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1.
  • Villa, Luisa L., et al. (författare)
  • Quadrivalent vaccine against human papillomavirus to prevent high-grade cervical lesions
  • 2007
  • Ingår i: New England Journal of Medicine. - 0028-4793 .- 1533-4406. ; 356:19, s. 1915-1927
  • Tidskriftsartikel (refereegranskat)abstract
    • BACKGROUND: Human papillomavirus types 16 (HPV-16) and 18 (HPV-18) cause approximately 70% of cervical cancers worldwide. A phase 3 trial was conducted to evaluate a quadrivalent vaccine against HPV types 6, 11, 16, and 18 (HPV-6/11/16/18) for the prevention of high-grade cervical lesions associated with HPV-16 and HPV-18. METHODS: In this randomized, double-blind trial, we assigned 12,167 women between the ages of 15 and 26 years to receive three doses of either HPV-6/11/16/18 vaccine or placebo, administered at day 1, month 2, and month 6. The primary analysis was performed for a per-protocol susceptible population that included 5305 women in the vaccine group and 5260 in the placebo group who had no virologic evidence of infection with HPV-16 or HPV-18 through 1 month after the third dose (month 7). The primary composite end point was cervical intraepithelial neoplasia grade 2 or 3, adenocarcinoma in situ, or cervical cancer related to HPV-16 or HPV-18. RESULTS: Subjects were followed for an average of 3 years after receiving the first dose of vaccine or placebo. Vaccine efficacy for the prevention of the primary composite end point was 98% (95.89% confidence interval [CI], 86 to 100) in the per-protocol susceptible population and 44% (95% CI, 26 to 58) in an intention-to-treat population of all women who had undergone randomization (those with or without previous infection). The estimated vaccine efficacy against all high-grade cervical lesions, regardless of causal HPV type, in this intention-to-treat population was 17% (95% CI, 1 to 31). CONCLUSIONS: In young women who had not been previously infected with HPV-16 or HPV-18, those in the vaccine group had a significantly lower occurrence of high-grade cervical intraepithelial neoplasia related to HPV-16 or HPV-18 than did those in the placebo group.
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2.
  • Vaivads, Andris, et al. (författare)
  • Turbulence Heating ObserveR - satellite mission proposal
  • 2016
  • Ingår i: JOURNAL OF PLASMA PHYSICS. - 0022-3778. ; 82
  • Tidskriftsartikel (refereegranskat)abstract
    • The Universe is permeated by hot, turbulent, magnetized plasmas. Turbulent plasma is a major constituent of active galactic nuclei, supernova remnants, the intergalactic and interstellar medium, the solar corona, the solar wind and the Earth's magnetosphere, just to mention a few examples. Energy dissipation of turbulent fluctuations plays a key role in plasma heating and energization, yet we still do not understand the underlying physical mechanisms involved. THOR is a mission designed to answer the questions of how turbulent plasma is heated and particles accelerated, how the dissipated energy is partitioned and how dissipation operates in different regimes of turbulence. THOR is a single-spacecraft mission with an orbit tuned to maximize data return from regions in near-Earth space - magnetosheath, shock, foreshock and pristine solar wind - featuring different kinds of turbulence. Here we summarize the THOR proposal submitted on 15 January 2015 to the 'Call for a Medium-size mission opportunity in ESAs Science Programme for a launch in 2025 (M4)'. THOR has been selected by European Space Agency (ESA) for the study phase.
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  • Lehtinen, M, et al. (författare)
  • Ten-year follow-up of human papillomavirus vaccine efficacy against the most stringent cervical neoplasia end-point-registry-based follow-up of three cohorts from randomized trials
  • 2017
  • Ingår i: BMJ open. - : BMJ. - 2044-6055. ; 7:8, s. e015867-
  • Tidskriftsartikel (refereegranskat)abstract
    • Due to long lag time between infection/cancer diagnoses human papillomavirus (HPV) vaccination programs will deliver vaccine efficacy (VE) estimates against cancer end-points late. Cancer registry follow-up of population-based, randomised trial cohorts of vaccinated and unvaccinated women was undertaken for the estimation of VE against cervical intraepithelial neoplasia grade three and invasive cancer (CIN3+).MethodsWe report interim results with 98 561 person years of Finnish Cancer Registry -based follow-up of individually and/or cluster randomised cohorts of HPV-16/18 vaccinated and unvaccinated adolescent women enrolled in June 2003/2005, and between May 2004 and April 2005, respectively. The cohorts comprised 15 627 18- to 19-year-old unvaccinated women (NCT01393470), and 2 401 and 64 16- to 17-year-old HPV-16/18 vaccinated women participating the PATRICIA (NCT00122681) and HPV-012 (NCT00169494) trials, respectively. The age-aligned passive follow-up started 6 months after the clinical trials’ end.ResultsDuring the follow-up of 4.5 to 10 years post enrolment we identified 75 cases of cervical intraepithelial neoplasia grade 3 (CIN3) and 4 cases of invasive cervical cancer (ICC) in the unvaccinated cohort, and 4 CIN3 cases in the HPV-16/18 vaccinated women. Diagnostic blocks were available for HPV typing from 87% of the cases. CIN3+ lesions were detectable in 54 cases. HPV16 was found in 26 of 50 unvaccinated CIN3+ cases, and in 3 CIN3+ cases in the HPV-16/18 vaccinated women. The latter were all baseline positive for cervical HPV16 DNA. Baseline data was not available for the unvaccinated women. Intention-to-treat VE against any CIN3+ was 66% (95% CI 8, 88).ConclusionsTen years post vaccination the AS04-adjuvanted HPV-16/18 vaccine shows continued efficacy against CIN3+ irrespectively of HPV type. Vaccine efficacy was not observed in baseline HPV16 DNA positive subjects.Trial registration numberNCT01393470.
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7.
  • Branduardi-Raymont, G., et al. (författare)
  • Exploring solar-terrestrial interactions via multiple imaging observers
  • 2022
  • Ingår i: Experimental astronomy. - : Springer Nature. - 0922-6435 .- 1572-9508. ; 54:2-3, s. 361-390
  • Tidskriftsartikel (refereegranskat)abstract
    • How does solar wind energy flow through the Earth's magnetosphere, how is it converted and distributed? is the question we want to address. We need to understand how geomagnetic storms and substorms start and grow, not just as a matter of scientific curiosity, but to address a clear and pressing practical problem: space weather, which can influence the performance and reliability of our technological systems, in space and on the ground, and can endanger human life and health. Much knowledge has already been acquired over the past decades, particularly by making use of multiple spacecraft measuring conditions in situ, but the infant stage of space weather forecasting demonstrates that we still have a vast amount of learning to do. A novel global approach is now being taken by a number of space imaging missions which are under development and the first tantalising results of their exploration will be available in the next decade. In this White Paper, submitted to ESA in response to the Voyage 2050 Call, we propose the next step in the quest for a complete understanding of how the Sun controls the Earth's plasma environment: a tomographic imaging approach comprising two spacecraft in highly inclined polar orbits, enabling global imaging of magnetopause and cusps in soft X-rays, of auroral regions in FUV, of plasmasphere and ring current in EUV and ENA (Energetic Neutral Atoms), alongside in situ measurements. Such a mission, encompassing the variety of physical processes determining the conditions of geospace, will be crucial on the way to achieving scientific closure on the question of solar-terrestrial interactions.
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8.
  • Fryer, L. J., et al. (författare)
  • 3D GUMICS Simulations of Northward IMF Magnetotail Structure
  • 2023
  • Ingår i: Journal of Geophysical Research - Space Physics. - : American Geophysical Union (AGU). - 2169-9380 .- 2169-9402. ; 128:8
  • Tidskriftsartikel (refereegranskat)abstract
    • This study presents a re-evaluation of the Kullen and Janhunen (2004, https://doi.org/10.5194/angeo-22-951-2004) global northward interplanetary magnetic field (IMF) simulation, using the Grand Unified Magnetosphere–Ionosphere Coupling Simulation version 4 (GUMICS-4), a global MHD model. We investigate the dynamic coupling between northward IMF conditions and the Earth’s magnetotail and compare the results to observation-based mechanisms for the formation of transpolar arcs. The results of this study reveal that under northward IMF conditions (and northward IMF initialization), a large closed field line region forms in the magnetotail, with similarities to transpolar arc structures observed from spacecraft data. This interpretation is supported by the simultaneous increase of closed flux measured in the magnetotail. However, the reconnection configuration differs in several respects from previously theorized magnetotail structures that have been inferred from both observations and simulations results and associated with transpolar arcs. We observe that dawn–dusk lobe regions form as a result of high-latitude reconnection during the initialization stages, which later come into contact as the change in the IMF By component causes the magnetotail to twist. We conclude that in the GUMICS simulation, transpolar arc-like structures are formed as a result of reconnection in the magnetotail, rather than high-latitude reconnection or due to the mapping of the plasma sheet through a twisted magnetotail as interpreted from previous analysis of GUMICS simulations.
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9.
  • George, H., et al. (författare)
  • Estimating Inner Magnetospheric Radial Diffusion Using a Hybrid-Vlasov Simulation
  • 2022
  • Ingår i: Frontiers in Astronomy and Space Sciences. - : Frontiers Media S.A.. - 2296-987X. ; 9
  • Tidskriftsartikel (refereegranskat)abstract
    • Radial diffusion coefficients quantify non-adiabatic transport of energetic particles by electromagnetic field fluctuations in planetary radiation belts. Theoretically, radial diffusion occurs for an ensemble of particles that experience irreversible violation of their third adiabatic invariant, which is equivalent to a change in their Roederer L* parameter. Thus, the Roederer L* coordinate is the fundamental quantity from which radial diffusion coefficients can be computed. In this study, we present a methodology to calculate the Lagrangian derivative of L* from global magnetospheric simulations, and test it with an application to Vlasiator, a hybrid-Vlasov model of near-Earth space. We use a Hamiltonian formalism for particles confined to closed drift shells with conserved first and second adiabatic invariants to compute changes in the guiding center drift paths due to electric and magnetic field fluctuations. We investigate the feasibility of this methodology by computing the time derivative of L* for an equatorial ultrarelativistic electron population travelling along four guiding center drift paths in the outer radiation belt during a 5 minute portion of a Vlasiator simulation. Radial diffusion in this simulation is primarily driven by ultralow frequency waves in the Pc3 range (10-45 s period range) that are generated in the foreshock and transmitted through the magnetopause to the outer radiation belt environment. Our results show that an alternative methodology to compute detailed radial diffusion transport is now available and could form the basis for comparison studies between numerical and observational measurements of radial transport in the Earth's radiation belts.
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  • Palmroth, Minna, et al. (författare)
  • Lower-thermosphere-ionosphere (LTI) quantities : current status of measuring techniques and models
  • 2021
  • Ingår i: Annales Geophysicae. - : Copernicus Publications. - 0992-7689 .- 1432-0576. ; 39:1, s. 189-237
  • Tidskriftsartikel (refereegranskat)abstract
    • The lower-thermosphere-ionosphere (LTI) system consists of the upper atmosphere and the lower part of the ionosphere and as such comprises a complex system coupled to both the atmosphere below and space above. The atmospheric part of the LTI is dominated by laws of continuum fluid dynamics and chemistry, while the ionosphere is a plasma system controlled by electromagnetic forces driven by the magnetosphere, the solar wind, as well as the wind dynamo. The LTI is hence a domain controlled by many different physical processes. However, systematic in situ measurements within this region are severely lacking, although the LTI is located only 80 to 200 km above the surface of our planet. This paper reviews the current state of the art in measuring the LTI, either in situ or by several different remote-sensing methods. We begin by outlining the open questions within the LTI requiring high-quality in situ measurements, before reviewing directly observable parameters and their most important derivatives. The motivation for this review has arisen from the recent retention of the Daedalus mission as one among three competing mission candidates within the European Space Agency (ESA) Earth Explorer 10 Programme. However, this paper intends to cover the LTI parameters such that it can be used as a background scientific reference for any mission targeting in situ observations of the LTI.
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  • Pulkkinen, T. I., et al. (författare)
  • Magnetospheric modes and solar wind energy coupling efficiency
  • 2010
  • Ingår i: Journal of Geophysical Research. - 0148-0227 .- 2156-2202. ; 115:3, s. A03207-
  • Tidskriftsartikel (refereegranskat)abstract
    • Using observations and two different global MHD simulations, we demonstrate that the solar wind speed controls the magnetospheric response such that the higher the speed, the more dynamic and irregular is the magnetospheric response. For similar level of driving solar wind electric field, the magnetospheric modes can be organized in terms of speed: Low speed produces steady convection events, intermediate speeds result in periodic sawtooth oscillations, and high speeds drive large geomagnetic storms. We show that the control parameter of energy transfer and coupling is the electric field along the large-scale X line. We demonstrate using global MHD simulations that for slowly varying interplanetary magnetic field (IMF), the reconnection line is tilted approximately by an angle theta/2, where theta is the IMF clock angle. Then, for clock angles away from northward, the magnetospheric energy entry and response scale with the electric field along the reconnection line (E-PAR), rather than the traditionally used E-Y. If we define the energy coupling efficiency as response/E-PAR, we can show it to be independent of the IMF clock angle and only weakly dependent on the solar wind dynamic pressure. These results demonstrate the ability of the localized reconnection line to control the energy input through the entire magnetopause.
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14.
  • Turc, L., et al. (författare)
  • Transmission of foreshock waves through Earth's bow shock
  • 2023
  • Ingår i: Nature Physics. - : Springer Nature. - 1745-2473 .- 1745-2481. ; 19:1, s. 78-86
  • Tidskriftsartikel (refereegranskat)abstract
    • The Earth's magnetosphere and its bow shock, which is formed by the interaction of the supersonic solar wind with the terrestrial magnetic field, constitute a rich natural laboratory enabling in situ investigations of universal plasma processes. Under suitable interplanetary magnetic field conditions, a foreshock with intense wave activity forms upstream of the bow shock. So-called 30 s waves, named after their typical period at Earth, are the dominant wave mode in the foreshock and play an important role in modulating the shape of the shock front and affect particle reflection at the shock. These waves are also observed inside the magnetosphere and down to the Earth's surface, but how they are transmitted through the bow shock remains unknown. By combining state-of-the-art global numerical simulations and spacecraft observations, we demonstrate that the interaction of foreshock waves with the shock generates earthward-propagating, fast-mode waves, which reach the magnetosphere. These findings give crucial insight into the interaction of waves with collisionless shocks in general and their impact on the downstream medium.
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15.
  • Alho, M., et al. (författare)
  • Electron Signatures of Reconnection in a Global eVlasiator Simulation
  • 2022
  • Ingår i: Geophysical Research Letters. - : American Geophysical Union (AGU). - 0094-8276 .- 1944-8007. ; 49:14
  • Tidskriftsartikel (refereegranskat)abstract
    • Geospace plasma simulations have progressed toward more realistic descriptions of the solar wind-magnetosphere interaction from magnetohydrodynamic to hybrid ion-kinetic, such as the state-of-the-art Vlasiator model. Despite computational advances, electron scales have been out of reach in a global setting. eVlasiator, a novel Vlasiator submodule, shows for the first time how electromagnetic fields driven by global hybrid-ion kinetics influence electrons, resulting in kinetic signatures. We analyze simulated electron distributions associated with reconnection sites and compare them with Magnetospheric Multiscale (MMS) spacecraft observations. Comparison with MMS shows that key electron features, such as reconnection inflows, heated outflows, flat-top distributions, and bidirectional streaming, are in remarkable agreement. Thus, we show that many reconnection-related features can be reproduced despite strongly truncated electron physics and an ion-scale spatial resolution. Ion-scale dynamics and ion-driven magnetic fields are shown to be significantly responsible for the environment that produces electron dynamics observed by spacecraft in near-Earth plasmas.
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16.
  • Blanco-Cano, Xochitl, et al. (författare)
  • Cavitons and spontaneous hot flow anomalies in a hybrid-Vlasov global magnetospheric simulation
  • 2018
  • Ingår i: Annales Geophysicae. - : COPERNICUS GESELLSCHAFT MBH. - 0992-7689 .- 1432-0576. ; 36:4, s. 1081-1097
  • Tidskriftsartikel (refereegranskat)abstract
    • In this paper we present the first identification of foreshock cavitons and the formation of spontaneous hot flow anomalies (SHFAs) with the Vlasiator global magnetospheric hybrid-Vlasov simulation code. In agreement with previous studies we show that cavitons evolve into SHFAs. In the presented run, this occurs very near the bow shock. We report on SHFAs surviving the shock crossing into the down-stream region and show that the interaction of SHFAs with the bow shock can lead to the formation of a magnetosheath cavity, previously identified in observations and simulations. We report on the first identification of long-term local weakening and erosion of the bow shock, associated with a region of increased foreshock SHFA and caviton formation, and repeated shock crossings by them. We show that SHFAs are linked to an increase in suprathermal particle pitch-angle spreads. The realistic length scales in our simulation allow us to present a statistical study of global caviton and SHFA size distributions, and their comparable size distributions support the theory that SHFAs are formed from cavitons. Virtual spacecraft observations are shown to be in good agreement with observational studies.
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17.
  • Coti, Camille, et al. (författare)
  • Integration of Modern HPC Performance Tools in Vlasiator for Exascale Analysis and Optimization
  • 2024
  • Ingår i: IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), May 27-31, San Francisco, California, USA.. - 9798350364606
  • Konferensbidrag (refereegranskat)abstract
    • Key to the success of developing high-performance applications for present and future heterogeneous supercomputers will be the systematic use of measurement and analysis to understand factors that affect delivered performance in the context of parallelization strategy, heterogeneous programming methodology, data partitioning, and scalable algorithm design. The evolving complexity of future exascale platforms makes it unrealistic for application teams to implement their own tools. Similarly, it is naive to expect available robust performance tools to work effectively out-of-the-box, without integration and specialization in respect to application-specific requirements and knowledge. Vlasiator is a powerful massively parallel code for accurate magnetospheric and solar wind plasma simulations. It is being ported to the LUMI HPC system for advanced modeling of the Earth’s magnetosphere and surrounding solar wind. Building on a preexisting Vlasiator performance API called Phiprof, our work significantly advances the performance measurement and analysis capabilities offered to Vlasiator using the TAU, APEX, and IPM tools. The results presented show in-depth characterization of node-level CPU/GPU and MPI communications performance. We highlight the integration of high-level Phiprof events with detailed performance data to expose opportunities for performance tuning. Our results provide important insights to optimize Vlasiator for the upcoming Exascale machines.
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18.
  • Dubart, M., et al. (författare)
  • Sub-grid modeling of pitch-angle diffusion for ion-scale waves in hybrid-Vlasov simulations with Cartesian velocity space
  • 2022
  • Ingår i: Physics of Plasmas. - : American Institute of Physics (AIP). - 1070-664X .- 1089-7674. ; 29:10
  • Tidskriftsartikel (refereegranskat)abstract
    • Numerical simulations have grown to play a central role in modern sciences over the years. The ever-improving technology of supercomputers has made large and precise models available. However, this accuracy is often limited by the cost of computational resources. Lowering the simulation's spatial resolution in order to conserve resources can lead to key processes being unresolved. We have shown in a previous study how insufficient spatial resolution of the proton cyclotron instability leads to a misrepresentation of ion dynamics in hybrid-Vlasov simulations. This leads to larger than expected temperature anisotropy and loss-cone shaped velocity distribution functions. In this study, we present a sub-grid numerical model to introduce pitch-angle diffusion in a 3D Cartesian velocity space, at a spatial resolution where the relevant wave-particle interactions were previously not correctly resolved. We show that the method is successfully able to isotropize loss-cone shaped velocity distribution functions, and that this method could be applied to simulations in order to save computational resources and still correctly model wave-particle interactions.
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19.
  • Faj, Jennifer, et al. (författare)
  • MPI Performance Analysis in Vlasiator : Unraveling Communication Bottlenecks
  • 2023
  • Ingår i: SC23 Proccedings. - Denver, Colorado, USA.
  • Konferensbidrag (refereegranskat)abstract
    • Vlasiator is a popular and powerful massively parallel code for accurate magnetospheric and solar wind plasma simulations. This work provides an in-depth analysis of Vlasiator, focusing on MPI performance using the Integrated Performance Monitoring (IPM) tool. We show that MPI non-blocking point-to-point communication accounts for most of the communication time. The communication topology shows a large number of MPI messages exchanging data in a six-dimensional grid. We also show that relatively large messages are used in MPI communication, reaching up to 256MB. As a communication-bound application, we found that using OpenMP in Vlasiator is critical for eliminating intra-node communication. Our results provide important insights for optimizing Vlasiator for the upcoming Exascale machines.
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20.
  • Hietala, H., et al. (författare)
  • Supermagnetosonic Jets behind a Collisionless Quasiparallel Shock
  • 2009
  • Ingår i: Physical Review Letters. - 0031-9007 .- 1079-7114. ; 103:24, s. 245001-
  • Tidskriftsartikel (refereegranskat)abstract
    • The downstream region of a collisionless quasiparallel shock is structured containing bulk flows with high kinetic energy density from a previously unidentified source. We present Cluster multispacecraft measurements of this type of supermagnetosonic jet as well as of a weak secondary shock front within the sheath, that allow us to propose the following generation mechanism for the jets: The local curvature variations inherent to quasiparallel shocks can create fast, deflected jets accompanied by density variations in the downstream region. If the speed of the jet is super(magneto)sonic in the reference frame of the obstacle, a second shock front forms in the sheath closer to the obstacle. Our results can be applied to collisionless quasiparallel shocks in many plasma environments.
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21.
  • Hoilijoki, S., et al. (författare)
  • Properties of Magnetic Reconnection and FTEs on the Dayside Magnetopause With and Without Positive IMF Bx Component During Southward IMF
  • 2019
  • Ingår i: Journal of Geophysical Research - Space Physics. - 2169-9380 .- 2169-9402. ; 124:6, s. 4037-4048
  • Tidskriftsartikel (refereegranskat)abstract
    • This paper describes properties and behavior of magnetic reconnection and flux transfer events (FTEs) on the dayside magnetopause using the global hybrid-Vlasov code Vlasiator. We investigate two simulation runs with and without a sunward (positive)B-x component of the interplanetary magnetic field (IMF) when the IMF is southward. The runs are two-dimensional in real space in the noon-midnight meridional (polar) plane and three-dimensional in velocity space. Solar wind input parameters are identical in the two simulations with the exception that the IMF is purely southward in one but tilted 45 degrees toward the Sun in the other. In the purely southward case (i.e., without B-x) the magnitude of the magnetos heath magnetic field component tangential to the magnetopause is larger than in the run with a sunward tilt. This is because the shock normal is perpendicular to the IMF at the equatorial plane, whereas in the other run the shock configuration is oblique and a smaller fraction of the total IMF strength is compressed at the shock crossing. Hence, the measured average and maximum reconnection rate are larger in the purely southward run. The run with tilted IMF also exhibits a north-south asymmetry in the tangential magnetic field caused by the different angle between the IMF and the bow shock normal north and south of the equator. Greater north-south asymmetries are seen in the FTE occurrence rate, size, and velocity as well; FTEs moving toward the Southern Hemisphere are larger in size and observed less frequently than FTEs in the Northern Hemisphere.
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22.
  • Johlander, Andreas, 1990-, et al. (författare)
  • Ion Acceleration Efficiency at the Earth's Bow Shock : Observations and Simulation Results
  • 2021
  • Ingår i: Astrophysical Journal. - : American Astronomical Society. - 0004-637X .- 1538-4357. ; 914:2
  • Tidskriftsartikel (refereegranskat)abstract
    • Collisionless shocks are some of the most efficient particle accelerators in heliospheric and astrophysical plasmas. Here we study and quantify ion acceleration at Earth's bow shock with observations from NASA's Magnetospheric Multiscale (MMS) satellites and in a global hybrid-Vlasov simulation. From the MMS observations, we find that quasiparallel shocks are more efficient at accelerating ions. There, up to 15% of the available energy goes into accelerating ions above 10 times their initial energy. Above a shock-normal angle of similar to 50 degrees, essentially no energetic ions are observed downstream of the shock. We find that ion acceleration efficiency is significantly lower when the shock has a low Mach number (M ( A ) < 6) while there is little Mach number dependence for higher values. We also find that ion acceleration is lower on the flanks of the bow shock than at the subsolar point regardless of the Mach number. The observations show that a higher connection time of an upstream field line leads to somewhat higher acceleration efficiency. To complement the observations, we perform a global hybrid-Vlasov simulation with realistic solar-wind parameters with the shape and size of the bow shock. We find that the ion acceleration efficiency in the simulation shows good quantitative agreement with the MMS observations. With the combined approach of direct spacecraft observations, we quantify ion acceleration in a wide range of shock angles and Mach numbers.
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23.
  • Kajdic, P., et al. (författare)
  • ULF Wave Transmission Across Collisionless Shocks : 2.5D Local Hybrid Simulations
  • 2021
  • Ingår i: Journal of Geophysical Research - Space Physics. - : American Geophysical Union (AGU). - 2169-9380 .- 2169-9402. ; 126:11
  • Tidskriftsartikel (refereegranskat)abstract
    • We study the interaction of upstream ultralow frequency (ULF) waves with collisionless shocks by analyzing the outputs of 11 2D local hybrid simulation runs. Our simulated shocks have Alfvenic Mach numbers between 4.29 and 7.42 and their theta BN angles are 15 degrees, 30 degrees, 45 degrees, and 50 degrees. The ULF wave foreshocks develop upstream of all of them. The wavelength and the amplitude of the upstream waves exhibit a complex dependence on the shock's MA and theta BN. The wavelength positively correlates with both parameters, with the dependence on theta BN being much stronger. The amplitude of the ULF waves is proportional to the product of the reflected beam velocity and density, which also depend on MA and theta BN. The interaction of the ULF waves with the shock causes large-scale (several tens of upstream ion inertial lengths) shock rippling. The properties of the shock ripples are related to the ULF wave properties, namely their wavelength and amplitude. In turn, the ripples have a large impact on the ULF wave transmission across the shock because they change local shock properties (theta BN, strength), so that different sections of the same ULF wavefront encounter shock with different characteristics. Downstream fluctuations do not resemble the upstream waves in terms the wavefront extension, orientation or their wavelength. However, some features are conserved in the Fourier spectra of downstream compressive waves that present a bump or flattening at wavelengths approximately corresponding to those of the upstream ULF waves. In the transverse downstream spectra, these features are weaker.
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24.
  • Kempf, Yann, et al. (författare)
  • Wave dispersion in the hybrid-Vlasov model : Verification of Vlasiator
  • 2013
  • Ingår i: Physics of Plasmas. - : American Institute of Physics (AIP). - 1070-664X .- 1089-7674. ; 20:11
  • Tidskriftsartikel (refereegranskat)abstract
    • Vlasiator is a new hybrid-Vlasov plasma simulation code aimed at simulating the entire magnetosphere of the Earth. The code treats ions (protons) kinetically through Vlasov's equation in the six-dimensional phase space while electrons are a massless charge-neutralizing fluid [M. Palmroth et al., J. Atmos. Sol.-Terr. Phys. 99, 41 (2013); A. Sandroos et al., Parallel Comput. 39, 306 (2013)]. For first global simulations of the magnetosphere, it is critical to verify and validate the model by established methods. Here, as part of the verification of Vlasiator, we characterize the low-beta plasma wave modes described by this model and compare with the solution computed by the Waves in Homogeneous, Anisotropic Multicomponent Plasmas (WHAMP) code [K. Ronnmark, Kiruna Geophysical Institute Reports No. 179, 1982], using dispersion curves and surfaces produced with both programs. The match between the two fundamentally different approaches is excellent in the low-frequency, long wavelength range which is of interest in global magnetospheric simulations. The left-hand and right-hand polarized wave modes as well as the Bernstein modes in the Vlasiator simulations agree well with the WHAMP solutions. Vlasiator allows a direct investigation of the importance of the Hall term by including it in or excluding it from Ohm's law in simulations. This is illustrated showing examples of waves obtained using the ideal Ohm's law and Ohm's law including the Hall term. Our analysis emphasizes the role of the Hall term in Ohm's law in obtaining wave modes departing from ideal magnetohydrodynamics in the hybrid-Vlasov model. 
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25.
  • Kilpua, E. K. J., et al. (författare)
  • Solar Wind Properties and Geospace Impact of Coronal Mass Ejection-Driven Sheath Regions : Variation and Driver Dependence
  • 2019
  • Ingår i: Space Weather. - 1542-7390. ; 17:8, s. 1257-1280
  • Tidskriftsartikel (refereegranskat)abstract
    • We present a statistical study of interplanetary conditions and geospace response to 89 coronal mass ejection-driven sheaths observed during Solar Cycles 23 and 24. We investigate in particular the dependencies on the driver properties and variations across the sheath. We find that the ejecta speed principally controls the sheath geoeffectiveness and shows the highest correlations with sheath parameters, in particular in the region closest to the shock. Sheaths of fast ejecta have on average high solar wind speeds, magnetic (B) field magnitudes, and fluctuations, and they generate efficiently strong out-of-ecliptic fields. Slow-ejecta sheaths are considerably slower and have weaker fields and field fluctuations, and therefore they cause primarily moderate geospace activity. Sheaths of weak and strong B field ejecta have distinct properties, but differences in their geoeffectiveness are less drastic. Sheaths of fast and strong ejecta push the subsolar magnetopause significantly earthward, often even beyond geostationary orbit. Slow-ejecta sheaths also compress the magnetopause significantly due to their large densities that are likely a result of their relatively long propagation times and source near the streamer belt. We find the regions near the shock and ejecta leading edge to be the most geoeffective parts of the sheath. These regions are also associated with the largest B field magnitudes, out-of-ecliptic fields, and field fluctuations as well as largest speeds and densities. The variations, however, depend on driver properties. Forecasting sheath properties is challenging due to their variable nature, but the dependence on ejecta properties determined in this work could help to estimate sheath geoeffectiveness through remote-sensing coronal mass ejection observations.
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26.
  • Lehtinen, Matti, et al. (författare)
  • Human papillomavirus vaccine efficacy against invasive, HPV-positive cancers : Population-based follow-up of a cluster-randomised trial
  • 2021
  • Ingår i: BMJ Open. - : BMJ. - 2044-6055. ; 11:12
  • Tidskriftsartikel (refereegranskat)abstract
    • Background Human papillomavirus (HPV) vaccination protects against HPV, a necessary risk factor for cervical cancer. We now report results from population-based follow-up of randomised cohorts that vaccination provides HPV-type-specific protection against invasive cancer. Methods Individually and/or cluster randomised cohorts of HPV-vaccinated and non-vaccinated women were enrolled in 2002-2005. HPV vaccine cohorts comprised originally 16-17 year-old HPV 16/18-vaccinated PATRICIA (NCT00122681) and 012 trial (NCT00169494) participants (2465) and HPV6/11/16/18-vaccinated FUTURE II (NCT00092534) participants (866). Altogether, 3341 vaccines were followed by the Finnish Cancer Registry in the same way as 16 526 non-HPV-vaccinated controls. The control cohort stemmed from 15 665 originally 18-19 years-old women enrolled in 2003 (6499) or 2005 (9166) and 861 placebo recipients of the FUTURE II trial. The follow-up started 6 months after the clinical trials in 2007 and 2009 and ended in 2019. It was age aligned for the cohorts. Findings During a follow-up time of up to 11 years, we identified 17 HPV-positive invasive cancer cases (14 cervical cancers, 1 vaginal cancer, 1 vulvar cancer and 1 tongue cancer) in the non-HPV-vaccinated cohorts and no cases in the HPV-vaccinated cohorts. HPV typing of diagnostic tumour blocks found HPV16 in nine cervical cancer cases, HPV18, HPV33 and HPV52 each in two cases and HPV45 in one cervical cancer case. The vaginal, vulvar and tongue cancer cases were, respectively, positive for HPV16, HPV52/66 and HPV213. Intention-to-treat vaccine efficacy against all HPV-positive cancers was 100% (95% CI 2 to 100, p<0.05). Interpretation Vaccination is effective against invasive HPV-positive cancer. Trial registration number NCT00122681, Post-results; NCT00169494, Post-results; NCT00092534, Post-results.
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27.
  • Palin, Laurianne, et al. (författare)
  • Modulation of the substorm current wedge by bursty bulk flows : 8 September 2002- Revisited
  • 2016
  • Ingår i: Journal of Geophysical Research - Space Physics. - 2169-9380 .- 2169-9402. ; 121:5, s. 4466-4482
  • Tidskriftsartikel (refereegranskat)abstract
    • The ultimate formation mechanism of the substorm current wedge (SCW) remains to date unclear. In this study, we investigate its relationship to plasma flows at substorm onset and throughout the following expansion phase. We revisit the case of 8 September 2002, which has been defined as one of the best textbook examples of a substorm because of its excellent coverage by both spacecraft in the magnetotail and ground-based observatories. We found that a dense sequence of arrival of nightside flux transfer events (NFTEs; which can be understood as the lobe magnetic signature due to a bursty bulk flow travelling earthward in the central plasma sheet) in the near-Earth tail leads to a modulation (and further step-like builtup) of the SCW intensity during the substorm expansion phase. In addition, we found that small SCWs are created also during the growth phase of the event in association with another less intense sequence of NFTEs. The differences between the sequence of NFTEs in the growth and expansion phase are discussed. We conclude that the envelope of the magnetic disturbances which we typically refer to as an intense magnetic substorm is the result of a group or sequence of more intense and more frequent NFTEs.
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28.
  • Sarris, Theodore E., et al. (författare)
  • Daedalus MASE (mission assessment through simulation exercise): A toolset for analysis of in situ missions and for processing global circulation model outputs in the lower thermosphere-ionosphere
  • 2023
  • Ingår i: Frontiers in Astronomy and Space Sciences. - : Frontiers Media SA. - 2296-987X. ; 9
  • Tidskriftsartikel (refereegranskat)abstract
    • Daedalus MASE (Mission Assessment through Simulation Exercise) is an open-source package of scientific analysis tools aimed at research in the Lower Thermosphere-Ionosphere (LTI). It was created with the purpose to assess the performance and demonstrate closure of the mission objectives of Daedalus, a mission concept targeting to perform in-situ measurements in the LTI. However, through its successful usage as a mission-simulator toolset, Daedalus MASE has evolved to encompass numerous capabilities related to LTI science and modeling. Inputs are geophysical observables in the LTI, which can be obtained either through in-situ measurements from spacecraft and rockets, or through Global Circulation Models (GCM). These include ion, neutral and electron densities, ion and neutral composition, ion, electron and neutral temperatures, ion drifts, neutral winds, electric field, and magnetic field. In the examples presented, these geophysical observables are obtained through NCAR’s Thermosphere-Ionosphere-Electrodynamics General Circulation Model. Capabilities of Daedalus MASE include: 1) Calculations of products that are derived from the above geophysical observables, such as Joule heating, energy transfer rates between species, electrical currents, electrical conductivity, ion-neutral collision frequencies between all combinations of species, as well as height-integrations of derived products. 2) Calculation and cross-comparison of collision frequencies and estimates of the effect of using different models of collision frequencies into derived products. 3) Calculation of the uncertainties of derived products based on the uncertainties of the geophysical observables, due to instrument errors or to uncertainties in measurement techniques. 4) Routines for the along-orbit interpolation within gridded datasets of GCMs. 5) Routines for the calculation of the global coverage of an in situ mission in regions of interest and for various conditions of solar and geomagnetic activity. 6) Calculations of the statistical significance of obtaining the primary and derived products throughout an in situ mission’s lifetime. 7) Routines for the visualization of 3D datasets of GCMs and of measurements along orbit. Daedalus MASE code is accompanied by a set of Jupyter Notebooks, incorporating all required theory, references, codes and plotting in a user-friendly environment. Daedalus MASE is developed and maintained at the Department for Electrical and Computer Engineering of the Democritus University of Thrace, with key contributions from several partner institutions.
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29.
  • Sarris, Theodoros, et al. (författare)
  • Plasma-neutral interactions in the lower thermosphere-ionosphere : The need for in situ measurements to address focused questions
  • 2023
  • Ingår i: Frontiers in Astronomy and Space Sciences. - : Frontiers Media SA. - 2296-987X. ; 9
  • Forskningsöversikt (refereegranskat)abstract
    • The lower thermosphere-ionosphere (LTI) is a key transition region between Earth's atmosphere and space. Interactions between ions and neutrals maximize within the LTI and in particular at altitudes from 100 to 200 km, which is the least visited region of the near-Earth environment. The lack of in situ co-temporal and co-spatial measurements of all relevant parameters and their elusiveness to most remote-sensing methods means that the complex interactions between its neutral and charged constituents remain poorly characterized to this date. This lack of measurements, together with the ambiguity in the quantification of key processes in the 100-200 km altitude range affect current modeling efforts to expand atmospheric models upward to include the LTI and limit current space weather prediction capabilities. We present focused questions in the LTI that are related to the complex interactions between its neutral and charged constituents. These questions concern core physical processes that govern the energetics, dynamics, and chemistry of the LTI and need to be addressed as fundamental and long-standing questions in this critically unexplored boundary region. We also outline the range of in situ measurements that are needed to unambiguously quantify key LTI processes within this region, and present elements of an in situ concept based on past proposed mission concepts.
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30.
  • Suni, J., et al. (författare)
  • Connection Between Foreshock Structures and the Generation of Magnetosheath Jets : Vlasiator Results
  • 2021
  • Ingår i: Geophysical Research Letters. - : American Geophysical Union (AGU). - 0094-8276 .- 1944-8007. ; 48:20
  • Tidskriftsartikel (refereegranskat)abstract
    • Earth's magnetosheath consists of shocked solar wind plasma that has been compressed and slowed down at the Earth's bow shock. Magnetosheath jets are pulses of enhanced dynamic pressure in the magnetosheath. Jets have been observed by numerous spacecraft missions, but their origin has remained unconfirmed, though several formation mechanisms have been suggested. In this study, we use a method for automatically identifying and tracking jets as well as foreshock compressive structures (FCSs) in four 2D runs of the global hybrid-Vlasov simulation Vlasiator. We find that up to 75% of magnetosheath jets are caused by FCSs impacting the bow shock. These jets propagate deeper into the magnetosheath than the remaining 25% of jets that are not caused by FCSs. We conduct a visual case study of one jet that was not caused by FCSs and find that the bow shock was not rippled before the formation of the jet. Plain Language Summary The space around Earth is filled with plasma, the fourth state of matter. Earth's magnetic field shields our planet from the stream of plasma coming from the Sun, the solar wind. The solar wind plasma is slowed down at the Earth's bow shock, before it flows against and around the Earth's magnetic field in the magnetosheath. Sometimes, pulses of high density or velocity can occur in the magnetosheath that have the potential to disturb the inner regions of near-Earth space where many spacecraft orbit. We call these pulses magnetosheath jets. Magnetosheath jets have been observed by many spacecraft over the past few decades, but how they form has remained unclear. In this study, we use the Vlasiator model to simulate plasma in near-Earth space and investigate the origins of magnetosheath jets. We find that the formation of up to 75% of these jets can be explained by compressive structures in the foreshock, a region populated by intense wave activity extending sunward of the quasi-parallel bow shock, where interplanetary magnetic field lines allow shock-reflected particles to travel back toward the Sun. Key Points We investigated magnetosheath jets in four hybrid-Vlasov simulation runs with different solar wind parameters Foreshock compressive structures can explain the formation of up to 75% of magnetosheath jets The foreshock compressive structure-caused jets travel deeper into the magnetosheath than the 25% of the jets whose origins remain unclear
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