| 1. |
- Anderson, D. C., et al.
(författare)
-
Formaldehyde in the Tropical Western Pacific: Chemical Sources and Sinks, Convective Transport, and Representation in CAM-Chem and the CCMI Models
- 2017
-
Ingår i: Journal of Geophysical Research-Atmospheres. - : American Geophysical Union (AGU). - 2169-897X. ; 122:20, s. 11201-11226
-
Tidskriftsartikel (refereegranskat)abstract
- Formaldehyde (HCHO) directly affects the atmospheric oxidative capacity through its effects on HOx. In remote marine environments, such as the tropical western Pacific (TWP), it is particularly important to understand the processes controlling the abundance of HCHO because model output from these regions is used to correct satellite retrievals of HCHO. Here we have used observations from the Convective Transport of Active Species in the Tropics (CONTRAST) field campaign, conducted during January and February 2014, to evaluate our understanding of the processes controlling the distribution of HCHO in the TWP as well as its representation in chemical transport/climate models. Observed HCHO mixing ratios varied from similar to 500 parts per trillion by volume (pptv) near the surface to similar to 75 pptv in the upper troposphere. Recent convective transport of near surface HCHO and its precursors, acetaldehyde and possibly methyl hydroperoxide, increased upper tropospheric HCHO mixing ratios by similar to 33% (22 pptv); this air contained roughly 60% less NO than more aged air. Output from the CAM-Chem chemistry transport model (2014 meteorology) as well as nine chemistry climate models from the Chemistry-Climate Model Initiative (free-running meteorology) are found to uniformly underestimate HCHO columns derived from in situ observations by between 4 and 50%. This underestimate of HCHO likely results from a near factor of two underestimate of NO in most models, which strongly suggests errors in NOx emissions inventories and/or in the model chemical mechanisms. Likewise, the lack of oceanic acetaldehyde emissions and potential errors in the model acetaldehyde chemistry lead to additional underestimates in modeled HCHO of up to 75 pptv (similar to 15%) in the lower troposphere.
|
|
| 2. |
- Austin, John, et al.
(författare)
-
Chemistry-climate model simulations of spring Antarctic ozone
- 2010
-
Ingår i: Journal of Geophysical Research. - 0148-0227 .- 2156-2202. ; 115, s. D00M11-
-
Tidskriftsartikel (refereegranskat)abstract
- Coupled chemistry-climate model simulations covering the recent past and continuing throughout the 21st century have been completed with a range of different models. Common forcings are used for the halogen amounts and greenhouse gas concentrations, as expected under the Montreal Protocol (with amendments) and Intergovernmental Panel on Climate Change A1b Scenario. The simulations of the Antarctic ozone hole are compared using commonly used diagnostics: the minimum ozone, the maximum area of ozone below 220 DU, and the ozone mass deficit below 220 DU. Despite the fact that the processes responsible for ozone depletion are reasonably well understood, a wide range of results is obtained. Comparisons with observations indicate that one of the reasons for the model underprediction in ozone hole area is the tendency for models to underpredict, by up to 35%, the area of low temperatures responsible for polar stratospheric cloud formation. Models also typically have species gradients that are too weak at the edge of the polar vortex, suggesting that there is too much mixing of air across the vortex edge. Other models show a high bias in total column ozone which restricts the size of the ozone hole (defined by a 220 DU threshold). The results of those models which agree best with observations are examined in more detail. For several models the ozone hole does not disappear this century but a small ozone hole of up to three million square kilometers continues to occur in most springs even after 2070.
|
|
| 3. |
- Rajkumar, T, et al.
(författare)
-
Carcinoma of the cervix and tobacco smoking: Collaborative reanalysis of individual data on 13,541 women with carcinoma of the cervix and 23,017 women without carcinoma of the cervix from 23 epidemiological studies - International collaboration of epidemiological studies of cervical cancer
- 2006
-
Ingår i: International Journal of Cancer. - : Wiley. - 0020-7136. ; 118:6, s. 1481-1495
-
Tidskriftsartikel (refereegranskat)abstract
- Tobacco smoking has been classified as a cause of cervical cancer, but the effect of different patterns of smoking on risk is unclear. The International Collaboration of Epidemiological Studies of Cervical Cancer has brought together and combined individual data on 13,541 women with and 23,017 women without cervical carcinoma, from 23 epidemiological studies. Relative risks (RRs) and 95% confidence intervals (CIs) of carcinoma of the cervix in relation to tobacco smoking were calculated with stratification by study, age, sexual partners, age at first intercourse, oral contraceptive use and parity. Current smokers had a significantly increased risk of squamous cell carcinoma of the cervix compared to never smokers (RR = 1.60 (95% CI: 1.48-1.73), p < 0.001). There was increased risk for past smokers also, though to a lesser extent (RR = 1.12 (1.01-1.25)), and there was no clear trend with time since stopping smoking (p-trend = 0.6). There was no association between smoking and adenocarcinoma of the cervix (RR = 0.89 (0.74-1.06) and 0.89 (0.72-1.10) for current and past smokers respectively), and the differences between the RRs for smoking and squamous cell and adenocarcinoma were statistically significant (current smoking p < 0.001 and past smoking p = 0.01). In current smokers, the RR of squamous cell carcinoma increased with increasing number of cigarettes smoked per day and also with younger age at starting smoking (p < 0.001 for each trend), but not with duration of smoking (p-trend = 0.3). Eight of the studies had tested women for cervical HPV-DNA, and in analyses restricted to women who tested positive, there was a significantly increased risk in current compared to never smokers for squamous cell carcinoma (RR = 1.95 (1.43-2.65)), but not for adenocarcinoma (RR = 1.06 (0.14-7.96)). In summary, smokers are at an increased risk of squamous cell but not of adenocarcinoma of the cervix. The risk of squamous cell carcinoma increases in current smokers with the number of cigarettes smoked per day and with younger age at starting smoking.
|
|
| 4. |
- Syme, D. B., et al.
(författare)
-
Fusion yield measurements on JET and their calibration
- 2014
-
Ingår i: Fusion engineering and design. - : Elsevier BV. - 0920-3796 .- 1873-7196. ; 89:11, s. 2766-2775
-
Tidskriftsartikel (refereegranskat)abstract
- The power output of fusion experiments and fusion reactor-like devices is measured in terms of the neutron yields which relate directly to the fusion yield. In this paper we describe the devices and methods used to make the new in situ calibration of JET in April 2013 and its early results. The target accuracy of this calibration was 10%, just as in the earlier JET calibration and as required for ITER, where a precise neutron yield measurement is important, e.g., for tritium accountancy. We discuss the constraints and early decisions which defined the main calibration approach, e.g., the choice of source type and the deployment method. We describe the physics, source issues, safety and engineering aspects required to calibrate directly the Fission Chambers and the Activation System which carry the JET neutron calibration. In particular a direct calibration of the Activation system was planned for the first time in JET. We used the existing JET remote-handling system to deploy the Cf-252 source and developed the compatible tooling and systems necessary to ensure safe and efficient deployment in these cases. The scientific programme has sought to better understand the limitations of the calibration, to optimise the measurements and other provisions, to provide corrections for perturbing factors (e.g., presence of the remote-handling boom and other non-standard torus conditions) and to ensure personnel safety and safe working conditions. Much of this work has been based on an extensive programme of Monte-Carlo calculations which, e.g., revealed a potential contribution to the neutron yield via a direct line of sight through the ports which presents individually depending on the details of the port geometry.
|
|
| 5. |
- Tajkumar, T, et al.
(författare)
-
Cervical carcinoma and sexual behavior: collaborative reanalysis of individual data on 15,461 women with cervical carcinoma and 29,164 women without cervical carcinoma from 21 epidemiological studies
- 2009
-
Ingår i: Cancer Epidemiology Biomarkers & Prevention. - 1538-7755. ; 18:4, s. 1060-1069
-
Tidskriftsartikel (refereegranskat)abstract
- High-risk human papillomavirus (HPV) types cause most cervical carcinomas and are sexually transmitted. Sexual behavior therefore affects HPV exposure and its cancer sequelae. The International Collaboration of Epidemiological Studies of Cervical Cancer has combined data on lifetime number of sexual partners and age at first sexual intercourse from 21 studies, or groups of studies, including 10,773 women with invasive cervical carcinoma, 4,688 women with cervical intraepithelial neoplasia grade 3 (CIN3)/carcinoma in situ, and 29,164 women without cervical carcinoma. Relative risks for invasive cancer and CIN3 were estimated by conditional logistic regression. Risk of invasive cervical carcinoma increased with lifetime number of sexual partners (P for linear trend <0.001). The relative risk for > or =6 versus 1 partner, conditioned on age, study, and age at first intercourse, was 2.27 [95% confidence interval (95% CI), 1.98-2.61] and increased to 2.78 (95% CI, 2.22-3.47) after additional conditioning on reproductive factors. The risk of invasive cervical carcinoma increased with earlier age at first intercourse (P for linear trend <0.001). The relative risk for age at first intercourse < or =14 versus > or =25 years, conditioned on age, study, and lifetime number of sexual partners was 3.52 (95% CI, 3.04-4.08), which decreased to 2.05 (95% CI, 1.54-2.73) after additional conditioning on reproductive factors. CIN3/carcinoma in situ showed a similar association with lifetime number of sexual partners; however, the association with age at first intercourse was weaker than for invasive carcinoma. Results should be interpreted with caution given the strong correlation between sexual and reproductive factors and the limited information on HPV status.
|
|
| 6. |
- Johnston, B. C., et al.
(författare)
-
Microbial Preparations (Probiotics) for the Prevention of Clostridium difficile Infection in Adults and Children: An Individual Patient Data Meta-analysis of 6,851 Participants
- 2018
-
Ingår i: Infection Control and Hospital Epidemiology. - : Cambridge University Press (CUP). - 0899-823X .- 1559-6834. ; 39:7, s. 771-781
-
Tidskriftsartikel (refereegranskat)abstract
- OBJECTIVE. To determine whether probiotic prophylaxes reduce the odds of Clostridium difficile infection (CDI) in adults and children. DESIGN. Individual participant data (IPD) meta-analysis of randomized controlled trials (RCTs), adjusting for risk factors. METHODS. We searched 6 databases and 11 grey literature sources from inception to April 2016. We identified 32 RCTs (n=8,713); among them, 18 RCTs provided IPD (n=6,851 participants) comparing probiotic prophylaxis to placebo or no treatment (standard care). One reviewer prepared the IPD, and 2 reviewers extracted data, rated study quality, and graded evidence quality. RESULTS. Probiotics reduced CDI odds in the unadjusted model (n=6,645; odds ratio [OR] 0.37; 95% confidence interval [CI], 0.25-0.55) and the adjusted model (n=5,074; OR, 0.35; 95% CI, 0.23-0.55). Using 2 or more antibiotics increased the odds of CDI (OR, 2.20; 95% CI, 1.11-4.37), whereas age, sex, hospitalization status, and high-risk antibiotic exposure did not. Adjusted subgroup analyses suggested that, compared to no probiotics, multispecies probiotics were more beneficial than single-species probiotics, as was using probiotics in clinical settings where the CDI risk is 5%. Of 18 studies, 14 reported adverse events. In 11 of these 14 studies, the adverse events were retained in the adjusted model. Odds for serious adverse events were similar for both groups in the unadjusted analyses (n=4,990; OR, 1.06; 95% CI, 0.89-1.26) and adjusted analyses (n=4,718; OR, 1.06; 95% CI, 0.89-1.28). Missing outcome data for CDI ranged from 0% to 25.8%. Our analyses were robust to a sensitivity analysis for missingness. CONCLUSIONS. Moderate quality (ie, certainty) evidence suggests that probiotic prophylaxis may be a useful and safe CDI prevention strategy, particularly among participants taking 2 or more antibiotics and in hospital settings where the risk of CDI is >= 5%.
|
|
| 7. |
|
|
| 8. |
|
|
| 9. |
|
|
| 10. |
- Devito, C, et al.
(författare)
-
Cross-Clade HIV-1-Specific Neutralizing IgA in Mucosal and Systemic Compartments of HIV-1-Exposed, Persistently Seronegative Subjects
- 2002
-
Ingår i: Journal of Acquired Immune Deficiency Syndromes. - : Lippincott Williams & Wilkins. - 1525-4135 .- 1944-7884. ; 30:4, s. 413-420
-
Tidskriftsartikel (refereegranskat)abstract
- There is an urgent need for a universally effective HIV-1 vaccine, but whether a vaccine will be able to protect against HIV-1 of different clades is a significant concern. IgA from HIV-1-exposed, persistently seronegative (HEPS) subjects has been shown to neutralize HIV-1 and to block epithelial HIV-1 transcytosis, and it may target novel HIV-1 epitopes. We have tested the ability of plasma and mucosal IgA purified from HEPS subjects to neutralize HIV-1 primary isolates of different viral clades and phenotypes. IgA from two groups of HEPS subjects was tested: sex workers from Nairobi, Kenya, where clades A and D predominate, and the heterosexual partners of individuals infected by clade B virus. HIV-1-infected and low-risk uninfected individuals were included as controls. IgA purified from the blood, genital tract, and saliva of most HEPS sex workers demonstrated significant crossclade HIV-1 neutralization, whereas a more clade-restricted pattern of neutralization was found in partners of clade B-infected individuals. IgA purified from HIV-1-infected individuals also mediated cross-clade neutralization, whereas IgA from uninfected controls lacked neutralizing activity. In conclusion, mucosal and plasma IgA from HEPS subjects neutralizes HIV-1 of different clades. This ability to induce HIV-1-specific systemic and mucosal IgA may be an important feature of an effective prophylactic HIV-1 vaccine.
|
|
| 11. |
|
|
| 12. |
|
|
| 13. |
|
|
| 14. |
- Jeremy, Kris P., et al.
(författare)
-
4.1R-deficient human red blood cells have altered phosphatidylserine exposure pathways and are deficient in CD44 and CD47 glycoproteins
- 2009
-
Ingår i: Haematologica. - : Ferrata Storti Foundation (Haematologica). - 1592-8721 .- 0390-6078. ; 94:10, s. 1354-1361
-
Tidskriftsartikel (refereegranskat)abstract
- Background Protein 4.1R is an important component of die red cell membrane skeleton. It imparts structural integrity and has transmembrane signaling roles by direct interactions with transmembrane proteins and other membrane skeletal components, notably p55 and calmodulin. Design and Methods Spontaneous and ligation-induced phosphatidylserine exposure on erythrocytes from two patients with 4.1R deficiency were studied, using CD47 glycoprotein and glycophorin C as ligands We also looked for protein abnormalities in the 4.1R - based multiprotein complex. Results Phosphatidylserine exposure was significantly increased in 4.1R-deficient erythrocytes obtained from the two different individuals when ligands to CD47 glycoprotein were bound. Spontaneous phosphatidylserine exposure was normal. 4.1R, glycophorin C and p55 were missing or sharply reduced. Furthermore there was an alteration or deficiency of CD47 glycoprotein and a lack of CD44 glycoprotein. Based on a recent study in 4.1R-deficient mice, we found that there are clear functional differences between interactions of human red cell 4.1R and its murine counterpart Conclusions Glycophorin C is known to bind 4.1R, and we have defined previously that it also binds CD47 From our evidence, we suggest that 4.1R plays a role in the phosphatidylserine exposure signaling pathway that is of Fundamental importance in red cell turnover The linkage of CD44 to 4.1R may be relevant to this process
|
|
| 15. |
- Le Toan, T., et al.
(författare)
-
The BIOMASS mission: Mapping global forest biomass to better understand the terrestrial carbon cycle
- 2011
-
Ingår i: Remote Sensing of Environment. - : Elsevier BV. - 0034-4257. ; 115, s. 2850-2860
-
Tidskriftsartikel (refereegranskat)abstract
- In response to the urgent need for improved mapping of global biomass and the lack of any current spacesystems capable of addressing this need, the BIOMASS mission was proposed to the European Space Agency forthe third cycle of Earth Explorer Core missions and was selected for Feasibility Study (Phase A) in March 2009.The objectives of the mission are 1) to quantify the magnitude and distribution of forest biomass globally toimprove resource assessment, carbon accounting and carbon models, and 2) tomonitor and quantify changesin terrestrial forest biomass globally, on an annual basis or better, leading to improved estimates of terrestrialcarbon sources (primarily from deforestation); and terrestrial carbon sinks due to forest regrowth andafforestation. These science objectives require the mission to measure above-ground forest biomass from 70° Nto 56° S at spatial scale of 100–200 m, with error not exceeding ±20% or ±10 t ha−1 and forest height witherror of ±4 m. To meet the measurement requirements, the mission will carry a P-Band polarimetric SAR(centre frequency 435 MHz with 6 MHz bandwidth) with interferometric capability, operating in a dawn-duskorbit with a constant incidence angle (in the range of 25°–35°) and a 25–45 day repeat cycle. During its 5-yearlifetime, the mission will be capable of providing both direct measurements of biomass derived from intensitydata and measurements of forest height derived from polarimetric interferometry. The design of the BIOMASSmission spins together two main observational strands: (1) the long heritage of airborne observations intropical, temperate and boreal forest that have demonstrated the capabilities of P-band SAR for measuringforest biomass; (2) new developments in recovery of forest structure including forest height from Pol-InSAR,and, crucially, the resistance of P-band to temporal decorrelation, which makes this frequency uniquelysuitable for biomass measurements with a single repeat-pass satellite. These two complementarymeasurement approaches are combined in the single BIOMASS sensor, and have the satisfying property thatincreasing biomass reduces the sensitivity of the former approach while increasing the sensitivity of the latter.This paper surveys the body of evidence built up over the last decade, from a wide range of airborneexperiments, which illustrates the ability of such a sensor to provide the required measurements.At present, the BIOMASS P-band radar appears to be the only sensor capable of providing the necessary globalknowledge about the world's forest biomass and its changes. In addition, this first chance to explore the Earth'senvironment with a long wavelength satellite SAR is expected to make yield new information in a range ofgeoscience areas, including subsurface structure in arid lands and polar ice, and forest inundation dynamics.
|
|
| 16. |
- Plummer, C. J. G., et al.
(författare)
-
Influence of processing routes on morphology and low strain stiffness of polymer/nanofibrillated cellulose composites
- 2015
-
Ingår i: Plastics, rubber and composites. - 1465-8011 .- 1743-2898. ; 44:3, s. 81-86
-
Tidskriftsartikel (refereegranskat)abstract
- The morphology of polymer/nanofibrillated cellulose (NFC) composite sheets produced using different techniques and its influence on low strain stiffness were assessed by optical and transmission electron microscopy. Solvent processing led to relatively homogeneous NFC dispersions and significant reinforcement of the in-plane Young's modulus. The continuous cellular networks obtained by wet comingling of polylactide powder or latex with NFC also provided efficient and essentially scale independent reinforcement, in spite of the extensive agglomeration of the NFC. However, the irreversible nature of these networks is incompatible with low pressure thermoplastic processing routes such as physical foaming, and while they may be broken up by e.g. extrusion, this led to substantial loss in reinforcement, particularly at temperatures above the glass transition temperature of the matrix, consistent with the observation of isolated low aspect ratio NFC aggregates in the extruded specimens.
|
|
| 17. |
- Plummer, C. J. G., et al.
(författare)
-
Influence of processing routes on the morphology and properties of polymer/nanofibrillated cellulose composites
- 2014
-
Ingår i: 16th European Conference on Composite Materials, ECCM 2014. - 9780000000002
-
Konferensbidrag (refereegranskat)abstract
- The morphology of polymer/nanofibrillated cellulose (NFC) composite sheets produced using different techniques and its influence on low strain stiffness were assessed by optical and transmission electron microscopy. Solvent processing led to relatively homogeneous NFC dispersions and significant reinforcement of the in-plane Young's modulus. The continuous cellular networks obtained by wet-comingling of PLA powder or latex with NFC also provided efficient and essentially scale-independent reinforcement, in spite of the extensive agglomeration of the NFC. However, the irreversible nature of these networks is incompatible with low pressure thermoplastic processing routes such as physical foaming, and while they may be broken up by e.g. extrusion, this led to substantial loss in reinforcement, particularly above Tg, consistent with the observation of isolated low aspect ratio NFC aggregates in the extruded specimens.
|
|
| 18. |
- Schmit, Stephanie L, et al.
(författare)
-
Novel Common Genetic Susceptibility Loci for Colorectal Cancer.
- 2019
-
Ingår i: Journal of the National Cancer Institute. - : Oxford University Press (OUP). - 0027-8874 .- 1460-2105. ; 111:2, s. 146-157
-
Tidskriftsartikel (refereegranskat)abstract
- Background: Previous genome-wide association studies (GWAS) have identified 42 loci (P < 5 × 10-8) associated with risk of colorectal cancer (CRC). Expanded consortium efforts facilitating the discovery of additional susceptibility loci may capture unexplained familial risk.Methods: We conducted a GWAS in European descent CRC cases and control subjects using a discovery-replication design, followed by examination of novel findings in a multiethnic sample (cumulative n = 163 315). In the discovery stage (36 948 case subjects/30 864 control subjects), we identified genetic variants with a minor allele frequency of 1% or greater associated with risk of CRC using logistic regression followed by a fixed-effects inverse variance weighted meta-analysis. All novel independent variants reaching genome-wide statistical significance (two-sided P < 5 × 10-8) were tested for replication in separate European ancestry samples (12 952 case subjects/48 383 control subjects). Next, we examined the generalizability of discovered variants in East Asians, African Americans, and Hispanics (12 085 case subjects/22 083 control subjects). Finally, we examined the contributions of novel risk variants to familial relative risk and examined the prediction capabilities of a polygenic risk score. All statistical tests were two-sided.Results: The discovery GWAS identified 11 variants associated with CRC at P < 5 × 10-8, of which nine (at 4q22.2/5p15.33/5p13.1/6p21.31/6p12.1/10q11.23/12q24.21/16q24.1/20q13.13) independently replicated at a P value of less than .05. Multiethnic follow-up supported the generalizability of discovery findings. These results demonstrated a 14.7% increase in familial relative risk explained by common risk alleles from 10.3% (95% confidence interval [CI] = 7.9% to 13.7%; known variants) to 11.9% (95% CI = 9.2% to 15.5%; known and novel variants). A polygenic risk score identified 4.3% of the population at an odds ratio for developing CRC of at least 2.0.Conclusions: This study provides insight into the architecture of common genetic variation contributing to CRC etiology and improves risk prediction for individualized screening.
|
|
| 19. |
- Shin, Junsoo, et al.
(författare)
-
Atomistic Screening Mechanism of Ferroelectric Surfaces : An In Situ Study of the Polar Phase in Ultrathin BaTiO3 Films Exposed to H2O
- 2009
-
Ingår i: Nano letters (Print). - : American Chemical Society (ACS). - 1530-6984 .- 1530-6992. ; 9:11, s. 3720-3725
-
Tidskriftsartikel (refereegranskat)abstract
- The polarization screening mechanism and ferroelectric phase stability of ultrathin BaTiO3 films exposed to water molecules is determined by first principles theory and in situ experiment. Surface crystallography data from electron diffraction combined with density functional theory calculations demonstrate that small water vapor exposures do not affect surface structure or polarization. Large exposures result in surface hydroxylation and rippling, formation of surface oxygen vacancies, and reversal of the polarization direction. Understanding interplay between ferroelectric phase stability, screening, and atomistic processes at surfaces is a key to control low-dimensional ferroelectricity.
|
|
