| 1. |
- Hudson, Lawrence N, et al.
(författare)
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The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project
- 2017
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Ingår i: Ecology and Evolution. - : John Wiley & Sons. - 2045-7758. ; 7:1, s. 145-188
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Tidskriftsartikel (refereegranskat)abstract
- The PREDICTS project-Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)-has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
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| 2. |
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| 3. |
- Hudson, Lawrence N., et al.
(författare)
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The PREDICTS database : a global database of how local terrestrial biodiversity responds to human impacts
- 2014
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Ingår i: Ecology and Evolution. - : Wiley. - 2045-7758. ; 4:24, s. 4701-4735
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Tidskriftsartikel (refereegranskat)abstract
- Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species' threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that support computation of a range of biodiversity indicators, is necessary to enable better understanding of historical declines and to project - and avert - future declines. We describe and assess a new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database contains measurements taken in 208 (of 814) ecoregions, 13 (of 14) biomes, 25 (of 35) biodiversity hotspots and 16 (of 17) megadiverse countries. The database contains more than 1% of the total number of all species described, and more than 1% of the described species within many taxonomic groups - including flowering plants, gymnosperms, birds, mammals, reptiles, amphibians, beetles, lepidopterans and hymenopterans. The dataset, which is still being added to, is therefore already considerably larger and more representative than those used by previous quantitative models of biodiversity trends and responses. The database is being assembled as part of the PREDICTS project (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems - ). We make site-level summary data available alongside this article. The full database will be publicly available in 2015.
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| 4. |
- Beal, Jacob, et al.
(författare)
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Robust estimation of bacterial cell count from optical density
- 2020
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Ingår i: Communications Biology. - : Springer Science and Business Media LLC. - 2399-3642. ; 3:1
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Tidskriftsartikel (refereegranskat)abstract
- Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data.
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| 5. |
- De Palma, Adriana, et al.
(författare)
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Predicting bee community responses to land-use changes : effects of geographic and taxonomic biases
- 2016
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Ingår i: Scientific Reports. - : Nature Publishing Group. - 2045-2322. ; 6, s. 1-14
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Tidskriftsartikel (refereegranskat)abstract
- Land-use change and intensification threaten bee populations worldwide, imperilling pollination services. Global models are needed to better characterise, project, and mitigate bees' responses to these human impacts. The available data are, however, geographically and taxonomically unrepresentative; most data are from North America and Western Europe, overrepresenting bumblebees and raising concerns that model results may not be generalizable to other regions and taxa. To assess whether the geographic and taxonomic biases of data could undermine effectiveness of models for conservation policy, we have collated from the published literature a global dataset of bee diversity at sites facing land-use change and intensification, and assess whether bee responses to these pressures vary across 11 regions (Western, Northern, Eastern and Southern Europe; North, Central and South America; Australia and New Zealand; South East Asia; Middle and Southern Africa) and between bumblebees and other bees. Our analyses highlight strong regionally-based responses of total abundance, species richness and Simpson's diversity to land use, caused by variation in the sensitivity of species and potentially in the nature of threats. These results suggest that global extrapolation of models based on geographically and taxonomically restricted data may underestimate the true uncertainty, increasing the risk of ecological surprises.
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| 6. |
- Bowman, Jason E., 1967, et al.
(författare)
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Exhibition/Non-exhibition: Stretched Out. A Seminar.
- 2015
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Ingår i: Saturday 27 June 2015 Venue: Inaugural Research Pavilion: Experimentality Venice Bienniale Collateral Programme Sala del Camino.
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Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- Stretched is a three-year long inquiry, instigated by Jason E. Bowman at the Valand Academy at the University of Gothenburg and to be co-researched by Bowman, Julie Crawshaw and Mick Wilson. Its aim is to inquire into what divergent modes and models, constellations and assemblages are perceived as constitutive of artistic practice when generated in, through, for, and by the field of artist-led cultures and how these may inform new knowledge on the curatorial and in particular models of making public the expansions of practice that artist-led cultures generate. This seminar will query this from the multifarious perspectives of other researchers and practitioners who are engaged in investigating the artist-led, instituting, the curatorial, the exhibitionary and the stretching of what may perceived to be artistic practice beyond the sovereignty of ‘art-making’. The aim of this seminar it to interrogate the research question of Stretched from amidst existing and ongoing research and inquiries by others who broadly relate to its knowledge framework. Its objective is to be co-investigative by engaging participants and attendees to probe and worry at its subject to foster further questions through interrogative dialogues that cascade from the presentations. Participants include: Stretched Research Team, Valand Academy, University of Gothenburg: Jason E. Bowman, artist with a curatorial practice. (UK/SE) Dr. Julie Crawshaw, anthropologist. (SE/UK) Dr. Mick Wilson, artist, writer and researcher. (SE) Guests: Professor Andrea Phillips, Goldsmiths, London. (UK) Valerio del Baglivo, curator and doctoral researcher, Middlesex University. (IT/UK) Dr. Emma Coffield, Researcher at the International Centre for Cultural and Heritage Studies, Newcastle University. (UK) Dr. Georgina Jackson, Director of Exhibitions & Publications, Mercer Union, a centre for contemporary art, Toronto. (CN) Megs Morley, Artist and Independent Curator, Para-Institution, (IRL)
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| 7. |
- Døssing, Arne, et al.
(författare)
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UAV-Towed scalar magnetic gradiometry: A case study in relation to iron oxide copper-gold mineralization, Nautanen (Arctic Sweden)
- 2023
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Ingår i: The Leading Edge. - : Society of Exploration Geophysicists. - 1070-485X .- 1938-3789. ; 42:2, s. 103-111
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Tidskriftsartikel (refereegranskat)abstract
- Scalar magnetic surveying using unmanned aerial vehicle (UAV) platforms is slowly gaining momentum within geophysical applications. So far, only a handful of studies have dealt with UAV-Towed scalar field measurements, while even fewer have considered towed scalar difference measurements (or gradients). In this paper, we demonstrate the possibilities and benefits of deploying precisely positioned noise-minimized UAV-Towed scalar transverse horizontal difference (THD) measurements for mineral exploration purposes. UAV-Towed gradiometry bird data are presented from the Nautanen area in northern Sweden and compared with ground magnetic surveys. This area is known for its iron oxide copper-gold mineralizations. The UAV survey spans a total area of 2.5 km2. It was covered using an average line spacing of 30 m and a constant flight altitude above ground level of 30 m. High-quality scalar total-field and THD data were collected with a dynamic noise level of the raw scalar data of about ±0.05 nT. Comparison with the ground magnetic data shows a strong correlation between magnetic anomaly lows and highs across the survey areas. A map with new structural information is presented based on subtle magnetic structures identified in discrete derivatives of the total magnetic intensity anomaly and THD data. Such systems may replace high-quality heliborne systems and reduce costs of the geophysical exploration phase. However, mapping with UAV-Towed systems is not straightforward. With typical UAV flight speeds of only 10-12 m/s, the wind often disturbs the 3D attitude of the bird during flights. Hence, advanced processing is required to obtain the intended gradients. Similar challenges are less important in surveying, where the survey speed often greatly exceeds the wind speed.
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| 8. |
- Genovese, Giulio, et al.
(författare)
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Clonal hematopoiesis and blood-cancer risk inferred from blood DNA sequence.
- 2014
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Ingår i: The New England journal of medicine. - 1533-4406 .- 0028-4793. ; 371:26, s. 2477-87
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Tidskriftsartikel (refereegranskat)abstract
- Cancers arise from multiple acquired mutations, which presumably occur over many years. Early stages in cancer development might be present years before cancers become clinically apparent.
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| 9. |
- Petersen, Jacob Thejll, et al.
(författare)
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An equivalent source method for removal of attitude-induced responses in drone-towed magnetic scalar gradiometry data
- 2022
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Ingår i: Geophysical Journal International. - : Oxford University Press. - 0956-540X .- 1365-246X. ; 232:3, s. 1556-1567
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Tidskriftsartikel (refereegranskat)abstract
- Drone-towed scalar field gradiometry surveys conducted in windy conditions or under self-excited oscillations generate attitude-induced responses that can hinder the geological interpretation. Here, we present a gradiometric equivalent source method (GESM) to remove these attitude-induced responses by interpolating and continuing the measured gradiometry data to new idealized pseudo-sensor positions free of any attitude deviations. In addition, we present transverse horizontal difference (THD) data from a precisely positioned drone-towed horizontal gradiometry survey collected in Nautanen, northern Sweden. Analysing the Nautanen survey's positional data revealed that the gradiometer system exhibited directional-dependent yaw deviations with periods of unpredictable attitude deviations. Based on synthetic THD data created using the Nautanen survey's positional data, these deviations manifest as line-to-line striping and short-wavelength oscillations in the THD maps. Applying GESM to the synthetic THD data removes these attitude-induced THD responses with satisfactory accuracy compared to the true THD values. Furthermore, on the actual THD data collected in Nautanen, applying GESM improved the continuity of anomalies, significantly improving the interpretation of the data. The results suggest that applying GESM to drone-towed gradiometry surveys, given precise attitude information via an onboard GNSS-IMU system, maintains high quality even when surveying in windy conditions or in high-gradient areas. The results suggest that including GESM in the data processing of drone-towed gradiometry surveys, given precise positional information via an onboard GNSS-IMU system, ensures high-quality geological interpretation even in windy conditions or in high-gradient areas.
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| 10. |
- Sutherland, William J., et al.
(författare)
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A Horizon Scan of Global Conservation Issues for 2016
- 2016
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Ingår i: Trends in Ecology & Evolution. - : Elsevier BV. - 0169-5347 .- 1872-8383. ; 31:1, s. 44-53
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Forskningsöversikt (refereegranskat)abstract
- This paper presents the results of our seventh annual horizon scan, in which we aimed to identify issues that could have substantial effects on global biological diversity in the future, but are not currently widely well known or understood within the conservation community. Fifteen issues were identified by a team that included researchers, practitioners, professional horizon scanners, and journalists. The topics include use of managed bees as transporters of biological control agents, artificial superintelligence, electric pulse trawling, testosterone in the aquatic environment, building artificial oceanic islands, and the incorporation of ecological civilization principles into government policies in China.
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