II' [Dyke, 2004]). These often-cited datasets track ice margin recession in 36 time slices spanning 18 ka to 1 ka (all ages in uncalibrated radiocarbon years) using a combination of geomorphology, stratigraphy and radiocarbon dating. However, by virtue of being over 15 years old, the ice margin chronology requires updating to reflect new work and important revisions. This paper updates the aforementioned 36 ice margin maps to reflect new data from regional studies. We also update the original radiocarbon dataset from the 2003/2004 papers with 1541 new ages to reflect work up to and including 2018. A major revision is made to the 18 ka ice margin, where Banks and Eglinton islands (once considered to be glacial refugia) are now shown to be fully glaciated. Our updated 18 ka ice sheet increased in areal extent from 17.81 to 18.37 million km(2), which is an increase of 3.1% in spatial coverage of the NAISC at that time. Elsewhere, we also summarize, region-by-region, significant changes to the deglaciation sequence. This paper integrates new information provided by regional experts and radiocarbon data into the deglaciation sequence while maintaining consistency with the original ice margin positions of Dyke et al. (2003) and Dyke (2004) where new information is lacking; this is a pragmatic solution to satisfy the needs of a Quaternary research community that requires up-to-date knowledge of the pattern of ice margin recession of what was once the world's largest ice mass. The 36 updated isochrones are available in PDF and shapefile format, together with a spreadsheet of the expanded radiocarbon dataset (n = 5195 ages) and estimates of uncertainty for each interval. (C) 2020 Elsevier Ltd. All rights reserved.
7.	Mocchiutti, E., et al. (författare) Cosmic–ray positron energy spectrum measured by PAMELA 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract The PAMELA satellite borne experiment is designed to study cosmic rays with great accuracy in a wide energy range. One of PAMELA’s main goal is the study of the antimatter component of cosmic rays. The experiment, housed on board the Russian satellite Resurs–DK1, was launched on June 15th 2006 and it is still taking data. In this work we present the measurement of galactic positron energy spectrum in the energy range between 500 MeV and few hundred GeV.
8.	Schmit, Stephanie L, et al. (författare) Novel Common Genetic Susceptibility Loci for Colorectal Cancer. 2019 Ingår i: Journal of the National Cancer Institute. - : Oxford University Press (OUP). - 0027-8874 .- 1460-2105. ; 111:2, s. 146-157 Tidskriftsartikel (refereegranskat)abstract Background: Previous genome-wide association studies (GWAS) have identified 42 loci (P < 5 × 10-8) associated with risk of colorectal cancer (CRC). Expanded consortium efforts facilitating the discovery of additional susceptibility loci may capture unexplained familial risk.Methods: We conducted a GWAS in European descent CRC cases and control subjects using a discovery-replication design, followed by examination of novel findings in a multiethnic sample (cumulative n = 163 315). In the discovery stage (36 948 case subjects/30 864 control subjects), we identified genetic variants with a minor allele frequency of 1% or greater associated with risk of CRC using logistic regression followed by a fixed-effects inverse variance weighted meta-analysis. All novel independent variants reaching genome-wide statistical significance (two-sided P < 5 × 10-8) were tested for replication in separate European ancestry samples (12 952 case subjects/48 383 control subjects). Next, we examined the generalizability of discovered variants in East Asians, African Americans, and Hispanics (12 085 case subjects/22 083 control subjects). Finally, we examined the contributions of novel risk variants to familial relative risk and examined the prediction capabilities of a polygenic risk score. All statistical tests were two-sided.Results: The discovery GWAS identified 11 variants associated with CRC at P < 5 × 10-8, of which nine (at 4q22.2/5p15.33/5p13.1/6p21.31/6p12.1/10q11.23/12q24.21/16q24.1/20q13.13) independently replicated at a P value of less than .05. Multiethnic follow-up supported the generalizability of discovery findings. These results demonstrated a 14.7% increase in familial relative risk explained by common risk alleles from 10.3% (95% confidence interval [CI] = 7.9% to 13.7%; known variants) to 11.9% (95% CI = 9.2% to 15.5%; known and novel variants). A polygenic risk score identified 4.3% of the population at an odds ratio for developing CRC of at least 2.0.Conclusions: This study provides insight into the architecture of common genetic variation contributing to CRC etiology and improves risk prediction for individualized screening.
9.	Adriani, O., et al. (författare) Antiprotons in primary cosmic radiation with PAMELA experiment 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract The latest measurements of antiprotons spectrum and antiproton-to-proton ratio in primary cosmic rays with PAMELA experiment are presented. They are in good agreement with model of secondary production of antiprotons in Galaxy, but they do not completely rule other sources at the high-energies.
10.	Carbone, R., et al. (författare) Pamela observation of the 2012 may 17 gle event 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract The PAMELA (Payload for Antimatter Matter Exploration and Light-nuclei Astrophysics) satellite-borne experiment has been collecting data in orbit since July 2006, providing accurate measurements of the energy spectra and composition of the cosmic radiation from a few hundred MeV/n up to hundred GeV/n. This wide interval of measured energies makes PAMELA a unique instrument for Solar Energetic Particle (SEP) observations. Not only does it span the energy range between the ground-based neutron monitor data and the observations of SEPs from space, but also PAMELA carries out the first direct measurements of the composition for the highest energy SEP events, including those causing Ground Level Enhancements (GLEs). PAMELA has registered many SEP events in solar cycle 24 including the 2012 May 17 GLE event (GLE 71), offering unique opportunities to address the question of high-energy SEP origin. Experimental performances and preliminary results on the 2012 May 17 events will be presented. We will discuss the derived particle injection time and compare with other time scales at the Sun including the flare and CME onset times.
11.	Formato, V., et al. (författare) Hydrogen and helium isotopes flux in cosmic rays with the PAMELA experiment 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract PAMELA is a satellite borne experiment designed to study with great accuracy cosmic rays of galactic, solar, and trapped nature, with particular focus on the antimatter component. The detector consists of a permanent magnet spectrometer core to provide rigidity and charge sign information, a Time-of-Flight system for velocity and charge information, a Silicon-Tungsten calorimeter and a Neutron detector for lepton/hadron identification. The beta and rigidity information allow to identify isotopes for Z = 1 and Z = 2 particles in the energy range 100 MeV/n to 1 GeV/n. In this work we will present the final PAMELA results on the H and He isotope fluxes measured during the 23rd solar minimum from 2006 to 2007. Such fluxes carry relevant information helpful in constraining parameters in galactic cosmic rays propagation models complementary to those obtained from other secondary to primary measurements such as the boron-to-carbon ratio.
12.	Munini, R., et al. (författare) Solar modulation of galactic cosmic rays electrons and positrons over the 23rd solar minimum with the pamela experiment 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract The satellite-borne PAMELA experiment has been continuously collecting data since 15th June 2006, when it was launched from the Baikonur cosmodrome to detect the charged component of cosmic rays over a wide energy range and with an unprecedented statistics. The apparatus design is particularly suited for particle and antiparticle identification. The satellite quasi-polar orbit, with an inclination of 70 degrees, allows particles to be measure down to 100 MeV/n. This makes the instrument suited for the investigation of phenomena related to galactic cosmic ray solar modulation in the inner heliosphere. Data for oppositely charged particles were collected from 2006 to 2009, during the A< 0 solar minimum of solar cycle 23. The time and rigidity dependence of galactic cosmic ray electron and positron fluxes were measured. These fluxes provide important information for the study of charge dependent solar modulation effects.
13.	Bien, Stephanie A., et al. (författare) Genetic variant predictors of gene expression provide new insight into risk of colorectal cancer 2019 Ingår i: Human Genetics. - : Springer. - 0340-6717 .- 1432-1203. ; 138:4, s. 307-326 Tidskriftsartikel (refereegranskat)abstract Genome-wide association studies have reported 56 independently associated colorectal cancer (CRC) risk variants, most of which are non-coding and believed to exert their effects by modulating gene expression. The computational method PrediXcan uses cis-regulatory variant predictors to impute expression and perform gene-level association tests in GWAS without directly measured transcriptomes. In this study, we used reference datasets from colon (n=169) and whole blood (n=922) transcriptomes to test CRC association with genetically determined expression levels in a genome-wide analysis of 12,186 cases and 14,718 controls. Three novel associations were discovered from colon transverse models at FDR0.2 and further evaluated in an independent replication including 32,825 cases and 39,933 controls. After adjusting for multiple comparisons, we found statistically significant associations using colon transcriptome models with TRIM4 (discovery P=2.2x10(-4), replication P=0.01), and PYGL (discovery P=2.3x10(-4), replication P=6.7x10(-4)). Interestingly, both genes encode proteins that influence redox homeostasis and are related to cellular metabolic reprogramming in tumors, implicating a novel CRC pathway linked to cell growth and proliferation. Defining CRC risk regions as one megabase up- and downstream of one of the 56 independent risk variants, we defined 44 non-overlapping CRC-risk regions. Among these risk regions, we identified genes associated with CRC (P<0.05) in 34/44 CRC-risk regions. Importantly, CRC association was found for two genes in the previously reported 2q25 locus, CXCR1 and CXCR2, which are potential cancer therapeutic targets. These findings provide strong candidate genes to prioritize for subsequent laboratory follow-up of GWAS loci. This study is the first to implement PrediXcan in a large colorectal cancer study and findings highlight the utility of integrating transcriptome data in GWAS for discovery of, and biological insight into, risk loci.
14.	McGovern, Dermot P B, et al. (författare) Genome-wide association identifies multiple ulcerative colitis susceptibility loci 2010 Ingår i: Nature Genetics. - : Springer Science and Business Media LLC. - 1061-4036 .- 1546-1718. ; 42:4, s. 332-337 Tidskriftsartikel (refereegranskat)abstract Ulcerative colitis is a chronic, relapsing inflammatory condition of the gastrointestinal tract with a complex genetic and environmental etiology. In an effort to identify genetic variation underlying ulcerative colitis risk, we present two distinct genome-wide association studies of ulcerative colitis and their joint analysis with a previously published scan, comprising, in aggregate, 2,693 individuals with ulcerative colitis and 6,791 control subjects. Fifty-nine SNPs from 14 independent loci attained an association significance of P < 10(-5). Seven of these loci exceeded genome-wide significance (P < 5 x 10(-8)). After testing an independent cohort of 2,009 cases of ulcerative colitis and 1,580 controls, we identified 13 loci that were significantly associated with ulcerative colitis (P < 5 x 10(-8)), including the immunoglobulin receptor gene FCGR2A, 5p15, 2p16 and ORMDL3 (orosomucoid1-like 3). We confirmed association with 14 previously identified ulcerative colitis susceptibility loci, and an analysis of acknowledged Crohn's disease loci showed that roughly half of the known Crohn's disease associations are shared with ulcerative colitis. These data implicate approximately 30 loci in ulcerative colitis, thereby providing insight into disease pathogenesis.
15.	McGovern, Dermot P. B., et al. (författare) Genome-wide association identifies multiple ulcerative colitis susceptibility loci (vol 42, pg 332, 2010) 2011 Ingår i: Nature Genetics. - : Springer Science and Business Media LLC. - 1061-4036 .- 1546-1718. ; 43:4, s. 388-388 Tidskriftsartikel (refereegranskat)
16.	Munini, R., et al. (författare) Evidence of Energy and Charge Sign Dependence of the Recovery Time for the 2006 December Forbush Event Measured by the PAMELA Experiment 2018 Ingår i: Astrophysical Journal. - : Institute of Physics Publishing (IOPP). - 0004-637X .- 1538-4357. ; 853:1 Tidskriftsartikel (refereegranskat)abstract New results on the short-term galactic cosmic-ray (GCR) intensity variation (Forbish decrease) in 2006 December measured by the PAMELA instrument are presented. Forbush decreases are sudden suppressions of the GCR intensities, which are associated with the passage of interplanetary transients such as shocks and interplanetary coronal mass ejections (ICMEs). Most of the past measurements of this phenomenon were carried out with groundbased detectors such as neutron monitors or muon telescopes. These techniques allow only the indirect detection of the overall GCR intensity over an integrated energy range. For the first time, thanks to the unique features of the PAMELA magnetic spectrometer, the Forbush decrease, commencing on 2006 December 14 and following a CME at the Sun on 2006 December 13, was studied in a wide rigidity range (0.4-20 GV) and for different species of GCRs detected directly in space. The daily averaged GCR proton intensity was used to investigate the rigidity dependence of the amplitude and the recovery time of the Forbush decrease. Additionally, for the first time, the temporal variations in the helium and electron intensities during a Forbush decrease were studied. Interestingly, the temporal evolutions of the helium and proton intensities during the Forbush decrease were found to be in good agreement, while the low rigidity electrons (<2 GV) displayed a faster recovery. This difference in the electron recovery is interpreted as a charge sign dependence introduced by drift motions experienced by the GCRs during their propagation through the heliosphere.
17.	Bourbon, Henri-Marc, et al. (författare) A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. 2004 Ingår i: Mol Cell. - : Elsevier BV. - 1097-2765. ; 14:5, s. 553-7 Tidskriftsartikel (refereegranskat)
18.	Casolino, M., et al. (författare) Two years of flight of the Pamela experiment : Results and perspectives 2009 Ingår i: Journal of the Physical Society of Japan. - 0031-9015 .- 1347-4073. ; 78:Suppl. A, s. 35-40 Tidskriftsartikel (refereegranskat)abstract PAMELA is a satellite borne experiment designed to study with great accuracy cosmic rays of galactic, solar, and trapped nature in a wide energy range (protons: 80 MeV-700 GeV, electrons 50 MeV-400 GeV). Main objective is the study of the antimatter component: antiprotons (80 MeV-190 GeV), positrons (50 MeV-270 GeV) and search for antinuclei with a precision of the order of 10~8). The experiment, housed on board the Russian Resurs-DKl satellite, was launched on June, 15th 2006 in a 350 x 600 km orbit with an inclination of 70 degrees. In this work we describe the scientific objectives and the performance of PAMELA in its first two years of operation. Data on protons of trapped, secondary and galactic nature - as well as measurements of the December 13th 2006 Solar Particle Event - are also provided.
19.	Lange, Leslie A, et al. (författare) Whole-Exome Sequencing Identifies Rare and Low-Frequency Coding Variants Associated with LDL Cholesterol. 2014 Ingår i: American Journal of Human Genetics. - : Elsevier BV. - 0002-9297. ; 94:2, s. 233-245 Tidskriftsartikel (refereegranskat)abstract Elevated low-density lipoprotein cholesterol (LDL-C) is a treatable, heritable risk factor for cardiovascular disease. Genome-wide association studies (GWASs) have identified 157 variants associated with lipid levels but are not well suited to assess the impact of rare and low-frequency variants. To determine whether rare or low-frequency coding variants are associated with LDL-C, we exome sequenced 2,005 individuals, including 554 individuals selected for extreme LDL-C (>98(th) or <2(nd) percentile). Follow-up analyses included sequencing of 1,302 additional individuals and genotype-based analysis of 52,221 individuals. We observed significant evidence of association between LDL-C and the burden of rare or low-frequency variants in PNPLA5, encoding a phospholipase-domain-containing protein, and both known and previously unidentified variants in PCSK9, LDLR and APOB, three known lipid-related genes. The effect sizes for the burden of rare variants for each associated gene were substantially higher than those observed for individual SNPs identified from GWASs. We replicated the PNPLA5 signal in an independent large-scale sequencing study of 2,084 individuals. In conclusion, this large whole-exome-sequencing study for LDL-C identified a gene not known to be implicated in LDL-C and provides unique insight into the design and analysis of similar experiments.
20.	Lewin, Harris A., et al. (författare) The Earth BioGenome Project 2020 : Starting the clock 2022 Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences (PNAS). - 0027-8424 .- 1091-6490. ; 119:4 Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
21.	Adriani, O., et al. (författare) A statistical procedure for the identification of positrons in the PAMELA experiment 2010 Ingår i: Astroparticle physics. - : Elsevier BV. - 0927-6505 .- 1873-2852. ; 34:1, s. 1-11 Tidskriftsartikel (refereegranskat)abstract The PAMELA satellite experiment has measured the cosmic-ray positron fraction between 1.5 GeV and 100 GeV. The need to reliably discriminate between the positron signal and proton background has required the development of an ad hoc analysis procedure. In this paper, a method for positron identification is described and its stability and capability to yield a correct background estimate is shown. The analysis includes new experimental data, the application of three different fitting techniques for the background sample and an estimate of systematic uncertainties due to possible inaccuracies in the background selection. The new experimental results confirm both solar modulation effects on cosmic-rays with low rigidities and an anomalous positron abundance above 10 GeV. (c) 2010 Elsevier B.V. All rights reserved.
22.	Adriani, O., et al. (författare) Positrons and electrons in primary cosmic rays as measured in the PAMELA experiment 2009 Ingår i: Bulletin of the Russian Academy of Sciences: Physics. - 1062-8738. ; 73:5, s. 568-570 Tidskriftsartikel (refereegranskat)abstract The PAMELA experiment is being carried out on board the Russian satellite Resurs DK1 placed in the near-earth near-polar orbit on June 15, 2006. The apparatus comprising a silicon-strip magnetic spectrometer and an electromagnetic calorimeter allows measurement of electron and positron fluxes in cosmic rays in a wide energy interval from ∼100 MeV to hundreds of GeV. The high-energy electron and positron separation technique is discussed and the data on positron-to-electron ratio in primary cosmic rays up to E ≃ 10 GeV from the 2006 - 2007 measurements are reported in this work.
23.	Adriani, O., et al. (författare) Secondary electron and positron fluxes in the near-Earth space observed in the ARINA and PAMELA experiments 2009 Ingår i: Bulletin of the Russian Academy of Sciences: Physics. - 1062-8738. ; 73:3, s. 364-366 Tidskriftsartikel (refereegranskat)abstract Secondary electron and positron fluxes in the energy range from 3 MeV to 7 GeV were measured with the ARINA and PAMELA spectrometers onboard the Resurs-DK satellite launched on June 15, 2006 into an elliptical orbit with an inclination of 70.4° and an altitude of 350-600 km. It is shown that positrons dominate over electrons by a factor of up to 4-5 in the geomagnetic equator region (L < 1.2 and B > 0.25).
24.	Adriani, O., et al. (författare) The PAMELA Mission : Heralding a new era in precision cosmic ray physics 2014 Ingår i: Physics reports. - : Elsevier BV. - 0370-1573 .- 1873-6270. ; 544:4, s. 323-370 Forskningsöversikt (refereegranskat)abstract On the 15th of June 2006, the PAMELA (Payload for Antimatter Matter Exploration and Light-nuclei Astrophysics) satellite-borne experiment was launched onboard the Russian Resurs-DK1 satellite by a Soyuz rocket from the Baikonur space centre. The satellite was placed in a quasi-polar 70 degrees inclination orbit at an altitude varying between 350 km and 600 km. New results on the antiparticle component of the cosmic radiation were obtained. The positron energy spectrum and positron fraction were measured from 400 MeV up to 200 GeV revealing a positron excess over the predictions of commonly used propagation models. This can be interpreted either as evidence that the propagation models should be revised or in terms of dark matter annihilation or a pulsar contribution. The antiproton spectrum was measured over the energy range from 60 MeV to 350 GeV. The antiproton spectrum is consistent with secondary production and significantly constrains dark matter models. The energy spectra of protons and helium nuclei were measured up to 1.2 TV. The spectral shapes of these two species are different and cannot be described well by a single power law. For the First time the electron spectrum was measured up to 600 GeV complementing the information obtained from the positron data. Nuclear and isotopic composition was obtained with unprecedented precision. The variation of the low energy proton, electron and positron energy spectra was measured from July 2006 until December 2009 accurately sampling the unusual conditions of the most recent solar minimum activity period (2006-2009). Low energy particle spectra were accurately measured also for various solar events that occurred during the PAMELA mission. The Earth's magnetosphere was studied measuring the particle radiation in different regions of the magnetosphere. Energy spectra and composition of sub-cutoff and trapped particles were obtained. For the first time a belt of trapped antiprotons was detected in the South Atlantic Anomaly region. The flux was found to exceed that for galactic cosmic-ray antiprotons by three order of magnitude.
25.	Adriani, O., et al. (författare) The PAMELA space mission 2008 Ingår i: Astroparticle, Part. Space Phys., Detect. Med. Phys. Appl. - Proc. Conf.. - : WORLD SCIENTIFIC. - 9812819088 - 9789812819086 ; , s. 858-864 Konferensbidrag (refereegranskat)abstract The PAMELA (a Payload for Antimatter-Matter Exploration and Light-nuclei Astrophysics) experiment, is a satellite-borne particle spectrometer. It was launched on 15th June 2006 from the Baikonur cosmodrome in Kazakhstan, is installed into the Russian Resurs-DK1 satellite. PAMELA is composed of a time-of-flight system, a magnetic spectrometer, a silicon-tungsten electromagnetic calorimeter, an anticoincidence system, a shower tail catcher scintillator and a neutron detector. Among the PAMELA major objectives are the study of charged particles in the cosmic radiation, the investigation of the nature of dark matter, by mean of the measure of the cosmic-ray antiproton and positron spectra over the largest energy range ever achieved. PAMELA has been in a nearly continuous data taking mode since llth July 2006. The status of the apparatus and performances will be presented.
26.	Bazilevskaya, G. A., et al. (författare) Solar proton events at the end of the 23rd and start of the 24th solar cycle recorded in the PAMELA experiment 2013 Ingår i: Bulletin of the Russian Academy of Sciences: Physics. - 1062-8738. ; 77:5, s. 493-496 Tidskriftsartikel (refereegranskat)abstract The PAMELA magnetic spectrometer was launched into a near-Earth orbit on board the Resurs-DK1 satellite in June 2006; in December 2006, it recorded the last strong solar high-energy particle event of the 23rd solar cycle. A deficit was thereafter observed in solar energetic particle events because of the lengthy solar activity minimum and the weak evolution of the next (24th) solar cycle. As a result, only a few solar events involving protons with energies of more than 100 MeV were recorded between 2010 and 1012. This work presents the preliminary results from measurements of charged particle fluxes in these events, recorded by the Pamela spectrometer.
27.	Boezio, M., et al. (författare) The first year in orbit of the pamela experiment 2007 Ingår i: Proceedings of the 30th International Cosmic Ray Conference, ICRC 2007. - : Universidad Nacional Autonoma de Mexico. ; , s. 99-102 Konferensbidrag (refereegranskat)abstract On the 15th of June 2006, the PAMELA experiment mounted on the Resurs DK1 satellite, was launched from the Baikonur cosmodrome and it has been collecting data since July 2006. PAMELA is a satellite-borne apparatus designed to study charged particles in the cosmic radiation, to investigate the nature of dark matter, measuring the cosmic-ray antiproton and positron spectra over the largest energy range ever achieved, and to search for antinuclei with unprecedented sensitivity. The PAMELA apparatus comprises a time-of-flight system, a magnetic spectrometer, a silicon-tungsten electromagnetic calorimeter, an anticoincidence system, a shower tail catcher scintillator and a neutron detector. We will present the status of the apparatus after one year in orbit. Furthermore, we will discuss the PAMELA in-flight performances.
28.	Boezio, M., et al. (författare) The PAMELA space experiment : First year of operation 2008 Ingår i: Journal of Physics, Conference Series. - : Institute of Physics Publishing (IOPP). - 1742-6588 .- 1742-6596. ; 110:6 Tidskriftsartikel (refereegranskat)abstract On the 15th of June 2006 the PAMELA experiment, mounted on the Resurs DK1 satellite, was launched from the Baikonur cosmodrome and it has been collecting data since July 2006. PAMELA is a satellite-borne apparatus designed to study charged particles in the cosmic radiation, to investigate the nature of dark matter, measuring the cosmic-ray antiproton and positron spectra over the largest energy range ever achieved, and to search for antinuclei with unprecedented sensitivity. The apparatus comprises a time-of-flight system, a silicon-microstrip magnetic spectrometer, a silicon-tungsten electromagnetic calorimeter, an anticoincidence system, a shower tail catcher scintillator and a neutron detector. The combination of these devices allows charged particle identification over a wide energy range. © 2008 IOP Publishing Ltd.
29.	Bonvicini, V., et al. (författare) Performance of the PAMELA Si-W imaging calorimeter in space 2009 Ingår i: Journal of Physics, Conference Series. - : IOP Publishing. - 1742-6588 .- 1742-6596. ; 160, s. 012039- Tidskriftsartikel (refereegranskat)abstract The Payload for Antimatter-Matter Exploration and Light Nuclei Astrophysics (PAMELA), primarily designed to directly measure antiparticles (antiprotons and positrons) in the cosmic radiation, was launched successfully on June 15th, 2006, and, since then, it is in continuous data taking. The calorimeter of the PAMELA apparatus has been designed to identify antiprotons from an electron background and positrons from a background of protons with high efficiency and rejection power. It is a sampling silicon-tungsten imaging calorimeter, which comprises 44 single-sided silicon sensor planes (380 μm thick) interleaved with 22 plates of tungsten absorber (0.74 X0 each). It is the first silicon-tungsten calorimeter to be launched in space. In this work we present the in-orbit performance of the calorimeter, including the measured identification capabilities. The calorimeter provides a proton rejection factor of ∼105 while keeping a high efficiency in selecting electrons and positrons, thus fulfilling the identification power needed to reach the primary scientific objectives of PAMELA. We show also that, after almost two years of operation in space, the calorimeter is still performing nominally.
30.	Bruno, A., et al. (författare) First detection of geomagnetically trapped antiprotons by the PAMELA experiment 2011 Ingår i: Proceedings of the 32nd International Cosmic Ray Conference, ICRC 2011. - : Institute of High Energy Physics. ; , s. 86-89 Konferensbidrag (refereegranskat)abstract We present the measurement of geomagnetically trapped antiprotons in the South Atlantic Anomaly performed by the PAMELA satellite-bourne experiment. The existence of an antiproton radiation belt, predicted by several models as the product of cosmic ray interactions with the residual terrestrial atmosphere, is evidenced for the first time. PAMELA measured the antiproton spectrum in the kinetic energy range between 60 and 750 MeV, reporting a trapped antiproton flux which exceeds by about 3 orders of magnitude the interplanetary cosmic ray antiproton flux. An estimation of the mean under-cutoff antiproton flux outside radiation belts has been also provided.
31.	Bruno, A., et al. (författare) Precise cosmic rays measurements with PAMELA 2013 Ingår i: Acta Polytechnica. - 1210-2709. ; 53:Suppl.1, s. 712-717 Tidskriftsartikel (refereegranskat)abstract The PAMELA experiment was launched on board the Resurs-DK1 satellite on June 15th 2006. The apparatus was designed to conduct precision studies of charged cosmic radiation over a wide energy range, from tens of MeV up to several hundred GeV, with unprecedented statistics. In five years of continuous data taking in space, PAMELA accurately measured the energy spectra of cosmic ray antiprotons and positrons, as well as protons, electrons and light nuclei, sometimes providing data in unexplored energetic regions. These important results have shed new light in several astrophysical fields like: an indirect search for Dark Matter, a search for cosmological antimatter (anti-Helium), and the validation of acceleration, transport and secondary production models of cosmic rays in the Galaxy. Some of the most important items of Solar and Magnetospheric physics were also investigated. Here we present the most recent results obtained by the PAMELA experiment.
32.	Bruno, A., et al. (författare) Trapped protons in SAA measured by the PAMELA experiment 2011 Ingår i: Proceedings of the 32nd International Cosmic Ray Conference, ICRC 2011. - : Institute of High Energy Physics. ; , s. 82-85 Konferensbidrag (refereegranskat)abstract An accurate measurement of under cutoff proton fluxes in the energy range 60 MeV ÷ 3 GeV has been performed by the PAMELA satellite-borne experiment. Thanks to the high identification performances and to the semipolar and elliptic satellite orbit, PAMELA is able to provide information about spectra and composition of particles in different regions of the magnetosphere. Here we present the measurement of the geomagnetically trapped protons from the inner radiation belt (SAA). The fluxes as a function of equatorial pitch angle and McIlwain L-shell are reported.
33.	Casolino, M., et al. (författare) Cosmic ray measurements with Pamela experiment 2009 Konferensbidrag (refereegranskat)abstract PAMELA is a satellite borne experiment designed to study with great accuracy cosmic rays of galactic, solar, and trapped nature hi a wide energy range (protons: 80 MeV-700 GeV, electrons 50 MeV-400 GeV). Main objective is the study of the antimatter component: antiprotons (80 MeV-190 GeV), positrons (50 MeV-270 GeV) and search for antinuclei with a precision of the order of 10(-8)). The experiment, housed on board the Russian Resurs-DK1 satellite, was launched on June, 15(th) 2006 in a 350 X 600 km orbit with an inclination of 70 degrees. In this work we describe the scientific objectives awl the performance of PAMELA in its first two years of operation. Data oil protons of trapped, secondary and galactic nature - as well as measurements of the December 13(th) 2006 Solar Particle Event - are also provided.
34.	Casolino, M., et al. (författare) Launch of the space experiment PAMELA 2008 Ingår i: Advances in Space Research. - : Elsevier. - 0273-1177 .- 1879-1948. ; 42:3, s. 455-466 Tidskriftsartikel (refereegranskat)abstract PAMELA is a satellite borne experiment designed to study with great accuracy cosmic rays of galactic, solar, and trapped nature in a wide energy range (protons 80 MeV-700 GeV, electrons 50 MeV-400 GeV). Main objective is the study of the antimatter component: antiprotons (80 MeV-190 GeV), positrons (50 MeV-270 GeV) and search for antimatter with a precision of the order of 10-8. The experiment, housed on board the Russian Resurs-DK I satellite, was launched on June 15th, 2006 in a 350 x 600 km orbit with all inclination of 70'. The detector is composed of a series of scintillator counters arranged at the extremities of a permanent magnet spectrometer to provide charge, time-of-flight, and rigidity information. Lepton/hadron identification is performed by a silicon-tungsten calorimeter and a neutron detector placed at the bottom of the device. An anticounter system is used offline to reject false triggers coming from the satellite. In self-trigger mode the calorimeter, the neutron detector, and a shower tail catcher are capable of an independent measure of the lepton component up to 2 TeV. In this work we describe the experiment, its scientific objectives, and the performance in the first months after launch.
35.	Casolino, M., et al. (författare) Magnetospheric and solar physics observations with the PAMELA experiment 2008 Ingår i: Nuclear Instruments and Methods in Physics Research Section A. - : Elsevier BV. - 0168-9002 .- 1872-9576. ; 588:1-2, s. 243-246 Tidskriftsartikel (refereegranskat)abstract PAMELA is a satellite-borne experiment designed to make long duration measurements of the cosmic radiation in Low Earth Orbit. It is devoted to the detection of the cosmic-ray spectra in the 100 MeV-300 GeV range with primary scientific goal the measurement of antiproton and positron spectra over the largest energy range ever achieved. Other tasks include the search for antinuclei with unprecedented sensitivity and the measurement of the light nuclear component of cosmic rays. In addition, PAMELA can investigate phenomena connected with solar and Earth physics. The apparatus consists of: a Time of Flight system, a magnetic spectrometer, an electromagnetic imaging calorimeter, a shower tail catcher scintillator, a neutron detector and an anticoincidence system. In this work we present some measurements of galactic, secondary and trapped particles performed in the first months of operation.
36.	Galper, A. M., et al. (författare) International Russian-Italian mission "Rim-Pamela 2009 Ingår i: Proceedings of the 13th Lomonosov Conference on Elementary Particle Physics. - : WORLD SCIENTIFIC. - 9812837582 - 9789812837585 ; , s. 199-206 Konferensbidrag (refereegranskat)abstract The successful launch of spacecraft "RESURS DK" 1 with precision magnetic spectrometer "PAMELA" onboard was executed at Baikonur cosmodrome 15 June 2006. The primary phase of realization of International Russian-Italian Project "RIM-PAMELA" with German and Swedish scientists' participation has begun since the launch of instrument "PAMELA" that has mainly been directed to investigate the fluxes of galactic cosmic rays. This report contains the main scientific Project's tasks and the conditions of science program's implementation after one year since exploration has commenced.
37.	Giaccari, U., et al. (författare) Anisotropy studies in the cosmic ray proton flux with the PAMELA experiment 2013 Ingår i: Proceedings of the 9th workshop on Science with the New Generation of High Energy Gamma-ray Experiments: From high energy gamma sources to cosmic rays, one century after their discovery. - : Elsevier. ; , s. 123-128 Konferensbidrag (refereegranskat)abstract Using data taken by the Pamela experiment during 5 years of operation we studied the anisotropy in the arrival direction distribution of cosmic ray protons with rigidity above 40 GV. In this survey we used two different and independent techniques to investigate the large and medium anisotropy patterns in the proton spectrum. With both methods the observed distribution of arrival directions is consistent with the isotropic expectation and no significant evidence of strong anisotropies has been observed.
38.	Lagou, Vasiliki, et al. (författare) Sex-dimorphic genetic effects and novel loci for fasting glucose and insulin variability 2021 Ingår i: Nature Communications. - : Nature Publishing Group. - 2041-1723. ; 12:1 Tidskriftsartikel (refereegranskat)abstract Differences between sexes contribute to variation in the levels of fasting glucose and insulin. Epidemiological studies established a higher prevalence of impaired fasting glucose in men and impaired glucose tolerance in women, however, the genetic component underlying this phenomenon is not established. We assess sex-dimorphic (73,089/50,404 women and 67,506/47,806 men) and sex-combined (151,188/105,056 individuals) fasting glucose/fasting insulin genetic effects via genome-wide association study meta-analyses in individuals of European descent without diabetes. Here we report sex dimorphism in allelic effects on fasting insulin at IRS1 and ZNF12 loci, the latter showing higher RNA expression in whole blood in women compared to men. We also observe sex-homogeneous effects on fasting glucose at seven novel loci. Fasting insulin in women shows stronger genetic correlations than in men with waist-to-hip ratio and anorexia nervosa. Furthermore, waist-to-hip ratio is causally related to insulin resistance in women, but not in men. These results position dissection of metabolic and glycemic health sex dimorphism as a steppingstone for understanding differences in genetic effects between women and men in related phenotypes.
39.	Mayorov, A. G., et al. (författare) Antiprotons of galactic cosmic radiation in the PAMELA experiment 2013 Ingår i: Bulletin of the Russian Academy of Sciences: Physics. - 1062-8738. ; 77:5, s. 602-605 Tidskriftsartikel (refereegranskat)abstract A method for antiproton selection against a background of electrons, based on a mathematical model of data classification using variations in interparticle interaction in a calorimeter, and a method for excluding events accompanied by scattering in the inner detectors of a tracking system (which result in errors in the measured trajectory's curvature and charge sign) from analysis are discussed in this paper. Antiproton spectra and antiproton/proton flux ratio at energies of 0.06 to 350 GeV with statistics of events surpassing those in [1] are obtained. The results can be used to create models for the generation and distribution of particles in the Galaxy, and for searching and studying the nature of hypothetical dark matter particles.
40.	Mikhailov, V. V., et al. (författare) Anisotropy analysis of positron data with the PAMELA experiment 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract The PAMELA experiment is carried out on board of satellite the Resurs DK1 since 2006 for precision study of cosmic ray antiparticles. The instrument is equipped with magnetic spectrometer, silicon-tungsten imaging electromagnetic calorimeter, neutron detector which give possibility to separate electron and positron over wide energy range up to hundreds GeVs and to measure their incoming direction with accuracy about 2 degree. For each detected particle a space arriving direction was reconstructed using trajectory inside the instrument and the satellite position on the orbit. Backtracking in geomagnetic field was done to obtain initial spatial distribution of particles outside of the Earth magnetosphere. This paper discuss a result of search a possible local sources by anisotropy analysis of positron data.
41.	Mikhailov, V. V., et al. (författare) Method of electrons and positrons separations by bremsstrahlung in the PAMELA experiment 2013 Ingår i: Proceedings of the 33rd International Cosmic Rays Conference, ICRC 2013. - : Sociedade Brasileira de Fisica. - 9788589064293 Konferensbidrag (refereegranskat)abstract Imaging calorimeter of the PAMELA instrument on board the Resurs DK satellite has high spatial resolution and allows to measure separately electromagnetic showers from electrons and positrons and their bremsstahlung produced in ToF detectors of the instrument. Measuring events with two showers provides proton rejection coefficient more than 104 at energy between 0.5 and 3 GeV. Results of positrons fractions obtained by this method are in agreement with previously published data of the PAMELA experiment at low energy. It confirms in independent way strong positron modulation during period of negative polarity of the Sun magnetic field.
42.	Papini, P., et al. (författare) In-flight performances of the PAMELA satellite experiment 2008 Ingår i: Nuclear Instruments and Methods in Physics Research Section A. - : Elsevier BV. - 0168-9002 .- 1872-9576. ; 588:1-2, s. 259-266 Tidskriftsartikel (refereegranskat)abstract PAMELA is a satcllite-borne experiment designed to study with great accuracy charged particles in the cosmic radiation with a particular focus on antiparticles. The experiment, housed on board the Russian Resurs-DK1 satellite, was launched on June 15, 2006 in a 350 x 600 km orbit with an inclination of 70 degrees. The apparatus comprises a time-of-flight system, a silicon-microstrip magnetic spectrometer, a silicon-tungsten electromagnetic calorimeter, an anticoincidence system, a shower tail catcher scintillator and a neutron detector. The combination of these devices allows charged particle identification over a wide energy range. In this work, the detector design is reviewed and the in-orbit performances in the first months after the launch are presented.
43.	Pearce, Mark, et al. (författare) PAMELA : a payload for antimatter matter exploration and light-nuclei astrophysics - status and first results 2007 Ingår i: 2007 IEEE NUCLEAR SCIENCE SYMPOSIUM CONFERENCE RECORD, VOLS 1-11. - 9781424409228 ; , s. 42-47 Konferensbidrag (refereegranskat)abstract PAMELA is a satellite-borne experiment designed for precision studies of the charged cosmic radiation. The primary scientific goal is the study of the antimatter component of the cosmic radiation (antiprotons, 80 MeV - 190 GeV; and positrons, 50 MeV - 270 GeV) in order to search for evidence of dark matter particle annihilations. PAMELA will also search for primordial antinuclei (in particular, anti-helium), and test cosmic-ray propagation models through precise measurements of the antiparticle energy spectrum and studies of light nuclei and their isotopes. Concomitant goals include a study of solar physics and solar modulation during the 24th solar minimum by investigating low energy particles in the cosmic radiation; and a reconstruction of the cosmic ray electron energy spectrum up to several TeV thereby allowing a possible contribution from local sources to be studied. PAMELA is housed on-board the Russian Resurs-DK1 satellite, which was launched on June 15th 2006 in an elliptical (350-600 km altitude) orbit with an inclination of 70 degrees. PAMELA consists of a permanent magnet spectrometer, to provide rigidity and charge sign information; a Time-of-Flight and trigger system, for velocity and charge determination; a silicon-tungsten calorimeter, for lepton/hadron discrimination; and a neutron detector. An anticoincidence system is used offline to reject false triggers. In this article the PAMELA experiment and its status are reviewed. A preliminary discussion of data recorded in-orbit is also presented.
44.	Ricciarini, S. B., et al. (författare) PAMELA mission : Heralding a new era in cosmic ray physics 2014 Ingår i: EPJ Web of Conferences. - : EDP Sciences. - 2100-014X. Konferensbidrag (refereegranskat)abstract After seven years of data taking in space, the experiment PAMELA is showing very interesting features in cosmic rays, namely in the fluxes of protons, helium, electrons, that might change our basic vision of the mechanisms of production, acceleration and propagation of cosmic rays in the galaxy. In addition, PAMELA measurements of cosmic antiproton and positron fluxes are setting strong constraints to the nature of Dark Matter. The continuous particle detection is allowing a constant monitoring of the solar activity and detailed study of the solar modulation for a long period, giving important improvements to the comprehension of the heliosphere mechanisms. PAMELA is also measuring the radiation environment around the Earth, and has recently discovered an antiproton radiation belt.
45.	Roy, Sushmita, et al. (författare) Identification of functional elements and regulatory circuits by Drosophila modENCODE. 2010 Ingår i: Science (New York, N.Y.). - : American Association for the Advancement of Science (AAAS). - 1095-9203 .- 0036-8075. ; 330:6012, s. 1787-1797 Tidskriftsartikel (refereegranskat)abstract To gain insight into how genomic information is translated into cellular and developmental programs, the Drosophila model organism Encyclopedia of DNA Elements (modENCODE) project is comprehensively mapping transcripts, histone modifications, chromosomal proteins, transcription factors, replication proteins and intermediates, and nucleosome properties across a developmental time course and in multiple cell lines. We have generated more than 700 data sets and discovered protein-coding, noncoding, RNA regulatory, replication, and chromatin elements, more than tripling the annotated portion of the Drosophila genome. Correlated activity patterns of these elements reveal a functional regulatory network, which predicts putative new functions for genes, reveals stage- and tissue-specific regulators, and enables gene-expression prediction. Our results provide a foundation for directed experimental and computational studies in Drosophila and related species and also a model for systematic data integration toward comprehensive genomic and functional annotation.
46.	Scott, Robert A, et al. (författare) No interactions between previously associated 2-hour glucose gene variants and physical activity or BMI on 2-hour glucose levels 2012 Ingår i: Diabetes. - Alexandria, VA : American Diabetes Association. - 0012-1797 .- 1939-327X. ; 61:5, s. 1291-1296 Tidskriftsartikel (refereegranskat)abstract Gene-lifestyle interactions have been suggested to contribute to the development of type 2 diabetes. Glucose levels 2 h after a standard 75-g glucose challenge are used to diagnose diabetes and are associated with both genetic and lifestyle factors. However, whether these factors interact to determine 2-h glucose levels is unknown. We meta-analyzed single nucleotide polymorphism (SNP) × BMI and SNP × physical activity (PA) interaction regression models for five SNPs previously associated with 2-h glucose levels from up to 22 studies comprising 54,884 individuals without diabetes. PA levels were dichotomized, with individuals below the first quintile classified as inactive (20%) and the remainder as active (80%). BMI was considered a continuous trait. Inactive individuals had higher 2-h glucose levels than active individuals (β = 0.22 mmol/L [95% CI 0.13-0.31], P = 1.63 × 10(-6)). All SNPs were associated with 2-h glucose (β = 0.06-0.12 mmol/allele, P ≤ 1.53 × 10(-7)), but no significant interactions were found with PA (P > 0.18) or BMI (P ≥ 0.04). In this large study of gene-lifestyle interaction, we observed no interactions between genetic and lifestyle factors, both of which were associated with 2-h glucose. It is perhaps unlikely that top loci from genome-wide association studies will exhibit strong subgroup-specific effects, and may not, therefore, make the best candidates for the study of interactions.
47.	Adriani, O., et al. (författare) An anomalous positron abundance in cosmic rays with energies 1.5-100 GeV 2009 Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 458:7238, s. 607-609 Tidskriftsartikel (refereegranskat)abstract Antiparticles account for a small fraction of cosmic rays and are known to be produced in interactions between cosmic-ray nuclei and atoms in the interstellar medium(1), which is referred to as a 'secondary source'. Positrons might also originate in objects such as pulsars(2) and microquasars(3) or through dark matter annihilation(4), which would be 'primary sources'. Previous statistically limited measurements(5-7) of the ratio of positron and electron fluxes have been interpreted as evidence for a primary source for the positrons, as has an increase in the total electron+positron flux at energies between 300 and 600 GeV (ref. 8). Here we report a measurement of the positron fraction in the energy range 1.5-100 GeV. We find that the positron fraction increases sharply overmuch of that range, in a way that appears to be completely inconsistent with secondary sources. We therefore conclude that a primary source, be it an astrophysical object or dark matter annihilation, is necessary.
48.	Adriani, O., et al. (författare) Cosmic-Ray Electron Flux Measured by the PAMELA Experiment between 1 and 625 GeV 2011 Ingår i: Physical Review Letters. - 0031-9007 .- 1079-7114. ; 106:20, s. 201101- Tidskriftsartikel (refereegranskat)abstract Precision measurements of the electron component in the cosmic radiation provide important information about the origin and propagation of cosmic rays in the Galaxy. Here we present new results regarding negatively charged electrons between 1 and 625 GeV performed by the satellite-borne experiment PAMELA. This is the first time that cosmic-ray e(-) have been identified above 50 GeV. The electron spectrum can be described with a single power-law energy dependence with spectral index -3.18 +/- 0.05 above the energy region influenced by the solar wind (> 30 GeV). No significant spectral features are observed and the data can be interpreted in terms of conventional diffusive propagation models. However, the data are also consistent with models including new cosmic-ray sources that could explain the rise in the positron fraction.
49.	Adriani, O., et al. (författare) Cosmic-Ray Positron Energy Spectrum Measured by PAMELA 2013 Ingår i: Physical Review Letters. - 0031-9007 .- 1079-7114. ; 111:8, s. 081102- Tidskriftsartikel (refereegranskat)abstract Precision measurements of the positron component in the cosmic radiation provide important information about the propagation of cosmic rays and the nature of particle sources in our Galaxy. The satellite-borne experiment PAMELA has been used to make a new measurement of the cosmic-ray positron flux and fraction that extends previously published measurements up to 300 GeV in kinetic energy. The combined measurements of the cosmic-ray positron energy spectrum and fraction provide a unique tool to constrain interpretation models. During the recent solar minimum activity period from July 2006 to December 2009, approximately 24 500 positrons were observed. The results cannot be easily reconciled with purely secondary production, and additional sources of either astrophysical or exotic origin may be required.
50.	Adriani, O., et al. (författare) Latest results from the Pamela experiment 2009 Ingår i: Proceedings of Science. ; , s. 1-6 Konferensbidrag (refereegranskat)abstract In this paper we present the latest results of the Pamela satellite experiment, focusing in particular on the p̄/p and the e +/(e+ +e-) ratios.

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