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  • 2021
  • swepub:Mat__t
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  • Glasbey, JC, et al. (författare)
  • 2021
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  • Thomas, HS, et al. (författare)
  • 2019
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  • Tabiri, S, et al. (författare)
  • 2021
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  • Bravo, L, et al. (författare)
  • 2021
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  • 2021
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  • Kanai, M, et al. (författare)
  • 2023
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  • Blokland, G. A. M., et al. (författare)
  • Sex-Dependent Shared and Nonshared Genetic Architecture Across Mood and Psychotic Disorders
  • 2022
  • Ingår i: Biological Psychiatry. - : Elsevier BV. - 0006-3223 .- 1873-2402. ; 91:1, s. 102-117
  • Tidskriftsartikel (refereegranskat)abstract
    • Background: Sex differences in incidence and/or presentation of schizophrenia (SCZ), major depressive disorder (MDD), and bipolar disorder (BIP) are pervasive. Previous evidence for shared genetic risk and sex differences in brain abnormalities across disorders suggest possible shared sex-dependent genetic risk. Methods: We conducted the largest to date genome-wide genotype-by-sex (G×S) interaction of risk for these disorders using 85,735 cases (33,403 SCZ, 19,924 BIP, and 32,408 MDD) and 109,946 controls from the PGC (Psychiatric Genomics Consortium) and iPSYCH. Results: Across disorders, genome-wide significant single nucleotide polymorphism–by-sex interaction was detected for a locus encompassing NKAIN2 (rs117780815, p = 3.2 × 10−8), which interacts with sodium/potassium-transporting ATPase (adenosine triphosphatase) enzymes, implicating neuronal excitability. Three additional loci showed evidence (p < 1 × 10−6) for cross-disorder G×S interaction (rs7302529, p = 1.6 × 10−7; rs73033497, p = 8.8 × 10−7; rs7914279, p = 6.4 × 10−7), implicating various functions. Gene-based analyses identified G×S interaction across disorders (p = 8.97 × 10−7) with transcriptional inhibitor SLTM. Most significant in SCZ was a MOCOS gene locus (rs11665282, p = 1.5 × 10−7), implicating vascular endothelial cells. Secondary analysis of the PGC-SCZ dataset detected an interaction (rs13265509, p = 1.1 × 10−7) in a locus containing IDO2, a kynurenine pathway enzyme with immunoregulatory functions implicated in SCZ, BIP, and MDD. Pathway enrichment analysis detected significant G×S interaction of genes regulating vascular endothelial growth factor receptor signaling in MDD (false discovery rate-corrected p < .05). Conclusions: In the largest genome-wide G×S analysis of mood and psychotic disorders to date, there was substantial genetic overlap between the sexes. However, significant sex-dependent effects were enriched for genes related to neuronal development and immune and vascular functions across and within SCZ, BIP, and MDD at the variant, gene, and pathway levels. © 2021 Society of Biological Psychiatry
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  • Fenstermacher, M.E., et al. (författare)
  • DIII-D research advancing the physics basis for optimizing the tokamak approach to fusion energy
  • 2022
  • Ingår i: Nuclear Fusion. - : IOP Publishing. - 0029-5515 .- 1741-4326. ; 62:4
  • Tidskriftsartikel (refereegranskat)abstract
    • DIII-D physics research addresses critical challenges for the operation of ITER and the next generation of fusion energy devices. This is done through a focus on innovations to provide solutions for high performance long pulse operation, coupled with fundamental plasma physics understanding and model validation, to drive scenario development by integrating high performance core and boundary plasmas. Substantial increases in off-axis current drive efficiency from an innovative top launch system for EC power, and in pressure broadening for Alfven eigenmode control from a co-/counter-I p steerable off-axis neutral beam, all improve the prospects for optimization of future long pulse/steady state high performance tokamak operation. Fundamental studies into the modes that drive the evolution of the pedestal pressure profile and electron vs ion heat flux validate predictive models of pedestal recovery after ELMs. Understanding the physics mechanisms of ELM control and density pumpout by 3D magnetic perturbation fields leads to confident predictions for ITER and future devices. Validated modeling of high-Z shattered pellet injection for disruption mitigation, runaway electron dissipation, and techniques for disruption prediction and avoidance including machine learning, give confidence in handling disruptivity for future devices. For the non-nuclear phase of ITER, two actuators are identified to lower the L-H threshold power in hydrogen plasmas. With this physics understanding and suite of capabilities, a high poloidal beta optimized-core scenario with an internal transport barrier that projects nearly to Q = 10 in ITER at ∼8 MA was coupled to a detached divertor, and a near super H-mode optimized-pedestal scenario with co-I p beam injection was coupled to a radiative divertor. The hybrid core scenario was achieved directly, without the need for anomalous current diffusion, using off-axis current drive actuators. Also, a controller to assess proximity to stability limits and regulate β N in the ITER baseline scenario, based on plasma response to probing 3D fields, was demonstrated. Finally, innovative tokamak operation using a negative triangularity shape showed many attractive features for future pilot plant operation.
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  • 2019
  • Tidskriftsartikel (refereegranskat)
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  • Ademuyiwa, Adesoji O., et al. (författare)
  • Determinants of morbidity and mortality following emergency abdominal surgery in children in low-income and middle-income countries
  • 2016
  • Ingår i: BMJ Global Health. - : BMJ Publishing Group Ltd. - 2059-7908. ; 1:4
  • Tidskriftsartikel (refereegranskat)abstract
    • Background: Child health is a key priority on the global health agenda, yet the provision of essential and emergency surgery in children is patchy in resource-poor regions. This study was aimed to determine the mortality risk for emergency abdominal paediatric surgery in low-income countries globally.Methods: Multicentre, international, prospective, cohort study. Self-selected surgical units performing emergency abdominal surgery submitted prespecified data for consecutive children aged <16 years during a 2-week period between July and December 2014. The United Nation's Human Development Index (HDI) was used to stratify countries. The main outcome measure was 30-day postoperative mortality, analysed by multilevel logistic regression.Results: This study included 1409 patients from 253 centres in 43 countries; 282 children were under 2 years of age. Among them, 265 (18.8%) were from low-HDI, 450 (31.9%) from middle-HDI and 694 (49.3%) from high-HDI countries. The most common operations performed were appendectomy, small bowel resection, pyloromyotomy and correction of intussusception. After adjustment for patient and hospital risk factors, child mortality at 30 days was significantly higher in low-HDI (adjusted OR 7.14 (95% CI 2.52 to 20.23), p<0.001) and middle-HDI (4.42 (1.44 to 13.56), p=0.009) countries compared with high-HDI countries, translating to 40 excess deaths per 1000 procedures performed.Conclusions: Adjusted mortality in children following emergency abdominal surgery may be as high as 7 times greater in low-HDI and middle-HDI countries compared with high-HDI countries. Effective provision of emergency essential surgery should be a key priority for global child health agendas.
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  • Sumpter, N. A., et al. (författare)
  • Association of Gout Polygenic Risk Score With Age at Disease Onset and Tophaceous Disease in European and Polynesian Men With Gout
  • 2023
  • Ingår i: Arthritis & Rheumatology. - : Wiley. - 2326-5191 .- 2326-5205. ; 75:5, s. 816-825
  • Tidskriftsartikel (refereegranskat)abstract
    • Objective. To determine whether a gout polygenic risk score (PRS) is associated with age at gout onset and tophaceous disease in European, East Polynesian, and West Polynesian men and women with gout. Methods. A 19-variant gout PRS was produced in 7 European gout cohorts (N = 4,016), 2 East Polynesian gout cohorts (N = 682), and 1 West Polynesian gout cohort (N = 490). Sex-stratified regression models were used to estimate the relationship between the PRS and age at gout onset and tophaceous disease. Results. The PRS was associated with earlier age at gout onset in men (beta = -3.61 in years per unit PRS [95% confidence interval (95% CI) -4.32, -2.90] in European men; beta = -6.35 [95% CI -8.91, -3.80] in East Polynesian men; beta = -3.51 [95% CI -5.46, -1.57] in West Polynesian men) but not in women (beta = 0.07 [95% CI -2.32, 2.45] in European women; beta = 0.20 [95% CI -7.21, 7.62] in East Polynesian women; beta -3.33 [95% CI -9.28, 2.62] in West Polynesian women). The PRS showed a positive association with tophaceous disease in men (odds ratio [OR] for the association 1.15 [95% CI 1.00, 1.31] in European men; OR 2.60 [95% CI 1.66, 4.06] in East Polynesian men; OR 1.53 [95% CI 1.07, 2.19] in West Polynesian men) but not in women (OR for the association 0.68 [95% CI 0.42, 1.10] in European women; OR 1.45 [95% CI 0.39, 5.36] in East Polynesian women). The PRS association with age at gout onset was robust to the removal of ABCG2 variants from the PRS in European and East Polynesian men (beta = -2.42 [95% CI -3.37, -1.46] and beta = -6.80 [95% CI -10.06, -3.55], respectively) but not in West Polynesian men (beta = -1.79 [95% CI -4.74, 1.16]). Conclusion. Genetic risk variants for gout also harbor risk for earlier age at gout onset and tophaceous disease in European and Polynesian men. Our findings suggest that earlier gout onset involves the accumulation of gout risk alleles in men but perhaps not in women, and that this genetic risk is shared across multiple ancestral groups.
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  • De Jong, VMT, et al. (författare)
  • Clinical prediction models for mortality in patients with covid-19: external validation and individual participant data meta-analysis
  • 2022
  • Ingår i: BMJ (Clinical research ed.). - : BMJ. - 1756-1833. ; 378, s. e069881-
  • Tidskriftsartikel (refereegranskat)abstract
    • ObjectiveTo externally validate various prognostic models and scoring rules for predicting short term mortality in patients admitted to hospital for covid-19.DesignTwo stage individual participant data meta-analysis.SettingSecondary and tertiary care.Participants46 914 patients across 18 countries, admitted to a hospital with polymerase chain reaction confirmed covid-19 from November 2019 to April 2021.Data sourcesMultiple (clustered) cohorts in Brazil, Belgium, China, Czech Republic, Egypt, France, Iran, Israel, Italy, Mexico, Netherlands, Portugal, Russia, Saudi Arabia, Spain, Sweden, United Kingdom, and United States previously identified by a living systematic review of covid-19 prediction models published inThe BMJ, and through PROSPERO, reference checking, and expert knowledge.Model selection and eligibility criteriaPrognostic models identified by the living systematic review and through contacting experts. A priori models were excluded that had a high risk of bias in the participant domain of PROBAST (prediction model study risk of bias assessment tool) or for which the applicability was deemed poor.MethodsEight prognostic models with diverse predictors were identified and validated. A two stage individual participant data meta-analysis was performed of the estimated model concordance (C) statistic, calibration slope, calibration-in-the-large, and observed to expected ratio (O:E) across the included clusters.Main outcome measures30 day mortality or in-hospital mortality.ResultsDatasets included 27 clusters from 18 different countries and contained data on 46 914patients. The pooled estimates ranged from 0.67 to 0.80 (C statistic), 0.22 to 1.22 (calibration slope), and 0.18 to 2.59 (O:E ratio) and were prone to substantial between study heterogeneity. The 4C Mortality Score by Knight et al (pooled C statistic 0.80, 95% confidence interval 0.75 to 0.84, 95% prediction interval 0.72 to 0.86) and clinical model by Wang et al (0.77, 0.73 to 0.80, 0.63 to 0.87) had the highest discriminative ability. On average, 29% fewer deaths were observed than predicted by the 4C Mortality Score (pooled O:E 0.71, 95% confidence interval 0.45 to 1.11, 95% prediction interval 0.21 to 2.39), 35% fewer than predicted by the Wang clinical model (0.65, 0.52 to 0.82, 0.23 to 1.89), and 4% fewer than predicted by Xie et al’s model (0.96, 0.59 to 1.55, 0.21 to 4.28).ConclusionThe prognostic value of the included models varied greatly between the data sources. Although the Knight 4C Mortality Score and Wang clinical model appeared most promising, recalibration (intercept and slope updates) is needed before implementation in routine care.
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  • Lindblad-Toh, Kerstin, et al. (författare)
  • Genome sequence, comparative analysis and haplotype structure of the domestic dog.
  • 2005
  • Ingår i: Nature. - : Springer Science and Business Media LLC. - 1476-4687 .- 0028-0836. ; 438:7069, s. 803-19
  • Tidskriftsartikel (refereegranskat)abstract
    • Here we report a high-quality draft genome sequence of the domestic dog (Canis familiaris), together with a dense map of single nucleotide polymorphisms (SNPs) across breeds. The dog is of particular interest because it provides important evolutionary information and because existing breeds show great phenotypic diversity for morphological, physiological and behavioural traits. We use sequence comparison with the primate and rodent lineages to shed light on the structure and evolution of genomes and genes. Notably, the majority of the most highly conserved non-coding sequences in mammalian genomes are clustered near a small subset of genes with important roles in development. Analysis of SNPs reveals long-range haplotypes across the entire dog genome, and defines the nature of genetic diversity within and across breeds. The current SNP map now makes it possible for genome-wide association studies to identify genes responsible for diseases and traits, with important consequences for human and companion animal health.
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  • Cruz, Jose Almeida, et al. (författare)
  • RNA-Puzzles : A CASP-like evaluation of RNA three-dimensional structure prediction
  • 2012
  • Ingår i: RNA. - : Cold Spring Harbor Laboratory. - 1355-8382 .- 1469-9001. ; 18:4, s. 610-625
  • Tidskriftsartikel (refereegranskat)abstract
    • We report the results of a first, collective, blind experiment in RNA three-dimensional (3D) structure prediction, encompassing three prediction puzzles. The goals are to assess the leading edge of RNA structure prediction techniques; compare existing methods and tools; and evaluate their relative strengths, weaknesses, and limitations in terms of sequence length and structural complexity. The results should give potential users insight into the suitability of available methods for different applications and facilitate efforts in the RNA structure prediction community in ongoing efforts to improve prediction tools. We also report the creation of an automated evaluation pipeline to facilitate the analysis of future RNA structure prediction exercises.
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  • Iacobaeus, E, et al. (författare)
  • Analysis of cerebrospinal fluid and cerebrospinal fluid cells from patients with multiple sclerosis for detection of JC virus DNA
  • 2009
  • Ingår i: Multiple sclerosis (Houndmills, Basingstoke, England). - : SAGE Publications. - 1352-4585 .- 1477-0970. ; 15:1, s. 28-35
  • Tidskriftsartikel (refereegranskat)abstract
    • Objective1) To determine whether JC virus (JCV) DNA was present in the cerebrospinal fluid (CSF) and blood from patients with multiple sclerosis (MS) in comparison with controls and 2) to find out if our clinical material, based on presence of JCV DNA, included any patient at risk for progressive multifocal leukoencephalopathy (PML).MethodsThe prevalence of JCV DNA was analyzed in CSF and plasma from 217 patients with MS, 86 patients with clinically isolated syndrome (CIS), and 212 patients with other neurological diseases (OND). In addition, we analyzed CSF cells, the first report of JCV DNA in CSF cells in a single sample, and peripheral blood cells in a subgroup of MS ( n = 49), CIS ( n = 14) and OND ( n = 53).ResultsA low copy number of JCV DNA was detected in one MS cell free CSF sample and in one MS CSF cell samples. None of these had any signs of PML or developed this disease during follow-up. In addition, two OND plasma samples were JCV DNA positive, whereas all the other samples had no detectable virus.ConclusionA low copy number of JCV DNA may occasionally be observed both in MS and other diseases and may occur as part of the normal biology of JC virus in humans. This study does not support the hypothesis that patients with MS would be at increased risk to develop PML, and consequently screening of CSF as a measurable risk for PML is not useful.
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  • Kohler, Friedbert, et al. (författare)
  • Categorization and recommendations for outcome measures for lower limb absence by an expert panel
  • 2023
  • Ingår i: Prosthetics and Orthotics International. - 0309-3646 .- 1746-1553. ; 47:6, s. 565-574
  • Tidskriftsartikel (refereegranskat)abstract
    • Background: Understanding the psychometric strengths and limitations of outcome measures for use with people with lower limb absence (LLA) is important for selecting measures suited to evaluating patient outcomes, answering clinical and research questions, and informing health care policy. The aim of this project was to review the current psychometric evidence on outcome measures in people with LLA to determine which measures should be included in a stakeholder consensus process. Methods: An expert panel was assembled, and a 3-stage review process was used to categorize outcome measures identified in a systematic literature review into 3 distinct categories (recommended for measures with better than adequate psychometric properties; recommended with qualification; and unable to recommend). Panelists were asked to individually categorize measures based on results of a systematic review of identified measures’ psychometric properties. Each measure’s final categorization was based on $70% agreement by all panelists. Results: No outcome measure attained the $70% consensus threshold needed to achieve a rating of “recommend.” Hence, panelists suggested combining “recommend” and “recommend with qualifications” into a single category of “recommend with qualifications.” Using this approach, consensus was reached for 59 of 60 measures. Consensus could not be reached on 1 outcome measure (socket comfort score). Thirty-six outcome measures were categorized as “unable to recommend” based on available evidence; however, 23 (12 patient-reported measures and 11 performance-based measures) demonstrated adequate psychometric properties in LLA samples and were thus rated as “recommend with qualification” by the expert panel. The panel of experts were able to recommend 23 measures for inclusion in the subsequent stakeholder review. A key strength of this process was bringing together international researchers with extensive experience in developing and/or using LLA outcome measures who could assist in identifying psychometrically sound measures to include in a subsequent stakeholder consensus process. Conclusion: The above categorizations represent the current state of psychometric evidence on outcome measures for people with LLA and hence may change over time as additional research becomes available. The results will be used to achieve wider consensus from clinicians, health policymakers, health clinic managers, researchers, and end users (i.e., individuals with LLA) on outcome measures for the International Society of Prosthetics and Orthotics lower limb Consensus Outcome Measures for Prosthetic and Amputation ServiceS.
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  • Bhadauria, Major, et al. (författare)
  • Accomodating diversity in CMPs with heterogeneous frequencies
  • 2009
  • Ingår i: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). - Berlin, Heidelberg : Springer Berlin Heidelberg. - 1611-3349 .- 0302-9743. - 9783540929895 ; 5409 LNCS, s. 248-262
  • Konferensbidrag (refereegranskat)abstract
    • Shrinking process technologies and growing chip sizes have profound effects on process variation. This leads to Chip Multiprocessors (CMPs) where not all cores operate at maximum frequency. Instead of simply disabling the slower cores or using guard banding (running all at the frequency of the slowest logic block), we investigate keeping them active, and examine performance and power efficiency of using frequency-heterogeneous CMPs on multithreaded workloads. With uniform workload partitioning, one might intuitively expect slower cores to degrade performance. However, with non-uniform workload partitioning, we find that using both low and high frequency cores improves performance and reduces energy consumption over just running faster cores. Thread scheduling and workload partitioning naturally play significant roles in these improvements. We find that using under-performing cores improves performance by 16% on average and saves CPU energy by up to 16% across the NAS and SPEC-OMP benchmarks on a quad-core AMD platform. Workload balancing via dynamic partitioning yields results within 5% of the overall ideal value. Finally, we show feasible methods to determine at run time whether using a heterogeneous configuration is beneficial. We validate our work through evaluation on a real CMP.
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  • Bhadauria, Major, et al. (författare)
  • Understanding parsec performance on contemporary CMPS
  • 2009
  • Ingår i: Proceedings of the 2009 IEEE International Symposium on Workload Characterization, IISWC 2009. - 9781424451562 ; , s. 98-107
  • Konferensbidrag (refereegranskat)abstract
    • PARSEC is a reference application suite used in industry and academia to assess new Chip Multiprocessor (CMP) designs. No investigation to date has profiled PARSEC on real hardware to better understand scaling properties and bottlenecks. This understanding is crucial in guiding future CMP designs for these kinds of emerging workloads. We use hardware performance counters, taking a systems-level approach and varying common architectural parameters: number of out-of-order cores, memory hierarchy configu- rations, number of multiple simultaneous threads, number of memory channels, and processor frequencies. We find these programs to be largely compute-bound, and thus lim- ited by number of cores, micro-architectural resources, and cache-to-cache transfers, rather than by off-chip memory or system bus bandwidth. Half the suite fails to scale lin- early with increasing number of threads, and some applica- tions saturate performance at few threads on all platforms tested. Exploiting thread level parallelism delivers greater payoffs than exploiting instruction level parallelism. To re- duce power and improve performance, we recommend in- creasing the number of arithmetic units per core, increasing support for TLP, and reducing support for ILP.
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  • Chitty, Jessica L., et al. (författare)
  • The Mini-Organo : A rapid high-throughput 3D coculture organotypic assay for oncology screening and drug development
  • 2020
  • Ingår i: Cancer Reports. - : Wiley. - 2573-8348. ; 3:1
  • Tidskriftsartikel (refereegranskat)abstract
    • Background: The use of in vitro cell cultures is a powerful tool for obtaining key insights into the behaviour and response of cells to interventions in normal and disease situations. Unlike in vivo settings, in vitro experiments allow a fine-tuned control of a range of microenvironmental elements independently within an isolated setting. The recent expansion in the use of three-dimensional (3D) in vitro assays has created a number of representative tools to study cell behaviour in a more physiologically 3D relevant microenvironment. Complex 3D in vitro models that can recapitulate human tissue biology are essential for understanding the pathophysiology of disease. Aim: The development of the 3D coculture collagen contraction and invasion assay, the "organotypic assay," has been widely adopted as a powerful approach to bridge the gap between standard two-dimensional tissue culture and in vivo mouse models. In the cancer setting, these assays can then be used to dissect how stromal cells, such as cancer-associated fibroblasts (CAFs), drive extracellular matrix (ECM) remodelling to alter cancer cell behaviour and response to intervention. However, to date, many of the published organotypic protocols are low-throughput, time-consuming (up to several weeks), and work-intensive with often limited scalability. Our aim was to develop a fast, high-throughput, scalable 3D organotypic assay for use in oncology screening and drug development. Methods and results Here, we describe a modified 96-well organotypic assay, the "Mini-Organo," which can be easily completed within 5 days. We demonstrate its application in a wide range of mouse and human cancer biology approaches including evaluation of stromal cell 3D ECM remodelling, 3D cancer cell invasion, and the assessment of efficacy of potential anticancer therapeutic targets. Furthermore, the organotypic assay described is highly amenable to customisation using different cell types under diverse experimental conditions. Conclusions: The Mini-Organo high-throughput 3D organotypic assay allows the rapid screening of potential cancer therapeutics in human and mouse models in a time-efficient manner.
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  • Daelman, Bo, et al. (författare)
  • Frailty and cognitive function in middle-aged and older adults with congenital heart disease
  • 2024
  • Ingår i: Journal of the American College of Cardiology. - : Elsevier. - 0735-1097 .- 1558-3597. ; 83:12, s. 1149-1159
  • Tidskriftsartikel (refereegranskat)abstract
    • Background: Life expectancy of patients with congenital heart disease (CHD) has increased rapidly, resulting in a growing and aging population. Recent studies have shown that older people with CHD have higher morbidity, health care use, and mortality. To maintain longevity and quality of life, understanding their evolving medical and psychosocial challenges is essential.Objectives: The authors describe the frailty and cognitive profile of middle-aged and older adults with CHD to identify predictor variables and to explore the relationship with hospital admissions and outpatient visits.Methods: Using a cross-sectional, multicentric design, we included 814 patients aged ≥40 years from 11 countries. Frailty phenotype was determined using the Fried method. Cognitive function was assessed by the Montreal Cognitive Assessment.Results: In this sample, 52.3% of patients were assessed as robust, 41.9% as prefrail, and 5.8% as frail; 38.8% had cognitive dysfunction. Multinomial regression showed that frailty was associated with older age, female sex, higher physiologic class, and comorbidities. Counterintuitively, patients with mild heart defects were more likely than those with complex lesions to be prefrail. Patients from middle-income countries displayed more prefrailty than those from higher-income countries. Logistic regression demonstrated that cognitive dysfunction was related to older age, comorbidities, and lower country-level income.Conclusions: Approximately one-half of included patients were (pre-)frail, and more than one-third experienced cognitive impairment. Frailty and cognitive dysfunction were identified in patients with mild CHD, indicating that these concerns extend beyond severe CHD. Assessing frailty and cognition routinely could offer valuable insights into this aging population.
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  • Ferrer-Wreder, Laura, et al. (författare)
  • The diversity of sexually active teens : Urban American adolescents' sexual debut predicting risk and protection factors
  • 2010
  • Konferensbidrag (refereegranskat)abstract
    • Later sexual debut has been connected to increased psychosocial strengths (Houlihan et al., 2007). These cross-sectional analyses speak to the need to look not only for risks, but also for strengths in sexually active adolescents. We hypothesized that later sexual debut, even among sexually active teens, would be associated with decreased risk and increased protection in individual and relationship factors. Participants (N=280) were 57% male and predominately 96% Black or African American (Mage = 17) sexually active high school students in an urban setting. The U.S. Substance Abuse and Mental Health Services Administration (SAMHSA) Youth Survey National Substance Abuse, HIV, and Hepatitis Prevention Initiative Cohort 6 Youth Baseline Questionnaire was used as the primary index. This self report survey has established psychometric properties. In this study, scale scores had good (.68-.85) internal reliability. Scale scores and individual items provided indices of adolescents' sexual debut, HIV and hepatitis knowledge, norms related to drug use, perceived harm associated with drug use, perceived control in risk situations, peer risk (i.e., friends' drug use, antisocial behavior, and sexual activity), as well as the youth's perception of family cohesion. Results showed that relative to participants with an early sexual debut, those with a later debut were more likely to disapprove and perceive more risk associated with drug use, report greater control in risk situations, have fewer 'risky' friends, and know more about hepatitis. SEM analyses (AMOS 17.0) showed similar results. All indices pointed towards good model fit. Parameter estimates indicated that later sexual debut was linked to less peer risk, greater disapproval of drugs, and increased hepatitis knowledge. Results across analyses suggested that sexual debut was important to how these adolescents stood on drug related risk and protective factors, their perceptions of friends, and health knowledge.
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  • Hassan, M. U., et al. (författare)
  • Digital Twins for Lighting Analysis : Literature Review, Challenges, and Research Opportunities
  • 2022
  • Ingår i: Proceedings - European Council for Modelling and Simulation, ECMS. - : European Council for Modelling and Simulation. ; , s. 226-235
  • Konferensbidrag (refereegranskat)abstract
    • Light modelling, simulation, and photometric calculations are by now common tasks in the lighting design process. These practices contribute to the definition and comparison of suitable layout arrangements and help predict the impact of lighting devices. Those tasks demand the use of tools to support the simulation of different scenarios, the analyses of their pros and cons according to different criteria (e.g., health and safety, perception, aesthetics, energy consumption, and costs), and decision-making. Digital twins have emerged as relevant technologies to simulate and visualize different “what-if” scenarios associated with physical entities and processes. In this paper, we investigate the state-of-the-art research concerning the use of digital twins for supporting lighting analysis in the urban/outdoor context. We also present and discuss challenges and research opportunities related to the design, implementation, and validation of digital twins in this domain. 
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45.
  • Kovács, K, et al. (författare)
  • Multi-parameter optimization of a loose focusing high flux high-harmonic beamline
  • 2019
  • Ingår i: Journal of Physics B: Atomic, Molecular and Optical Physics. - : IOP Publishing. - 0953-4075 .- 1361-6455. ; 52:5, s. 055402-055402
  • Tidskriftsartikel (refereegranskat)abstract
    • We perform a multi-dimensional parameter scan in the generation of high-order harmonics, with the main purpose to find the macroscopic conditions that optimize the harmonic yield in a specific spectral domain, around 40 eV for this particular case. The scanned parameters are the laser pulse energy, gas pressure, interaction cell position relative to focus and the cell length, while the fixed parameters are chosen to model a loose focusing configuration which is used in many existing laboratories. We performed the simulations with a 3D non-adiabatic model complemented by a detailed analysis of the phase matching mechanisms involved in an efficient harmonic generation. Based on the results we identify a range of parameter combinations that lead to a high yield in the specified spectral domain. The method and results presented here can be the framework for the design and construction of high flux high-order harmonic generation beamlines.
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  • Kühn, Sergei, et al. (författare)
  • The ELI-ALPS facility : The next generation of attosecond sources
  • 2017
  • Ingår i: Journal of Physics B: Atomic, Molecular and Optical Physics. - : IOP Publishing. - 0953-4075 .- 1361-6455. ; 50:13
  • Forskningsöversikt (refereegranskat)abstract
    • This review presents the technological infrastructure that will be available at the Extreme Light Infrastructure Attosecond Light Pulse Source (ELI-ALPS) international facility. ELI-ALPS will offer to the international scientific community ultrashort pulses in the femtosecond and attosecond domain for time-resolved investigations with unprecedented levels of high quality characteristics. The laser sources and the attosecond beamlines available at the facility will make attosecond technology accessible for scientists lacking access to these novel tools. Time-resolved investigation of systems of increasing complexity is envisaged using the end stations that will be provided at the facility.
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47.
  • Leshchenko, V.E., et al. (författare)
  • Relativistic harmonics D-scan for on-target temporal characterization of intense optical pulses
  • 2019
  • Ingår i: Ultrafast Optics 2019. - : SPIE. - 9781510635128 ; , s. 209-212
  • Konferensbidrag (refereegranskat)abstract
    • Accurate knowledge of the on-target pulse intensity is one of key prerequisites for the correct interpretation of high-field experiments due to their high sensitivity to the exact value of the pulse peak intensity caused by the nonlinearity of underlying processes. There are three parameters determining the peak intensity: pulse energy, spatial and temporal energy distribution. While the detection of pulse energy and spatial profile are well established, the unambiguous temporal characterization of intense optical pulses remains a challenge especially at relativistic intensities and a few-cycle pulse duration. We report on the progress in the temporal characterization of intense laser pulses and present the relativistic surface second harmonic generation dispersion scan (RSSHG-D-scan) – a new approach allowing direct on-target temporal characterization of high-energy few-cycle optical pulses at up to relativistic intensities.
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48.
  • Major, B., et al. (författare)
  • Investigation of high harmonic generation using a high-power, 5-fs laser in a loose-focusing geometry
  • 2017
  • Ingår i: 2017 Conference on Lasers and Electro-Optics Europe &amp;  European Quantum Electronics Conference (CLEO/Europe-EQEC). - : IEEE. - 9781509067367
  • Konferensbidrag (refereegranskat)abstract
    • Summary form only given. Since its first observation almost three decades ago high-order harmonic generation (HHG) in gases became a reliable source of extreme ultraviolet (XUV) pulses, which gave the possibility to study electronic processes on their natural timescale [1, 2]. While the main building blocks of the experimental setups for gas HHG are the same in almost all cases, the focusing or medium geometry varies from realization to realization based on, for example, the available laser power [3, 4].In this work we study HHG in a loose focusing geometry by focusing a ~50-mm diameter (FWHM) beam with a mirror of 16-m focal length (f-number ~320). The main subject of this analysis is to compare low pressure - long interaction length (few millibars and tens of centimeters) with high pressure - short medium (hundreds of millibars and a few millimeters) scenarios and understand the underlying reasons for the observed XUV radiation parameters. The experiments are carried out with on target 35 mJ, sub-5 fs, 740 nm central wavelength pulses provided by an optical parametric synthesizer [5], producing high-energy pulses at the 100 eV spectral region [6]. The theoretical analysis is performed by simulation code based on a three-dimensional nonadiabatic model [7,8]. The good agreement between the experimental and simulation data (see Fig. 1) allows us to use the theoretical findings to gain better insight on the exact phase-matching processes providing the observed features. This detailed description is used to draw general conclusions of the high-harmonic generation process.
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49.
  • Major, B., et al. (författare)
  • Macroscopic Optimization of High Harmonic Generation for High Power Laser Pulses
  • 2016
  • Ingår i: High Intensity Lasers and High Field Phenomena, HILAS 2016. - 9781943580095 ; Part F15-HILAS 2016
  • Konferensbidrag (refereegranskat)abstract
    • We study upscaling of gas high harmonic generation, to make efficient use of the ever increasing laser pulse powers. Loose focusing geometries optimizing phasematching are investigated and compared in HHG efficiency to shorter focusing arrangements.
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50.
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