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  • Vieira-Silva, S., et al. (författare)
  • Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
  • 2020
  • Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 581:7808, s. 310-315
  • Tidskriftsartikel (refereegranskat)abstract
    • Microbiome community typing analyses have recently identified the Bacteroides2 (Bact2) enterotype, an intestinal microbiota configuration that is associated with systemic inflammation and has a high prevalence in loose stools in humans1,2. Bact2 is characterized by a high proportion of Bacteroides, a low proportion of Faecalibacterium and low microbial cell densities1,2, and its prevalence varies from 13% in a general population cohort to as high as 78% in patients with inflammatory bowel disease2. Reported changes in stool consistency3 and inflammation status4 during the progression towards obesity and metabolic comorbidities led us to propose that these developments might similarly correlate with an increased prevalence of the potentially dysbiotic Bact2 enterotype. Here, by exploring obesity-associated microbiota alterations in the quantitative faecal metagenomes of the cross-sectional MetaCardis Body Mass Index Spectrum cohort (n=888), we identify statin therapy as a key covariate of microbiome diversification. By focusing on a subcohort of participants that are not medicated with statins, we find that the prevalence of Bact2 correlates with body mass index, increasing from 3.90% in lean or overweight participants to 17.73% in obese participants. Systemic inflammation levels in Bact2-enterotyped individuals are higher than predicted on the basis of their obesity status, indicative of Bact2 as a dysbiotic microbiome constellation. We also observe that obesity-associated microbiota dysbiosis is negatively associated with statin treatment, resulting in a lower Bact2 prevalence of 5.88% in statin-medicated obese participants. This finding is validated in both the accompanying MetaCardis cardiovascular disease dataset (n = 282) and the independent Flemish Gut Flora Project population cohort (n=2,345). The potential benefits of statins in this context will require further evaluation in a prospective clinical trial to ascertain whether the effect is reproducible in a randomized population and before considering their application as microbiota-modulating therapeutics. © 2020, The Author(s), under exclusive licence to Springer Nature Limited.
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  • Armengaud, J., et al. (författare)
  • The Importance Of Naturally Attenuated Sars-Cov-2 In The Fight Against Covid-19
  • 2020
  • Ingår i: Environmental Microbiology. - : Wiley. - 1462-2912 .- 1462-2920. ; 22:6, s. 1997-2000
  • Tidskriftsartikel (refereegranskat)abstract
    • The current SARS-CoV-2 pandemic is wreaking havoc throughout the world and has rapidly become a global health emergency. A central question concerning COVID-19 is why some individuals become sick and others not. Many have pointed already at variation in risk factors between individuals. However, the variable outcome of SARS-CoV-2 infections may, at least in part, be due also to differences between the viral subspecies with which individuals are infected. A more pertinent question is how we are to overcome the current pandemic. A vaccine against SARS-CoV-2 would offer significant relief, although vaccine developers have warned that design, testing, and production of vaccines may take a year if not longer. Vaccines are based on a handful of different designs (1), but the earliest vaccines were based on live, attenuated virus. As has been the case for other viruses during earlier pandemics, SARS-CoV-2 will mutate and may naturally attenuate over time (2). What makes the current pandemic unique is that, thanks to state-of-the-art nucleic acid sequencing technologies, we can follow in detail how SARS-CoV-2 evolves while it spreads. We argue that knowledge of naturally emerging attenuated SARS-CoV-2 variants across the globe should be of key interest in our fight against the pandemic. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.
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  • Bessell, Michael S., et al. (författare)
  • Nucleosynthesis in a Primordial Supernova : Carbon and Oxygen Abundances in SMSS J031300.36-670839.3
  • 2015
  • Ingår i: Astrophysical Journal Letters. - 2041-8205 .- 2041-8213. ; 806:1
  • Tidskriftsartikel (refereegranskat)abstract
    • SMSS J031300.36-670839.3 (hereafter SM0313-6708) is a sub-giant halo star, with no detectable Fe lines and large overabundances of C and Mg relative to Ca. We obtained Very Large Telescope-Ultraviolet and Visual Echelle Spectrograph (UVES) spectra extending to 3060 angstrom showing strong OH A-X band lines enabling an oxygen abundance to be derived. The OH A-X band lines in SM0313-6708 are much stronger than the CH C-X band lines. Spectrum synthesis fits indicate an [O/C] ratio of 0.02 +/- 0.175. Our high signal-to-noise ratio UVES data also enabled us to lower the Fe abundance limit to [Fe/H](< 3D >,NLTE) < -7.52 (3 sigma). These data support our previous suggestion that the star formed from the iron-poor ejecta of a single massive star Population III supernova.
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  • Collet, M. O., et al. (författare)
  • Functional and cognitive rehabilitation interventions during intensive care admission: A protocol for a systematic integrative review
  • 2023
  • Ingår i: Acta Anaesthesiologica Scandinavica. - : Wiley. - 0001-5172 .- 1399-6576. ; 67:5, s. 670-4
  • Tidskriftsartikel (refereegranskat)abstract
    • BackgroundLong-term cognitive impairment occurs in up to 60% of intensive care unit (ICU) survivors. Early use of functional and cognitive rehabilitation interventions, while patients are still in ICU, may reduce cognitive decline. We aim to describe the functional and cognitive interventions used during the ICU stay, the healthcare professionals providing interventions, and the potential impact on functional and cognitive rehabilitation. MethodIn this integrative systematic review, we will include empirical qualitative, quantitative, mixed- and multiple-methods studies assessing the use of functional and cognitive rehabilitation provided in ICU. We will identify studies in relevant electronic databases from 2012 to 2022, which will be screened for eligibility by at least two reviewers. Literature reported as narrative reviews and editorials will be excluded. We will assess the impact of interventions evaluating a cognitive and functional function, quality of life, and all-cause mortality at 6-12 months after ICU discharge. The Revised Cochrane risk-of-bias Tool will be used for assessing risk of bias in clinical trials. For observational studies, we will use the National Institutes of Health Quality Assessment tool for Observational Cohort and Cross-Sectional Studies. Furthermore, we will use the critical appraisal skills programme for qualitative studies and the mixed methods appraisal tool for mixed methods studies. We will construct four matrices, including results describing which ICU patients and healthcare professionals were engaged in rehabilitation, which interventions were included in early rehabilitation in ICU, the potential impact on patient outcomes of rehabilitation interventions provided in ICU and a narrative synthesis of themes. A summary of the main results will be reported using modified GRADE methodology. ImpactThis integrative review will inform the feasibility randomised clinical trial testing the development of a complex intervention targeting functional and cognitive rehabilitation for patients in ICU.
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  • Mussbacher, G., et al. (författare)
  • The Relevance of Model-Driven Engineering Thirty years from Now
  • 2014
  • Ingår i: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). - Cham : Springer International Publishing. - 1611-3349 .- 0302-9743. ; 8767, s. 183-200
  • Tidskriftsartikel (refereegranskat)abstract
    • Although model-driven engineering (MDE) is now an established approach for developing complex software systems, it has not been universally adopted by the software industry. In order to better understand the reasons for this, as well as to identify future opportunities for MDE, we carried out a week-long design thinking experiment with 15 MDE experts. Participants were facilitated to identify the biggest problems with current MDE technologies, to identify grand challenges for society in the near future, and to identify ways that MDE could help to address these challenges. The outcome is a reflection of the current strengths of MDE, an outlook of the most pressing challenges for society at large over the next three decades, and an analysis of key future MDE research opportunities.
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  • Nordlander, Thomas, 1985-, et al. (författare)
  • 3D NLTE Analysis of the Most Iron-Deficient Star, SMSS0313-6708
  • 2017
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 597
  • Tidskriftsartikel (refereegranskat)abstract
    • Context. Models of star formation in the early universe require a detailed understanding of accretion, fragmentation and radiative feedback in metal-free molecular clouds. Different simulations predict different initial mass functions of the first stars, ranging from predominantly low-mass (0.1-10 Msol), to massive (10-100 Msol), or even supermassive (100-1000 Msol). The mass distribution of the first stars should lead to unique chemical imprints on the low-mass second and later generation metal-poor stars still in existence. The chemical composition of SMSS0313-6708, which has the lowest abundances of Ca and Fe of any star known, indicates it was enriched by a single massive supernova.Aims. The photospheres of metal-poor stars are relatively transparent in the UV, which may lead to large three-dimensional (3D) effects as well as departures from local thermodynamical equilibrium (LTE), even for weak spectral lines. If 3D effects and departures from LTE (NLTE) are ignored or treated incorrectly, errors in the inferred abundances may significantly bias the inferred properties of the polluting supernovae. We redetermine the chemical composition of SMSS0313-6708 by means of the most realistic methods available, and compare the results to predicted supernova yields.Methods. A 3D hydrodynamical Stagger model atmosphere and 3D NLTE radiative transfer were applied to obtain accurate abundances for Li, Na, Mg, Al, Ca and Fe. The model atoms employ realistic collisional rates, with no calibrated free parameters.Results. We find significantly higher abundances in 3D NLTE than 1D LTE by 0.8 dex for Fe, and 0.5 dex for Mg, Al and Ca, while Li and Na are unaffected to within 0.03 dex. In particular, our upper limit for [Fe/H] is now a factor ten larger, at [Fe/H] < -6.53 (3 sigma), than previous estimates based on <3D> NLTE (i.e., using averaged 3D models). This higher estimate is due to a conservative upper limit estimation, updated NLTE data, and 3D-<3D> NLTE differences, all of which lead to a higher abundance determination.Conclusions. We find that supernova yields for models in a wide range of progenitor masses reproduce the revised chemical composition. In addition to massive progenitors of 20-60 Msol exploding with low energies (1-2 B, where 1 B = 10^51 erg), we also find good fits for progenitors of 10 Msol, with very low explosion energies (<1 B). We cannot reconcile the new abundances with supernovae or hypernovae with explosion energies above 2.5 B, nor with pair-instability supernovae. 
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  • Zwitter, Tomaz, et al. (författare)
  • The GALAH survey : accurate radial velocities and library of observed stellar template spectra
  • 2018
  • Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 481:1, s. 645-654
  • Tidskriftsartikel (refereegranskat)abstract
    • GALAH is a large-scale magnitude-limited southern stellar spectroscopic survey. Its second data release (GALAH DR2) provides values of stellar parameters and abundances of 23 elements for 342 682 stars (Buder et al.). Here we add a description of the public release of radial velocities with a typical accuracy of 0.1 km s(-1) for 336 215 of these stars, achievable due to the large wavelength coverage, high resolving power, and good signal-to-noise ratio of the observed spectra, but also because convective motions in stellar atmosphere and gravitational redshift from the star to the observer are taken into account. In the process we derive medians of observed spectra that are nearly noiseless, as they are obtained from between 100 and 1116 observed spectra belonging to the same bin with a width of 50 K in temperature, 0.2 dex in gravity, and 0.1 dex in metallicity. Publicly released 1181 median spectra have a resolving power of 28 000 and trace the well-populated stellar types with metallicities between -0.6 and +0.3. Note that radial velocities from GALAH are an excellent match to the accuracy of velocity components along the sky plane derived by Gaia for the same stars. The level of accuracy achieved here is adequate for studies of dynamics within stellar clusters, associations, and streams in the Galaxy. So it may be relevant for studies of the distribution of dark matter.
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  • Amarsi, A. M., et al. (författare)
  • 3D non-LTE line formation of neutral carbon in the Sun
  • 2019
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 624
  • Tidskriftsartikel (refereegranskat)abstract
    • Carbon abundances in late-type stars are important in a variety of astrophysical contexts. However C I lines, one of the main abundance diagnostics, are sensitive to departures from local thermodynamic equilibrium (LTE). We present a model atom for non-LTE analyses of C I lines, that uses a new, physically-motivated recipe for the rates of neutral hydrogen impact excitation. We analyse C I lines in the solar spectrum, employing a three-dimensional (3D) hydrodynamic model solar atmosphere and 3D non-LTE radiative transfer. We find negative non-LTE abundance corrections for C I lines in the solar photosphere, in accordance with previous studies, reaching up to around 0.1 dex in the disk-integrated flux. We also present the first fully consistent 3D non-LTE solar carbon abundance determination: we infer log is an element of(C) = 8.44 ± 0.02, in good agreement with the current standard value. Our models reproduce the observed solar centre-to-limb variations of various C I lines, without any adjustments to the rates of neutral hydrogen impact excitation, suggesting that the proposed recipe may be a solution to the long-standing problem of how to reliably model inelastic collisions with neutral hydrogen in late-type stellar atmospheres.
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  • Amarsi, A. M., et al. (författare)
  • Effective temperature determinations of late-type stars based on 3D non-LTE Balmer line formation
  • 2018
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 615
  • Tidskriftsartikel (refereegranskat)abstract
    • Hydrogen Balmer lines are commonly used as spectroscopic effective temperature diagnostics of late-type stars. However, reliable inferences require accurate model spectra, and the absolute accuracy of classical methods that are based on one-dimensional (1D) hydrostatic model atmospheres and local thermodynamic equilibrium (LTE) is still unclear. To investigate this, we carry out 3D non-LTE calculations for the Balmer lines, performed, for the first time, over an extensive grid of 3D hydrodynamic STAGGER model atmospheres. For H alpha, H beta, and H gamma we find significant 1D non-LTE versus 3D non-LTE differences (3D effects): the outer wings tend to be stronger in 3D models, particularly for H gamma, while the inner wings can be weaker in 3D models, particularly for H alpha. For H alpha, we also find significant 3D LTE versus 3D non-LTE differences (non-LTE effects): in warmer stars (T-eff approximate to 6500 K) the inner wings tend to be weaker in non-LTE models, while at lower effective temperatures (T-eff approximate to 4500 K) the inner wings can be stronger in non-LTE models; the non-LTE effects are more severe at lower metallicities. We test our 3D non-LTE models against observations of well-studied benchmark stars. For the Sun, we infer concordant effective temperatures from H alpha, H beta, and H gamma; however the value is too low by around 50 K which could signal residual modelling shortcomings. For other benchmark stars, our 3D non-LTE models generally reproduce the effective temperatures to within 1 sigma uncertainties. For H alpha, the absolute 3D effects and non-LTE effects can separately reach around 100 K, in terms of inferred effective temperatures. For metal-poor turn-off stars, 1D LTE models of H alpha can underestimate effective temperatures by around 150 K. Our 3D non-LTE model spectra are publicly available, and can be used for more reliable spectroscopic effective temperature determinations.
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  • Amarsi, A. M., et al. (författare)
  • Inelastic O plus H collisions and the O I 777 nm solar centre-to-limb variation
  • 2018
  • Ingår i: Astronomy and Astrophysics. - : EDP SCIENCES S A. - 0004-6361 .- 1432-0746. ; 616
  • Tidskriftsartikel (refereegranskat)abstract
    • The O I 777 nm triplet is a key diagnostic of oxygen abundances in the atmospheres of FGK-type stars; however, it is sensitive to departures from local thermodynamic equilibrium (LTE). The accuracy of non-LTE line formation calculations has hitherto been limited by errors in the inelastic O+H collisional rate coefficients; several recent studies have used the Drawin recipe, albeit with a correction factor S-H that is calibrated to the solar centre-to-limb variation of the triplet. We present a new model oxygen atom that incorporates inelastic O+H collisional rate coefficients using an asymptotic two-electron model based on linear combinations of atomic orbitals, combined with a free electron model based on the impulse approximation. Using a 3D hydrodynamic STAGGER model solar atmosphere and 3D non-LTE line formation calculations, we demonstrate that this physically motivated approach is able to reproduce the solar centre-to-limb variation of the triplet to 0.02 dex, without any calibration of the inelastic collisional rate coefficients or other free parameters. We infer log epsilon(O) = 8.69 +/- 0.03 from the triplet alone, strengthening the case for a low solar oxygen abundance.
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  • Amarsi, A. M., et al. (författare)
  • Non-LTE line formation of Fe in late-type stars - III. 3D non-LTE analysis of metal-poor stars
  • 2016
  • Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 463:2, s. 1518-1533
  • Tidskriftsartikel (refereegranskat)abstract
    • As one of the most important elements in astronomy, iron abundance determinations need to be as accurate as possible. We investigate the accuracy of spectroscopic iron abundance analyses using archetypal metal-poor stars. We perform detailed 3D non-LTE radiative transfer calculations based on 3D hydrodynamic STAGGER model atmospheres, and employ a new model atom that includes new quantum-mechanical neutral hydrogen collisional rate coefficients. With the exception of the red giant HD122563, we find that the 3D non-LTE models achieve Fe I/Fe II excitation and ionization balance as well as not having any trends with equivalent width to within modelling uncertainties of 0.05 dex, all without having to invoke any microturbulent broadening; for HD122563 we predict that the current best parallax-based surface gravity is overestimated by 0.5 dex. Using a 3D non-LTE analysis, we infer iron abundances from the 3D model atmospheres that are roughly 0.1 dex higher than corresponding abundances from 1D MARCS model atmospheres; these differences go in the same direction as the non-LTE effects themselves. We make available grids of departure coefficients, equivalent widths and abundance corrections, calculated on 1D MARCS model atmospheres and horizontally and temporally averaged 3D STAGGER model atmospheres.
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  • Amarsi, A. M., et al. (författare)
  • Non-LTE oxygen line formation in 3D hydrodynamic model stellar atmospheres
  • 2016
  • Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 455:4, s. 3735-3751
  • Tidskriftsartikel (refereegranskat)abstract
    • The O (Iota) 777 nm lines are among the most commonly used diagnostics for the oxygen abundances in the atmospheres of FGK-type stars. However, they form in conditions that are far from local thermodynamic equilibrium (LTE). We explore the departures from LTE of atomic oxygen, and their impact on O I lines, across the STAGGER-grid of three-dimensional hydrodynamic model atmospheres. For the O (Iota) 777 nm triplet, we find significant departures from LTE. These departures are larger in stars with larger effective temperatures, smaller surface gravities, and larger oxygen abundances. We present grids of predicted 3D non-LTE based equivalent widths for the O (Iota) 616 nm, [O (Iota)] 630 nm, [O (I)] 636 nm, and O (Iota) 777 nm lines, as well as abundance corrections to 1D LTE based results.
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  • Amarsi, A. M., et al. (författare)
  • The Galactic chemical evolution of oxygen inferred from 3D non-LTE spectral-line-formation calculations
  • 2015
  • Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966 .- 1745-3933 .- 1745-3925. ; 454:1, s. L11-L15
  • Tidskriftsartikel (refereegranskat)abstract
    • We revisit the Galactic chemical evolution of oxygen, addressing the systematic errors inherent in classical determinations of the oxygen abundance that arise from the use of one-dimensional (1D) hydrostatic model atmospheres and from the assumption of local thermodynamic equilibrium (LTE). We perform detailed 3D non-LTE radiative-transfer calculations for atomic oxygen lines across a grid of 3D hydrodynamic STAGGER model atmospheres for dwarfs and subgiants. We apply our grid of predicted line strengths of the [O I] 630 nm and O I 777 nm lines using accurate stellar parameters from the literature. We infer a steep decay in [O/Fe] for [Fe/H] greater than or similar to -1.0, a plateau [O/Fe] approximate to 0.5 down to [Fe/H] approximate to -2.5, and an increasing trend for [Fe/H] less than or similar to -2.5. Our 3D non-LTE calculations yield overall concordant results from the two oxygen abundance diagnostics.
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  • Amarsi, Anish M., et al. (författare)
  • The solar carbon, nitrogen, and oxygen abundances from a 3D LTE analysis of molecular lines
  • 2021
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 656
  • Tidskriftsartikel (refereegranskat)abstract
    • Carbon, nitrogen, and oxygen are the fourth, sixth, and third most abundant elements in the Sun. Their abundances remain hotly debated due to the so-called solar modelling problem that has persisted for almost 20 years. We revisit this issue by presenting a homogeneous analysis of 408 molecular lines across 12 diagnostic groups, observed in the solar intensity spectrum. Using a realistic 3D radiative-hydrodynamic model solar photosphere and local thermodynamic equilibrium (LTE) line formation, we find log ϵC = 8.47  ±  0.02, log ϵN = 7.89  ±  0.04, and log ϵO = 8.70  ±  0.04. The stipulated uncertainties mainly reflect the sensitivity of the results to the model atmosphere; this sensitivity is correlated between the different diagnostic groups, which all agree with the mean result to within 0.03 dex. For carbon and oxygen, the molecular results are in excellent agreement with our 3D non-LTE analyses of atomic lines. For nitrogen, however, the molecular indicators give a 0.12 dex larger abundance than the atomic indicators, and our best estimate of the solar nitrogen abundance is given by the mean: 7.83 dex. The solar oxygen abundance advocated here is close to our earlier determination of 8.69 dex, and so the present results do not significantly alleviate the solar modelling problem.
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  • Amarsi, Anish, et al. (författare)
  • The 3D non-LTE solar nitrogen abundance from atomic lines
  • 2020
  • Ingår i: Astronomy and Astrophysics. - : EDP SCIENCES S A. - 0004-6361 .- 1432-0746. ; 636
  • Tidskriftsartikel (refereegranskat)abstract
    • Nitrogen is an important element in various fields of stellar and Galactic astronomy, and the solar nitrogen abundance is crucial as a yardstick for comparing different objects in the cosmos. In order to obtain a precise and accurate value for this abundance, we carried out NI line formation calculations in a 3D radiative-hydrodynamicSTAGGER model solar atmosphere in full 3D non-local thermodynamic equilibrium (non-LTE). We used a model atom that includes physically motivated descriptions for the inelastic collisions of NI with free electrons and with neutral hydrogen. We selected five NI lines of high excitation energy to study in detail, based on their strengths and on their being relatively free of blends. We found that these lines are slightly strengthened from non-LTE photon losses and from 3D granulation effects, resulting in negative abundance corrections of around - 0.01 dex and - 0.04 dex, respectively. Our advocated solar nitrogen abundance is log (N) = 7.77, with the systematic 1 sigma uncertainty estimated to be 0.05 dex. This result is consistent with earlier studies after correcting for differences in line selections and equivalent widths.
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  • Aslam, Tayyba N., et al. (författare)
  • A survey of preferences for respiratory support in the intensive care unit for patients with acute hypoxaemic respiratory failure
  • 2023
  • Ingår i: Acta Anaesthesiologica Scandinavica. - : WILEY. - 0001-5172 .- 1399-6576. ; 67:10, s. 1383-1394
  • Tidskriftsartikel (refereegranskat)abstract
    • BackgroundWhen caring for mechanically ventilated adults with acute hypoxaemic respiratory failure (AHRF), clinicians are faced with an uncertain choice between ventilator modes allowing for spontaneous breaths or ventilation fully controlled by the ventilator. The preferences of clinicians managing such patients, and what motivates their choice of ventilator mode, are largely unknown. To better understand how clinicians preferences may impact the choice of ventilatory support for patients with AHRF, we issued a survey to an international network of intensive care unit (ICU) researchers.MethodsWe distributed an online survey with 32 broadly similar and interlinked questions on how clinicians prioritise spontaneous or controlled ventilation in invasively ventilated patients with AHRF of different severity, and which factors determine their choice.ResultsThe survey was distributed to 1337 recipients in 12 countries. Of these, 415 (31%) completed the survey either fully (52%) or partially (48%). Most respondents were identified as medical specialists (87%) or physicians in training (11%). Modes allowing for spontaneous ventilation were considered preferable in mild AHRF, with controlled ventilation considered as progressively more important in moderate and severe AHRF. Among respondents there was strong support (90%) for a randomised clinical trial comparing spontaneous with controlled ventilation in patients with moderate AHRF.ConclusionsThe responses from this international survey suggest that there is clinical equipoise for the preferred ventilator mode in patients with AHRF of moderate severity. We found strong support for a randomised trial comparing modes of ventilation in patients with moderate AHRF.
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28.
  • Barklem, Paul S., et al. (författare)
  • Partition functions and equilibrium constants for diatomic molecules and atoms of astrophysical interest
  • 2016
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 588
  • Tidskriftsartikel (refereegranskat)abstract
    • Partition functions and dissociation equilibrium constants are presented for 291 diatomic molecules for temperatures in the range from near absolute zero to 10 000 K, thus providing data for many diatomic molecules of astrophysical interest at low temperature. The calculations are based on molecular spectroscopic data from the book of Huber & Herzberg (1979, Constants of Diatomic Molecules) with significant improvements from the literature, especially updated data for ground states of many of the most important molecules by Irikura (2007, J. Phys. Chem. Ref. Data, 36, 389). Dissociation energies are collated from compilations of experimental and theoretical values. Partition functions for 284 species of atoms for all elements from H to U are also presented based on data collected at NIST. The calculated data are expected to be useful for modelling a range of low density astrophysical environments, especially star-forming regions, protoplanetary disks, the interstellar medium, and planetary and cool stellar atmospheres. The input data, which will be made available electronically, also provides a possible foundation for future improvement by the community.
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29.
  • Caffau, E., et al. (författare)
  • Systematic investigation of chemical abundances derived using IR spectra obtained with GIANO
  • 2019
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 622
  • Tidskriftsartikel (refereegranskat)abstract
    • Context. Detailed chemical abundances of Galactic stars are needed in order to improve our knowledge of the formation and evolution of our galaxy, the Milky Way. Aims. We took advantage of the GIANO archive spectra to select a sample of Galactic disc stars in order to derive their chemical inventory and to compare the abundances we derived from these infrared spectra to the chemical pattern derived from optical spectra. Methods. We analysed high-quality spectra of 40 stars observed with GIANO. We derived the stellar parameters from the photometry and the Gaia data-release 2 (DR2) parallax; the chemical abundances were derived with the code MyGIsFOS. For a subsample of stars we compared the chemical pattern derived from the GIANO spectra with the abundances derived from optical spectra. We derived P abundances for all 40 stars, increasing the number of Galactic stars for which phosphorus abundance is known. Results. We could derive abundances of 14 elements, 8 of which are also derived from optical spectra. The comparison of the abundances derived from infrared and optical spectra is very good. The chemical pattern of these stars is the one expected for Galactic disc stars and is in agreement with the results from the literature. Conclusions. GIANO is providing the astronomical community with an extremely useful instrument, able to produce spectra with high resolution and a wide wavelength range in the infrared.
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30.
  • Creevey, O. L., et al. (författare)
  • Fundamental properties of the Population II fiducial stars HD 122563 and Gmb 1830 from CHARA interferometric observations
  • 2012
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 545, s. A17-
  • Tidskriftsartikel (refereegranskat)abstract
    • We have determined the angular diameters of two metal-poor stars, HD 122563 and Gmb 1830, using CHARA and Palomar Testbed Interferometer observations. For the giant star HD 122563, we derive an angular diameter theta(3D) = 0.940 +/- 0.011 milliarcseconds (mas) using limb-darkening from 3D convection simulations and for the dwarf star Gmb 1830 (HD 103095) we obtain a 1D limb-darkened angular diameter theta(1D) = 0.679 +/- 0.007 mas. Coupling the angular diameters with photometry yields effective temperatures with precisions better than 55 K (T-eff = 4598 +/- 41 K and 4818 +/- 54 K - for the giant and the dwarf star, respectively). Including their distances results in very well-determined luminosities and radii (L = 230 +/- 7 L-circle dot, R = 24.1 +/- 1.1 R-circle dot and L = 0.213 +/- 0.002 L-circle dot, R = 0.665 +/- 0.014 R-circle dot, respectively). We used the CESAM2k stellar structure and evolution code in order to produce models that fit the observational data. We found values of the mixing-length parameter alpha (which describes 1D convection) that depend on the mass of the star. The masses were determined from the models with precisions of < 3% and with the well-measured radii excellent constraints on the surface gravity are obtained (log g = 1.60 +/- 0.04, 4.59 +/- 0.02 dex, respectively). The very small errors on both log g and T-eff provide stringent constraints for spectroscopic analyses given the sensitivity of abundances to both of these values. The precise determination of T-eff for the two stars brings into question the photometric scales for metal-poor stars.
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31.
  • Escaned, Javier, et al. (författare)
  • Applied coronary physiology for planning and guidance of percutaneous coronary interventions. A clinical consensus statement from the European Association of Percutaneous Cardiovascular Interventions (EAPCI) of the European Society of Cardiology
  • 2023
  • Ingår i: EuroIntervention. - : Europa Digital & Publishing. - 1774-024X .- 1969-6213. ; 19:6, s. 464-
  • Tidskriftsartikel (refereegranskat)abstract
    • The clinical value of fractional flow reserve and non-hyperaemic pressure ratios are well established in determining an indication for percutaneous coronary intervention (PCI) in patients with coronary artery disease (CAD). In addition, over the last 5 years we have witnessed a shift towards the use of physio-logy to enhance procedural planning, assess post-PCI functional results, and guide PCI optimisation. In this regard, clinical studies have reported compelling data supporting the use of longitudinal vessel analysis, obtained with pressure guidewire pullbacks, to better understand how obstructive CAD contributes to myocardial ischaemia, to establish the likelihood of functionally successful PCI, to identify the presence and location of residual flow-limiting stenoses and to predict long-term outcomes. The introduction of new functional coronary angiography tools, which merge angiographic information with fluid dynamic equations to deliver information equivalent to intracoronary pressure measurements, are now available and potentially also applicable to these endeavours. Furthermore, the ability of longitudinal vessel analysis to predict the functional results of stenting has played an integral role in the evolving field of simulated PCI. Nevertheless, it is important to have an awareness of the value and challenges of physiology-guided PCI in specific clinical and anatomical contexts. The main aim of this European Association of Percutaneous Cardiovascular Interventions clinical consensus statement is to offer up-to-date evidence and expert opin-ion on the use of applied coronary physiology for procedural PCI planning, disease pattern recognition and post-PCI optimisation.
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32.
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33.
  • Gallagher, A. J., et al. (författare)
  • Observational constraints on the origin of the elements II. 3D non-LTE formation of BaII lines in the solar atmosphere
  • 2020
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 634
  • Tidskriftsartikel (refereegranskat)abstract
    • Context. The pursuit of more realistic spectroscopic modelling and consistent abundances has led us to begin a new series of papers designed to improve current solar and stellar abundances of various atomic species. To achieve this, we have begun updating the three-dimensional (3D) non-local thermodynamic equilibrium (non-LTE) radiative transfer code, MULTI3D, and the equivalent one-dimensional (1D) non-LTE radiative transfer code, MULTI 2.3.Aims. We examine our improvements to these codes by redetermining the solar barium abundance. Barium was chosen for this test as it is an important diagnostic element of the s-process in the context of galactic chemical evolution. New BaII + H collisional data for excitation and charge exchange reactions computed from first principles had recently become available and were included in the model atom. The atom also includes the effects of isotopic line shifts and hyperfine splitting.Methods. A grid of 1D LTE barium lines were constructed with MULTI 2.3 and fit to the four BaII lines available to us in the optical region of the solar spectrum. Abundance corrections were then determined in 1D non-LTE, 3D LTE, and 3D non-LTE. A new 3D non-LTE solar barium abundance was computed from these corrections.Results. We present for the first time the full 3D non-LTE barium abundance of A(Ba) = 2.27 +/- 0.02 +/- 0.01, which was derived from four individual fully consistent barium lines. Errors here represent the systematic and random errors, respectively.
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34.
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35.
  • Gruyters, Pieter, et al. (författare)
  • Atomic diffusion and mixing in old stars IV. Weak abundance trends in the globular cluster NGC6752
  • 2013
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 555, s. A31-
  • Tidskriftsartikel (refereegranskat)abstract
    • Context. Atomic diffusion in stars can create systematic trends of surface abundances with evolutionary stage. Globular clusters off er useful laboratories to put observational constraints on this theory as one needs to compare abundances in unevolved and evolved stars, all drawn from the same stellar population. Aims. Atomic diffusion and additional mixing has been shown to be at work in the globular cluster NGC6397 at a metallicity of [Fe/H] similar to -2.1. We investigate possible abundance trends in Li, Mg, Ca, Ti, Sc, and Fe with evolutionary stage in another globular cluster NGC6752 at a metallicity of [Fe/H] similar to -1.6. This in order to better constrain stellar structure models including atomic diffusion and additional mixing. Methods. We performed a differential abundance analysis on VLT/FLAMES-UVES data of 16 stars in four groups between the turnoff point and the red giant branch. Continuum normalisation of the stellar spectra was performed in an automated way using DAOSPEC. Differential abundances relative to the sun were derived by fitting synthetic spectra to individual lines in the stellar spectrum. Results. We find weak systematic abundance trends with evolutionary phase for Fe, Sc, Ti, and Ca. The individual trends are weaker than the trends in NGC6397 and only significant at the 1-sigma level. However, the combined trend shows a significance on the 2-sigma level. The trends are best explained by stellar-structure models including atomic diffusion with more efficient additional mixing than needed in NGC6397. The model allows to correct for sub-primordial stellar lithium abundances of the stars on the Spite plateau. Conclusions. Abundance trends for groups of elements, differently affected by atomic diffusion and additional mixing, are identified. Although the significance of the trends is weak, they all seem to indicate that atomic diffusion is operational along the evolutionary sequence of NGC6752. The trends are weaker than those observed in NGC6397, which is perhaps due to more efficient mixing. Using models of atomic diffusion including efficient additional mixing, we find a diffusion-corrected primordial lithium abundance of log epsilon(Li) = 2.58 +/- 0.10, in agreement with WMAP-calibrated Big-Bang nucleosynthesis predictions within the mutual 1-sigma uncertainties.
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36.
  • Halvorsen, K., et al. (författare)
  • Patients' experiences of well-being when being cared for in the intensive care unit—An integrative review
  • 2022
  • Ingår i: Journal of Clinical Nursing. - : Wiley. - 0962-1067 .- 1365-2702. ; 31:1-2, s. 3-19
  • Tidskriftsartikel (refereegranskat)abstract
    • Objective: The aim of this integrative review was to identify facilitators and barriers to patients’ well-being when being cared for in an ICU setting, from the perspective of the patients. Background: To become critically ill and hospitalised in an ICU is a stressful, chaotic event due to the life-threatening condition itself, as well as therapeutic treatments and the environment. A growing body of evidence has revealed that patients often suffer from physical, psychological and cognitive problems after an ICU stay. Several strategies, such as sedation and pain management, are used to reduce stress and increase well-being during ICU hospitalisation, but the ICU experience nevertheless affects the body and mind. Design; Methods: Since research exploring patients’ sense of well-being in an ICU setting is limited, an integrative review approach was selected. Searches were performed in CINAHL, Medline, Psych Info, Eric and EMBASE. After reviewing 66 studies, 12 studies were included in the integrative review. Thematic analysis was used to analyse the studies. The PRISMA checklist for systematic reviews was used. Results: The results are presented under one main theme, ‘Well-being as a multidimensional experience—interwoven in barriers and facilitators’ and six sub-themes representing barriers to and facilitators of well-being in an ICU. Barriers identified were physical stressors, emotional stressors, environmental disturbances and insecurity relating to time and space. Facilitators were meeting physical needs and activities that included dimensions of a caring and relational environment. Conclusion: Our main findings were that experiences of well-being were multidimensional and included physical, emotional, relational and environmental aspects, and they were more often described through barriers than facilitators of well-being. Relevance for clinical practice: This integrative review has shown that it is necessary to adopt an individual focus on patient well-being in an ICU setting since physical, emotional, relational and environmental stressors might impact each patient differently. © 2021 The Authors. Journal of Clinical Nursing published by John Wiley & Sons Ltd.
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38.
  • Jönsson, Henrik, et al. (författare)
  • Sulphur abundances in halo giants from the [S I] line at 1082 nm and the [S I] triplet around 1045 nm
  • 2011
  • Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 530, s. A144-
  • Tidskriftsartikel (refereegranskat)abstract
    • Context. It is still debated whether or not the Galactic chemical evolution of sulphur in the halo follows the flat trend with [Fe/H] that is ascribed to the result of explosive nucleosynthesis in type II SNe. It has been suggested that the disagreement between different investigations of sulphur abundances in halo stars might be owing to problems with the diagnostics used, that a new production source of sulphur might be needed in the early Universe, like hypernovae, or that the deposition of supernova ejecta into the interstellar medium is time-delayed. Aims. The aim of this study is to try to clarify this situation by measuring the sulphur abundance in a sample of halo giants using two diagnostics: the S I triplet around 1045 nm and the [S I] line at 1082 nm. The latter of the two is not believed to be sensitive to non-LTE effects. We can thereby minimize the uncertainties in the diagnostic used and estimate the usefulness of the triplet for the sulphur determination in halo K giants. We will also be able to compare our sulphur abundance differences from the two diagnostics with the expected non-LTE effects in the 1045 nm triplet previously calculated by others. Methods. High-resolution near-infrared spectra of ten K giants were recorded using the spectrometer CRIRES mounted at VLT. Two standard settings were used, one covering the S I triplet and one covering the [S I] line. The sulphur abundances were individually determined with equivalent widths and synthetic spectra for the two diagnostics using tailored 1D model atmospheres and relying on non-LTE corrections from the litterature. Effects of convective inhomogeneities in the stellar atmospheres are investigated. Results. The sulphur abundances derived from both the [S I] line and the non-LTE corrected 1045 nm triplet favor a flat trend for the evolution of sulphur. In contrast to some previous studies, we saw no "high" values of [S/Fe] in our sample. Conclusions. We corroborate the flat trend in the [S/Fe] vs. [Fe/H] plot for halo stars found in some previous studies but do not find a scatter or a rise in [S/Fe] as obtained in other works. We find the sulphur abundances deduced from the non-LTE corrected triplet to be somewhat lower than the abundances from the [S I] line, possibly indicating too large non-LTE corrections. Considering 3D modeling, however, they might instead be too small. Moreover, we show that the [S I] line can be used as a sulphur diagnostic down to [Fe/H] similar to - 2.3 in giants.
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39.
  • Krishnaswamy, Jayendra Kumar, et al. (författare)
  • Migratory CD11b+ conventional dendritic cells induce T follicular helper cell-dependent antibody responses.
  • 2017
  • Ingår i: Science immunology. - : American Association for the Advancement of Science (AAAS). - 2470-9468. ; 2:18
  • Tidskriftsartikel (refereegranskat)abstract
    • T follicular helper (Tfh) cells are a subset of CD4+ T cells that promote antibody production during vaccination. Conventional dendritic cells (cDCs) efficiently prime Tfh cells; however, conclusions regarding which cDC instructs Tfh cell differentiation have differed between recent studies. We found that these discrepancies might exist because of the unusual sites used for immunization in murine models, which differentially bias which DC subsets access antigen. We used intranasal immunization as a physiologically relevant route of exposure that delivers antigen to all tissue DC subsets. Using a combination of mice in which the function of individual DC subsets is impaired and different antigen formulations, we determined that CD11b+ migratory type 2 cDCs (cDC2s) are necessary and sufficient for Tfh induction. DC-specific deletion of the guanine nucleotide exchange factor DOCK8 resulted in an isolated loss of CD11b+ cDC2, but not CD103+ cDC1, migration to lung-draining lymph nodes. Impaired cDC2 migration or development in DC-specific Dock8 or Irf4 knockout mice, respectively, led to reduced Tfh cell priming, whereas loss of CD103+ cDC1s in Batf3-/- mice did not. Loss of cDC2-dependent Tfh cell priming impaired antibody-mediated protection from live influenza virus challenge. We show that migratory cDC2s uniquely carry antigen into the subanatomic regions of the lymph node where Tfh cell priming occurs-the T-B border. This work identifies the DC subset responsible for Tfh cell-dependent antibody responses, particularly when antigen dose is limiting or is encountered at a mucosal site, which could ultimately inform the formulation and delivery of vaccines.
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40.
  • Lind, Karin, et al. (författare)
  • Non-LTE line formation of Fe in late-type stars - IV. Modelling of the solar centre-to-limb variation in 3D
  • 2017
  • Ingår i: Monthly notices of the Royal Astronomical Society. - : OXFORD UNIV PRESS. - 0035-8711 .- 1365-2966. ; 468:4, s. 4311-4322
  • Tidskriftsartikel (refereegranskat)abstract
    • Our ability to model the shapes and strengths of iron lines in the solar spectrum is a critical test of the accuracy of the solar iron abundance, which sets the absolute zero-point of all stellar metallicities. We use an extensive 463-level Fe atom with new photoionization cross-sections for Fe I and quantum mechanical calculations of collisional excitation and charge transfer with neutral hydrogen; the latter effectively remove a free parameter that has hampered all previous line formation studies of Fe in non-local thermodynamic equilibrium (NLTE). For the first time, we use realistic 3D NLTE calculations of Fe for a quantitative comparison to solar observations. We confront our theoretical line profiles with observations taken at different viewing angles across the solar disc with the Swedish 1-m Solar Telescope. We find that 3D modelling well reproduces the observed centre-to-limb behaviour of spectral lines overall, but highlight aspects that may require further work, especially cross-sections for inelastic collisions with electrons. Our inferred solar iron abundance is log(epsilon(Fe)) = 7.48 +/- 0.04 dex.
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41.
  • Marino, A. F., et al. (författare)
  • Iron and s-elements abundance variations in NGC 5286 : comparison with 'anomalous' globular clusters and Milky Way satellites
  • 2015
  • Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 450:1, s. 815-845
  • Tidskriftsartikel (refereegranskat)abstract
    • We present a high-resolution spectroscopic analysis of 62 red giants in the Milky Way globular cluster (GC) NGC 5286. We have determined abundances of representative light proton-capture, a, Fe-peak and neutron-capture element groups, and combined them with photometry of multiple sequences observed along the colour-magnitude diagram. Our principal results are: (i) a broad, bimodal distribution in s-process element abundance ratios, with two main groups, the s-poor and s-rich groups; (ii) substantial star-to-star Fe variations, with the s-rich stars having higher Fe, e.g. <[Fe/H]>(s-rich) - <[Fe/H]>(s-poor) similar to 0.2 dex; and (iii) the presence of O-Na-Al (anti) correlations in both stellar groups. We have defined a new photometric index, c(BVI) = (B - V) -(V - I), to maximize the separation in the colour-magnitude diagram between the two stellar groups with different Fe and s-element content, and this index is not significantly affected by variations in light elements (such as the O-Na anticorrelation). The variations in the overall metallicity present in NGC 5286 add this object to the class of anomalous GCs. Furthermore, the chemical abundance pattern of NGC 5286 resembles that observed in some of the anomalous GCs, e.g. M 22, NGC 1851, M 2, and the more extreme omega Centauri, that also show internal variations in s-elements, and in light elements within stars with different Fe and s-elements content. In view of the common variations in s-elements, we propose the term s-Fe-anomalous GCs to describe this sub-class of objects. The similarities in chemical abundance ratios between these objects strongly suggest similar formation and evolution histories, possibly associated with an origin in tidally disrupted dwarf satellites.
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44.
  • Penvern, H., et al. (författare)
  • 3D fibre orientation reconstruction around a knot in Douglas fir
  • 2023
  • Ingår i: 3rd ECCOMAS Thematic Conference on Computational Methods in Wood Mechanics (CompWood 2023), September 5-8, 2023, Dresden, Germany. - : International Center for Numerical Methods in Engineering (CIMNE). - 9788412322279 ; , s. 137-138
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