| 1. |
- Slotte, Tanja, et al.
(författare)
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The Capsella rubella genome and the genomic consequences of rapid mating system evolution
- 2013
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Ingår i: Nature Genetics. - : Springer Science and Business Media LLC. - 1061-4036 .- 1546-1718. ; 45:7, s. 831-U165
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Tidskriftsartikel (refereegranskat)abstract
- The shift from outcrossing to selfing is common in flowering plants(1,2), but the genomic consequences and the speed at which they emerge remain poorly understood. An excellent model for understanding the evolution of self fertilization is provided by Capsella rubella, which became self compatible <200,000 years ago. We report a C. rubella reference genome sequence and compare RNA expression and polymorphism patterns between C. rubella and its outcrossing progenitor Capsella grandiflora. We found a clear shift in the expression of genes associated with flowering phenotypes, similar to that seen in Arabidopsis, in which self fertilization evolved about 1 million years ago. Comparisons of the two Capsella species showed evidence of rapid genome-wide relaxation of purifying selection in C. rubella without a concomitant change in transposable element abundance. Overall we document that the transition to selfing may be typified by parallel shifts in gene expression, along with a measurable reduction of purifying selection.
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| 2. |
- Mahanta, C., et al.
(författare)
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Hydrogeochemical controls on mobilization of arsenic in groundwater of a part of Brahmaputra river floodplain, India
- 2015
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Ingår i: Journal of Hydrology: Regional Studies. - : Elsevier BV. - 2214-5818.
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Tidskriftsartikel (refereegranskat)abstract
- Study region: Arsenic enriched groundwater regime within low-industrialized Brahmaputra floodplains in Assam, NE India. Study focus: We examined the origin, distribution and processes of As release by investigating the salient groundwater chemistry and subsurface sedimentological characteristics. Besides collection of groundwater samples from domestic and public water supply wells, sediment samples from boreholes were investigated for textural and colour linkages. New hydrological insights for the region: Arsenic concentrations above the WHO guideline value of 10. μg/L were present in 33 wells and above the previous Indian national drinking standard of 50. μg/L were present in 15 wells. The green-olive colour sediments were more likely to yield As-enriched groundwater. The supersaturation of groundwater with respect to Fe(II) minerals, such as siderite and vivianite, explained the poor correlation between dissolved As and Fe. The result reinforced the phenomenon of reductive dissolution of Fe(III) oxyhydroxides releasing As to groundwater. This study throws light on the processes and mechanisms involved with As release in groundwater. The homogenous floodplain terrain makes the hydrological As imprint unambiguous and the hydrogeological signatures untarnished. Considering the absence of anthropogenic sources in the study area, the conclusions on the nature and causes for As release to groundwater looked dependable although the final contamination at specific subsurface sites would be influenced by advection-dispersion of groundwater flow accompanied by retardation, ion exchange, surface complexation and possible biodegradation.
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