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1.	Clark, SL, et al. (author) Deep Sequencing of 71 Candidate Genes to Characterize Variation Associated with Alcohol Dependence 2017 In: Alcoholism, clinical and experimental research. - : Wiley. - 1530-0277 .- 0145-6008. ; 41:4, s. 711-718 Journal article (peer-reviewed)
2.	Clark, SL, et al. (author) Deep Sequencing of Three Loci Implicated in Large-Scale Genome-Wide Association Study Smoking Meta-Analyses 2016 In: Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco. - : Oxford University Press (OUP). - 1469-994X. ; 18:5, s. 626-631 Journal article (peer-reviewed)
3.	Miller, MJC, et al. (author) A tandem mass spectrometric approach to determination of chondroitin/dermatan sulfate oligosaccharide glycoforms 2006 In: Glycobiology. - : Oxford University Press (OUP). - 1460-2423 .- 0959-6658. ; 16:6, s. 502-513 Journal article (peer-reviewed)abstract Dermatan sulfate (DS) chains are variants of chondroitin sulfate (CS) that are expressed in mammalian extracellular matrices and are particularly prevalent in skin. DS has been implicated in varied biological processes including wound repair, infection, cardiovascular disease, tumorigenesis, and fibrosis. The biological activities of DS have been attributed to its high content of IdoA(alpha 1-3)GalNAc4S(beta 1-4) disaccharide units. Mature CS/DS chains consist of blocks with high and low GlcA/IdoA ratios, and sulfation may occur at the 4- and/or 6-position of GalNAc and 2-position of IdoA. Traditional methods for the analysis of CS/DS chains involve differential digestion with specific chondroitinases followed by steps of chromatographic isolation of the products and di-saccharide analysis on the individual fraction. This work reports the use of tandem mass spectrometry to determine the patterns of sulfation and epimerization of CS/DS oligosaccharides in a single step. The approach is first validated and then applied to a series of skin DS samples and to decorins from three different tissues. DS samples ranged from 74 to 99% of CSB-like repeats, using this approach. Decorin samples ranged from 30% CSB-like repeats for those samples from articular cartilage to 75% for those from sclera. These values agree with known levels of glucuronyl C5-epimerase in these tissues.
4.	Shao, WG, et al. (author) The SysteMHC Atlas project 2018 In: Nucleic acids research. - : Oxford University Press (OUP). - 1362-4962 .- 0305-1048. ; 46:D1, s. D1237-D1247 Journal article (peer-reviewed)
5.	Tsybin, YO, et al. (author) The Russian Mass Spectrometry Interest Group at ASMS: Over 20 Years of Science and Water Polo 2019 In: Journal of the American Society for Mass Spectrometry. - : American Chemical Society (ACS). - 1879-1123 .- 1044-0305. ; 30:10, s. 2178-2182 Journal article (peer-reviewed)

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Type of publication: journal article (5)

Type of content: peer-reviewed (5)

Author/Editor: Sullivan, PF (2); Aberg, KA (2); McClay, JL (2); van den Oord, EJ (2); Adkins, DE (2); Nerella, S (2); show more...; Xie, LY (2); Clark, SL (2); Kumar, G (2); Crowley, JJ (2); Copeland, WE (2); Maes, H (2); Costello, EJ (2); Zubarev, RA (2); Peterson, RE (2); Collins, AL (2); Silberg, JL (2); Shabalin, AA (2); Wang, Q. (1); Gao, GM (1); Ternette, N. (1); Sette, A (1); Ytterberg, AJ (1); Malmström, Anders (1); Peters, B (1); van Veelen, PA (1); Nielsen, M. (1); McGue, M (1); Iacono, WG (1); Schuster, H (1); Hilliard, CE (1); Wolski, W (1); Schlapbach, R (1); Tsybin, YO (1); Marino, F. (1); Ottenhoff, THM (1); Kaufmann, SHE (1); Heck, AJR (1); Quackenbush, CR (1); Vrieze, SI (1); Quakenbush, CR (1); Hillard, CE (1); Zaia, J (1); De Souza, GA (1); Rammensee, HG (1); Thibault, P. (1); Bondarenko, PV (1); Sollid, LM (1); Purcell, AW (1); Moritz, RL (1); show less...

University: Karolinska Institutet (4); Lund University (1)

Language: English (5)

Research subject (UKÄ/SCB): Natural sciences (2); Medical and Health Sciences (1)

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