| 1. |
- Popp, David, et al.
(författare)
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Flow-aligned, single-shot fiber diffraction using a femtosecond X-ray free-electron laser
- 2017
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Ingår i: CYTOSKELETON. - : WILEY. - 1949-3584 .- 1949-3592. ; 74:12, s. 472-481
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Tidskriftsartikel (refereegranskat)abstract
- A major goal for X-ray free-electron laser (XFEL) based science is to elucidate structures of biological molecules without the need for crystals. Filament systems may provide some of the first single macromolecular structures elucidated by XFEL radiation, since they contain one-dimensional translational symmetry and thereby occupy the diffraction intensity region between the extremes of crystals and single molecules. Here, we demonstrate flow alignment of as few as 100 filaments (Escherichia coli pili, F-actin, and amyloid fibrils), which when intersected by femtosecond X-ray pulses result in diffraction patterns similar to those obtained from classical fiber diffraction studies. We also determine that F-actin can be flow-aligned to a disorientation of approximately 5 degrees. Using this XFEL-based technique, we determine that gelsolin amyloids are comprised of stacked -strands running perpendicular to the filament axis, and that a range of order from fibrillar to crystalline is discernable for individual -synuclein amyloids.
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| 2. |
- Abel, I, et al.
(författare)
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Overview of the JET results with the ITER-like wall
- 2013
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Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 53:10, s. 104002-
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Tidskriftsartikel (refereegranskat)abstract
- Following the completion in May 2011 of the shutdown for the installation of the beryllium wall and the tungsten divertor, the first set of JET campaigns have addressed the investigation of the retention properties and the development of operational scenarios with the new plasma-facing materials. The large reduction in the carbon content (more than a factor ten) led to a much lower Z(eff) (1.2-1.4) during L- and H-mode plasmas, and radiation during the burn-through phase of the plasma initiation with the consequence that breakdown failures are almost absent. Gas balance experiments have shown that the fuel retention rate with the new wall is substantially reduced with respect to the C wall. The re-establishment of the baseline H-mode and hybrid scenarios compatible with the new wall has required an optimization of the control of metallic impurity sources and heat loads. Stable type-I ELMy H-mode regimes with H-98,H-y2 close to 1 and beta(N) similar to 1.6 have been achieved using gas injection. ELM frequency is a key factor for the control of the metallic impurity accumulation. Pedestal temperatures tend to be lower with the new wall, leading to reduced confinement, but nitrogen seeding restores high pedestal temperatures and confinement. Compared with the carbon wall, major disruptions with the new wall show a lower radiated power and a slower current quench. The higher heat loads on Be wall plasma-facing components due to lower radiation made the routine use of massive gas injection for disruption mitigation essential.
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| 3. |
- Fu, Zheng, et al.
(författare)
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Uncovering the critical soil moisture thresholds of plant water stress for European ecosystems
- 2022
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Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 28:6, s. 2111-2123
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Tidskriftsartikel (refereegranskat)abstract
- Understanding the critical soil moisture (SM) threshold (θcrit) of plant water stress and land surface energy partitioning is a basis to evaluate drought impacts and improve models for predicting future ecosystem condition and climate. Quantifying the θcrit across biomes and climates is challenging because observations of surface energy fluxes and SM remain sparse. Here, we used the latest database of eddy covariance measurements to estimate θcrit across Europe by evaluating evaporative fraction (EF)-SM relationships and investigating the covariance between vapor pressure deficit (VPD) and gross primary production (GPP) during SM dry-down periods. We found that the θcrit and soil matric potential threshold in Europe are 16.5% and −0.7 MPa, respectively. Surface energy partitioning characteristics varied among different vegetation types; EF in savannas had the highest sensitivities to SM in water-limited stage, and the lowest in forests. The sign of the covariance between daily VPD and GPP consistently changed from positive to negative during dry-down across all sites when EF shifted from relatively high to low values. This sign of the covariance changed after longer period of SM decline in forests than in grasslands and savannas. Estimated θcrit from the VPD–GPP covariance method match well with the EF–SM method, showing this covariance method can be used to detect the θcrit. We further found that soil texture dominates the spatial variability of θcrit while shortwave radiation and VPD are the major drivers in determining the spatial pattern of EF sensitivities. Our results highlight for the first time that the sign change of the covariance between daily VPD and GPP can be used as an indicator of how ecosystems transition from energy to SM limitation. We also characterized the corresponding θcrit and its drivers across diverse ecosystems in Europe, an essential variable to improve the representation of water stress in land surface models.
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| 4. |
- Rodriguez, Carolina, et al.
(författare)
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Grain legume-cereal intercropping enhances the use of soil-derived and biologically fixed nitrogen in temperate agroecosystems. A meta-analysis
- 2020
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Ingår i: European Journal of Agronomy. - : Elsevier. - 1161-0301 .- 1873-7331. ; 118
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Tidskriftsartikel (refereegranskat)abstract
- Grain legumes are known for their benefits to deliver ecosystem services on provisioning of protein-rich food and feed, reducing greenhouse gas emissions through the symbiotic nitrogen fixation function and diversification of cropping systems. Intercropping is an agroecological practice in which two or more crop species are grown simultaneously in the same field, thereby maximizing the use of resources to enhance yields in low input systems and the resilience of cropping systems. We quantified the effect of grain legume-cereal intercropping on the use of N resources in temperate agroecosystems, focusing on dinitrogen (N2) fixation and soil-derived nitrogen acquisition using a meta-analysis of 29 field-scale studies. We estimated and compared effects of different intercrop compositions (proportion of each species in the intercrops), fertilization rates, crop species, soil properties, and other management practices on the symbiotic N2 fixation and the acquisition of soil-derived nitrogen by the cereals and grain legumes. The proportion of N derived from N2 fixation was on average 14 % (95 % CI = [11, 16]) higher in intercropped grain legumes (76 %) compared to legume sole crops (66 %). On the other hand, intercropping reduced the amount of N2 fixed (kg ha−1) by about 15 %, when N2 fixation in inter- and sole cropped legumes was expressed at equivalent density by compensating for the sown legume proportion in intercrops relative to their sole crop sowing rate. The results were mainly influenced by the intercrop composition, legumes species and the method used to quantify N2 fixation. Soil-derived nitrogen acquisition in intercropped grain legumes was significantly reduced (−47 %, 95 % CI = [−56, −36]) compared to sole crop legumes, expressed at equivalent density, while the soil N acquired by intercropped cereals was much higher (+61 %, 95 % CI = [24, 108]) than in sole crop cereals. Total soil N acquisition (legume + cereal) was significantly higher in intercrops than in legume sole crops (+25 %, 95 % CI = [1, 54]), while there was no significant difference between intercrops and cereal sole crops. The meta-analysis confirms and highlights that intercropping consistently stimulates complementary N use between legumes and cereals by increasing N2 fixation by grain legumes and increasing soil N acquisition in cereals. Based on the results of this analysis it would be suggested that cropping systems diversification via intercropping can be used for simultaneous production of both cereals and grain legumes, while increasing the use of N-sources and reducing external inputs of N fertilizers, thereby enhancing the sustainability of agriculture.
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| 5. |
- Romanelli, F, et al.
(författare)
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Overview of the JET results
- 2011
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Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 51:9
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Tidskriftsartikel (refereegranskat)abstract
- Since the last IAEA Conference JET has been in operation for one year with a programmatic focus on the qualification of ITER operating scenarios, the consolidation of ITER design choices and preparation for plasma operation with the ITER-like wall presently being installed in JET. Good progress has been achieved, including stationary ELMy H-mode operation at 4.5 MA. The high confinement hybrid scenario has been extended to high triangularity, lower ρ*and to pulse lengths comparable to the resistive time. The steady-state scenario has also been extended to lower ρ*and ν*and optimized to simultaneously achieve, under stationary conditions, ITER-like values of all other relevant normalized parameters. A dedicated helium campaign has allowed key aspects of plasma control and H-mode operation for the ITER non-activated phase to be evaluated. Effective sawtooth control by fast ions has been demonstrated with3He minority ICRH, a scenario with negligible minority current drive. Edge localized mode (ELM) control studies using external n = 1 and n = 2 perturbation fields have found a resonance effect in ELM frequency for specific q95values. Complete ELM suppression has, however, not been observed, even with an edge Chirikov parameter larger than 1. Pellet ELM pacing has been demonstrated and the minimum pellet size needed to trigger an ELM has been estimated. For both natural and mitigated ELMs a broadening of the divertor ELM-wetted area with increasing ELM size has been found. In disruption studies with massive gas injection up to 50% of the thermal energy could be radiated before, and 20% during, the thermal quench. Halo currents could be reduced by 60% and, using argon/deuterium and neon/deuterium gas mixtures, runaway electron generation could be avoided. Most objectives of the ITER-like ICRH antenna have been demonstrated; matching with closely packed straps, ELM resilience, scattering matrix arc detection and operation at high power density (6.2 MW m-2) and antenna strap voltages (42 kV). Coupling measurements are in very good agreement with TOPICA modelling. © 2011 IAEA, Vienna.
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| 6. |
- Su, Yang, et al.
(författare)
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Performances of Machine Learning Algorithms in Predicting the Productivity of Conservation Agriculture at a Global Scale
- 2022
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Ingår i: Frontiers in Environmental Science. - : Frontiers Media SA. - 2296-665X. ; 10
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Tidskriftsartikel (refereegranskat)abstract
- Assessing the productive performance of conservation agriculture (CA) has become a major issue due to growing concerns about global food security and sustainability. Numerous experiments have been conducted to assess the performance of CA under various local conditions, and meta-analysis has become a standard approach in agricultural sector for analysing and summarizing the experimental data. Meta-analysis provides valuable synthetic information based on mean effect size estimation. However, summarizing large amounts of information by way of a single mean effect value is not always satisfactory, especially when considering agricultural practices. Indeed, their impacts on crop yields are often non-linear, and vary widely depending on a number of factors, including soil properties and local climate conditions. To address this issue, here we present a machine learning approach to produce data-driven global maps describing the spatial distribution of the productivity of CA versus conventional tillage (CT). Our objective is to evaluate and compare several machine-learning models for their ability in estimating the productivity of CA systems, and to analyse uncertainty in the model outputs. We consider different usages, including classification, point regression and quantile regression. Our approach covers the comparison of 12 different machine learning algorithms, model training, tuning with cross-validation, testing, and global projection of results. The performances of these algorithms are compared based on a recent global dataset including more than 4,000 pairs of crop yield data for CA vs. CT. We show that random forest has the best performance in classification and regression, while quantile regression forest performs better than quantile neural networks in quantile regression. The best algorithms are used to map crop productivity of CA vs. CT at the global scale, and results reveal that the performance of CA vs. CT is characterized by a strong spatial variability, and that the probability of yield gain with CA is highly dependent on geographical locations. This result demonstrates that our approach is much more informative than simply presenting average effect sizes produced by standard meta-analyses, and paves the way for such probabilistic, spatially-explicit approaches in many other fields of research.
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| 7. |
- Wang, Xuhui, et al.
(författare)
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Global irrigation contribution to wheat and maize yield
- 2021
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 12:1
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Tidskriftsartikel (refereegranskat)abstract
- Irrigation is the largest sector of human water use and an important option for increasing crop production and reducing drought impacts. However, the potential for irrigation to contribute to global crop yields remains uncertain. Here, we quantify this contribution for wheat and maize at global scale by developing a Bayesian framework integrating empirical estimates and gridded global crop models on new maps of the relative difference between attainable rainfed and irrigated yield (ΔY). At global scale, ΔY is 34 ± 9% for wheat and 22 ± 13% for maize, with large spatial differences driven more by patterns of precipitation than that of evaporative demand. Comparing irrigation demands with renewable water supply, we find 30–47% of contemporary rainfed agriculture of wheat and maize cannot achieve yield gap closure utilizing current river discharge, unless more water diversion projects are set in place, putting into question the potential of irrigation to mitigate climate change impacts.
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