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Träfflista för sökning "WFRF:(Saarinen T.) "

Sökning: WFRF:(Saarinen T.)

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  • 2017
  • swepub:Mat__t
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  • Haahtela, T, et al. (författare)
  • A short history from Karelia study to biodiversity and public health interventions
  • 2023
  • Ingår i: Frontiers in allergy. - : Frontiers Media SA. - 2673-6101. ; 4, s. 1152927-
  • Tidskriftsartikel (refereegranskat)abstract
    • Contact with natural environments enriches the human microbiome, promotes immune balance and protects against allergies and inflammatory disorders. In Finland, the allergy & asthma epidemic became slowly visible in mid 1960s. After the World War II, Karelia was split into Finnish and Soviet Union (now Russia) territories. This led to more marked environmental and lifestyle changes in the Finnish compared with Russian Karelia.The Karelia Allergy Study 2002–2022showed that allergic conditions were much more common on the Finnish side. The Russians had richer gene-microbe network and interaction than the Finns, which associated with better balanced immune regulatory circuits and lower allergy prevalence. In the Finnish adolescents, a biodiverse natural environment around the homes associated with lower occurrence of allergies. Overall, the plausible explanation of the allergy disparity was the prominent change in environment and lifestyle in the Finnish Karelia from 1940s to 1980s. The nationwideFinnish Allergy Programme 2008–2018implemented the biodiversity hypothesis into practice by endorsing immune tolerance, nature contacts, and allergy health with favorable results. A regional health and environment programme,Nature Step to Health 2022–2032, has been initiated in the City of Lahti, EU Green Capital 2021. The programme integrates prevention of chronic diseases (asthma, diabetes, obesity, depression), nature loss, and climate crisis in the spirit ofPlanetary Health. Allergic diseases exemplify inappropriate immunological responses to natural environment. Successful management of the epidemics of allergy and other non-communicable diseases may pave the way to improve human and environmental health.
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  • Horikoshi, Momoko, et al. (författare)
  • New loci associated with birth weight identify genetic links between intrauterine growth and adult height and metabolism.
  • 2013
  • Ingår i: Nature Genetics. - : Springer Science and Business Media LLC. - 1061-4036 .- 1546-1718. ; 45:1
  • Tidskriftsartikel (refereegranskat)abstract
    • Birth weight within the normal range is associated with a variety of adult-onset diseases, but the mechanisms behind these associations are poorly understood. Previous genome-wide association studies of birth weight identified a variant in the ADCY5 gene associated both with birth weight and type 2 diabetes and a second variant, near CCNL1, with no obvious link to adult traits. In an expanded genome-wide association meta-analysis and follow-up study of birth weight (of up to 69,308 individuals of European descent from 43 studies), we have now extended the number of loci associated at genome-wide significance to 7, accounting for a similar proportion of variance as maternal smoking. Five of the loci are known to be associated with other phenotypes: ADCY5 and CDKAL1 with type 2 diabetes, ADRB1 with adult blood pressure and HMGA2 and LCORL with adult height. Our findings highlight genetic links between fetal growth and postnatal growth and metabolism.
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  • Paskova, T., et al. (författare)
  • Effect of high-temperature annealing on the residual strain and bending of freestanding GaN films grown by hydride vapor phase epitaxy
  • 2006
  • Ingår i: Applied Physics Letters. - : AIP Publishing. - 0003-6951 .- 1077-3118. ; 88:14, s. 141909-
  • Tidskriftsartikel (refereegranskat)abstract
    • The effect of high-temperature high-pressure annealing on the residual strain, bending, and point defect redistribution of freestanding hydride vapor phase epitaxial GaN films was studied. The bending was found to be determined by the difference in the in-plane lattice parameters in the two faces of the films. The results showed a tendency of equalizing the lattice parameters in the two faces with increasing annealing temperature, leading to uniform strain distribution across the film thickness. A nonmonotonic behavior of structural parameters with increasing annealing temperature was revealed and related to the change in the point defect content under the high-temperature treatment. © 2006 American Institute of Physics.
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  • Tuomisto, T., et al. (författare)
  • Thermal stability of in-grown vacancy defects in GaN grown by hydride vapor phase epitaxy
  • 2006
  • Ingår i: Journal of Applied Physics. - : AIP Publishing. - 0021-8979 .- 1089-7550. ; 99:6
  • Tidskriftsartikel (refereegranskat)abstract
    • We have used positron annihilation spectroscopy to study the thermal behavior of different native vacancy defects typical of freestanding GaN grown by hydride vapor phase epitaxy under high pressure annealing at different annealing temperatures. The results show that the VGa - ON pairs dissociate and the Ga vacancies anneal out from the bulk of the material at temperatures 1500-1700 K. A binding energy of Eb =1.6 (4) eV can be determined for the pair. Thermal formation of Ga vacancies is observed at the annealing temperatures above 1700 K, indicating that Ga vacancies are created thermally at the high growth temperature, but their ability to form complexes such as VGa - ON determines the fraction of vacancy defects surviving the cooling down. The formation energy of the isolated Ga vacancy is experimentally determined. © 2006 American Institute of Physics.
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  • Hall, C. Michael, et al. (författare)
  • Denying bogus skepticism in climate change and tourism research.
  • 2015
  • Ingår i: Tourism Management. - : Elsevier BV. - 0261-5177 .- 1879-3193. ; 47, s. 352-356
  • Tidskriftsartikel (refereegranskat)abstract
    • This final response to the two climate change denial papers by Shani and Arad further highlights the inaccuracies, misinformation and errors in their commentaries. The obfuscation of scientific research and the consensus on anthropogenic climate change may have significant long-term negative consequences for better understanding the implications of climate change and climate policy for tourism and create confusion and delay in developing and implementing tourism sector responses.
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  • Hall, C. Michael, et al. (författare)
  • No time for smokescreen skepticism : A rejoinder to Shani and Arad
  • 2015
  • Ingår i: Tourism Management. - : Elsevier BV. - 0261-5177 .- 1879-3193. ; 47, s. 341-347
  • Tidskriftsartikel (refereegranskat)abstract
    • Shani and Arad (2014) claimed that tourism scholars tend to endorse the most pessimistic assessments regarding climate change, and that anthropogenic climate change was a "fashionable" and "highly controversial scientific topic". This brief rejoinder provides the balance that is missing from such climate change denial and skepticism studies on climate change and tourism. Recent research provides substantial evidence that reports on anthropogenic climate change are accurate, and that human-induced greenhouse gas emissions, including from the tourism industry, play a significant role in climate change. Some positive net effects may be experienced by some destinations in the short-term, but in the long-term all elements of the tourism system will be impacted. The expansion of tourism emissions at a rate greater than efficiency gains means that it is increasingly urgent that the tourism sector acknowledge, accept and respond to climate change. Debate on tourism-related adaptation and mitigation measures is to be encouraged and welcomed. Climate change denial is not.
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13.
  • Heinosalo, T., et al. (författare)
  • Overexpression of Human Estrogen Biosynthetic Enzyme Hydroxysteroid (17beta) Dehydrogenase Type 1 Induces Adenomyosis-like Phenotype in Transgenic Mice
  • 2022
  • Ingår i: International Journal of Molecular Sciences. - : MDPI AG. - 1422-0067. ; 23:9
  • Tidskriftsartikel (refereegranskat)abstract
    • Hydroxysteroid (17beta) dehydrogenase type 1 (HSD17B1) is an enzyme that converts estrone to estradiol, while adenomyosis is an estrogen-dependent disease with poorly understood pathophysiology. In the present study, we show that mice universally over-expressing human estrogen biosynthetic enzyme HSD17B1 (HSD17B1TG mice) present with adenomyosis phenotype, characterized by histological and molecular evaluation. The first adenomyotic changes with endometrial glands partially or fully infiltrated into the myometrium appeared at the age of 5.5 months in HSD17B1TG females and became more prominent with increasing age. Preceding the phenotype, increased myometrial smooth muscle actin positivity and increased amount of glandular myofibroblast cells were observed in HSD17B1TG uteri. This was accompanied by transcriptomic upregulation of inflammatory and estrogen signaling pathways. Further, the genes upregulated in the HSD17B1TG uterus were enriched with genes previously observed to be induced in the human adenomyotic uterus, including several genes of the NFKB pathway. A 6-week-long HSD17B1 inhibitor treatment reduced the occurrence of the adenomyotic changes by 5-fold, whereas no effect was observed in the vehicle-treated HSD17B1TG mice, suggesting that estrogen is the main upstream regulator of adenomyosis-induced uterine signaling pathways. HSD17B1 is considered as a promising drug target to inhibit estrogen-dependent growth of endometrial disorders. The present data indicate that HSD17B1 over-expression in TG mice results in adenomyotic changes reversed by HSD17B1 inhibitor treatment and HSD17B1 is, thus, a potential novel drug target for adenomyosis.
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  • Linko, R, et al. (författare)
  • Corticosteroid therapy in intensive care unit patients with PCR-confirmed influenza A(H1N1) infection in Finland
  • 2011
  • Ingår i: Acta Anaesthesiologica Scandinavica. - : Wiley. - 0001-5172 .- 1399-6576. ; 55:8, s. 971-979
  • Tidskriftsartikel (refereegranskat)abstract
    • OBJECTIVE:To evaluate the incidence, treatment, and outcome of influenza A(H1N1) in Finnish intensive care units (ICUs) with special reference to corticosteroid treatment.METHODS:During the H1N1 outbreak in Finland between 11 October and 31 December 2009, we prospectively evaluated all consecutive ICU patients with high suspicion of or confirmed pandemic influenza A(H1N1) infection. We assessed severity of acute disease and daily organ dysfunction. Ventilatory support and other concomitant treatments were evaluated and recorded daily throughout the ICU stay. The primary outcome was hospital mortality.RESULTS:During the 3-month period altogether 132 ICU patients were tested polymerase chain reaction-positive for influenza A(H1N1). Of these patients, 78% needed non-invasive or invasive ventilatory support. The median (interquartile) length of ICU stay was 4 [2-12] days. Hospital mortality was 10 of 132 [8%, 95% confidence interval (CI) 3-12%]. Corticosteroids were administered to 72 (55%) patients, but rescue therapies except prone positioning were infrequently used. Simplified Acute Physiology Score II and Sequential Organ Failure Assessment scores in patients with and without corticosteroid treatment were 31 [24-36] and 6 [2-8] vs. 22 [5-30] and 3 [2-6], respectively. The crude hospital mortality was not different in patients with corticosteroid treatment compared to those without: 8 of 72 (11%, 95% CI 4-19%) vs. 2 of 60 (3%, 95% CI 0-8%) (P = 0.11).CONCLUSIONS:The majority of H1N1 patients in ICUs received ventilatory support. Corticosteroids were administered to more than half of the patients. Despite being more severely ill, patients given corticosteroids had comparable hospital outcome with patients not given corticosteroids.
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  • Paananen, A., et al. (författare)
  • Interaction between cellulose and xylan : An atomic force microscope and quartz crystal microbalance study
  • 2004
  • Ingår i: Hemicellulose. - 0841238421 ; , s. 269-290
  • Konferensbidrag (refereegranskat)abstract
    • The atomic force microscope (AFM) colloidal probe technique has been used to investigate forces between cellulose beads as well as cellulose beads and mica in aqueous solution, and the interaction between cellulose surfaces in xylan solutions. Several observations of the behaviour of the cellulose beads were made. Swelling of the beads in aqueous solutions is rather slow. Thus, it is important to let the beads equilibrate before measurements. The beads are somewhat compressed when forced together to constant compliance, but relax back to their original shape in a few minutes. A long-range electrostatic repulsion between cellulose and mica occurs on approach. The xylan concentration in solution affects the forces between two cellulose surfaces. When the concentration increases from 10-100 mg/l more xylan adsorbs slowly and irreversibly on the cellulose leading to an increasingly long-range and stronger repulsion between the surfaces on approach. Adhesion between the layers is very low and seems to be due to entanglement of polymer chains. Studies of the adsorption of xylan (100 mg/l) on cellulose films with a quartz crystal microbalance with dissipation (QCM-D) verify that a thick, water-swollen layer of xylan is formed by slow adsorption. It has been proposed that adsorbed xylan on fibre surfaces increases paper strength. We conclude that this must be associated with the behaviour of the adsorbed layers of xylan on drying.
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  • Reckermann, M., et al. (författare)
  • Human impacts and their interactions in the Baltic Sea region
  • 2022
  • Ingår i: Earth Syst. Dynam.. - : Copernicus GmbH. - 2190-4987 .- 2190-4979. ; 13:1, s. 1-80
  • Forskningsöversikt (refereegranskat)abstract
    • Coastal environments, in particular heavily populated semi-enclosed marginal seas and coasts like the Baltic Sea region, are strongly affected by human activities. A multitude of human impacts, including climate change, affect the different compartments of the environment, and these effects interact with each other. As part of the Baltic Earth Assessment Reports (BEAR), we present an inventory and discussion of different human-induced factors and processes affecting the environment of the Baltic Sea region, and their interrelations. Some are naturally occurring and modified by human activities (i.e. climate change, coastal processes, hypoxia, acidification, submarine groundwater discharges, marine ecosystems, non-indigenous species, land use and land cover), some are completely human-induced (i.e. agriculture, aquaculture, fisheries, river regulations, offshore wind farms, shipping, chemical contamination, dumped warfare agents, marine litter and microplastics, tourism, and coastal management), and they are all interrelated to different degrees. We present a general description and analysis of the state of knowledge on these interrelations. Our main insight is that climate change has an overarching, integrating impact on all of the other factors and can be interpreted as a background effect, which has different implications for the other factors. Impacts on the environment and the human sphere can be roughly allocated to anthropogenic drivers such as food production, energy production, transport, industry and economy. The findings from this inventory of available information and analysis of the different factors and their interactions in the Baltic Sea region can largely be transferred to other comparable marginal and coastal seas in the world.
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  • Žliobaitė, Indrė, et al. (författare)
  • The NOW Database of Fossil Mammals
  • 2023
  • Ingår i: Evolution of Cenozoic Land Mammal Faunas and Ecosystems: 25 years of the NOW database of fossil mammals. - : Springer. ; , s. 33-42
  • Bokkapitel (refereegranskat)abstract
    • NOW (New and Old Worlds) is a global database of fossil mammal occurrences, currently containing around 68,000 locality-species entries. The database spans the last 66 million years, with its primary focus on the last 23 million years. Whereas the database contains records from all continents, the main focus and coverage of the database historically has been on Eurasia. The database includes primarily, but not exclusively, terrestrial mammals. It covers a large part of the currently known mammalian fossil record, focusing on classical and actively researched fossil localities. The database is managed in collaboration with an international advisory board of experts. Rather than a static archive, it emphasizes the continuous integration of new knowledge of the community, data curation, and consistency of scientific interpretations. The database records species occurrences at localities worldwide, as well as ecological characteristics of fossil species, geological contexts of localities and more. The NOW database is primarily used for two purposes: (1) queries about occurrences of particular taxa, their characteristics and properties of localities in the spirit of an encyclopedia; and (2) large scale research and quantitative analyses of evolutionary processes, patterns, reconstructing past environments, as well as interpreting evolutionary contexts. The data are fully open, no logging in or community membership is necessary for using the data for any purpose.
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  • Berendse, F, et al. (författare)
  • Raised atmospheric CO2 levels and increased N deposition cause shifts in plant species composition and production in Sphagnum bogs
  • 2001
  • Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 7:5, s. 591-598
  • Tidskriftsartikel (refereegranskat)abstract
    • Part of the missing sink in the global CO2 budget has been attributed to the positive effects of CO2 fertilization and N deposition on carbon sequestration in Northern Hemisphere terrestrial ecosystems. The genus Sphagnum is one of the most important groups of plant species sequestrating carbon in temperate and northern bog ecosystems, because of the low decomposability of the dead material it produces. The effects of raised CO2 and increased atmospheric N deposition on growth of Sphagnum and other plants were studied in bogs at four sites across Western Europe. Contrary to expectations, elevated CO2 did not significantly affect Sphagnum biomass growth. Increased N deposition reduced Sphagnum mass growth, because it increased the cover of vascular plants and the tall moss Polytrichum strictum. Such changes in plant species composition may decrease carbon sequestration in Sphagnum-dominated bog ecosystems.
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  • Fortelius, Mikael, et al. (författare)
  • The Origin and Early History of NOW as It Happened
  • 2023
  • Ingår i: Evolution of Cenozoic Land Mammal Faunas and Ecosystems: 25 years of the NOW database of fossil mammals.. - : Springer. ; , s. 7-32
  • Bokkapitel (refereegranskat)abstract
    • The NOW database of fossil mammals came to be through a confluence of several initiatives spanning multiple decades. The first public version of NOW database was released in 1996 and the first Advisory Board was established the year after. Originally, NOW stood for Neogene of the Old World but with the gradual expansion of the database the acronym was eventually reassigned to stand for New and Old Worlds. The structure of what would become NOW was originally cloned from the ETE database of the Smithsonian Institution and the first NOW version accessible over the internet was a node of the ETE database. The first standalone, online version of NOW was launched in 2005 and the first formal steering group was established in 2009. During its existence, NOW has been funded, directly or indirectly, by several organizations but fundamentally it has always been an unfunded community effort, dependent on voluntary work by the participants.
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35.
  • Giuliani, G., et al. (författare)
  • Round-Robin Measurements of Linewidth Enhancement Factor of Semiconductor Lasers in COST 288 Action
  • 2007
  • Ingår i: Lasers and Electro-Optics, 2007 and the International Quantum Electronics Conference. CLEOE-IQEC 2007. European Conference on. - 1424409306 - 9781424409303 ; , s. 4385967-
  • Konferensbidrag (refereegranskat)abstract
    • Round-robin measurements on the linewidth enhancement factor are carried out in many laboratories participating to EU COST 288 Action. Up to 7 different techniques are applied to DFB, VCSELs, QCL, and QD lasers, and results are compared.
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  • Huang, S., et al. (författare)
  • Mammal body size evolution in North America and Europe over 20 Myr: similar trends generated by different processes
  • 2017
  • Ingår i: Proceedings of the Royal Society B - Biological Sciences. - : The Royal Society. - 0962-8452 .- 1471-2954. ; 284:1849
  • Tidskriftsartikel (refereegranskat)abstract
    • Because body size interacts with many fundamental biological properties of a species, body size evolution can be an essential component of the generation and maintenance of biodiversity. Here we investigate how body size evolution can be linked to the clade-specific diversification dynamics in different geographical regions. We analyse an extensive body size dataset of Neogene large herbivores (covering approx. 50% of the 970 species in the orders Artiodactyla and Perissodactyla) in Europe and North America in a Bayesian framework. We reconstruct the temporal patterns of body size in each order on each continent independently, and find significant increases of minimum size in three of the continental assemblages (except European perissodactyls), suggesting an active selection for larger bodies. Assessment of trait-correlated birth-death models indicates that the common trend of body size increase is generated by different processes in different clades and regions. Larger-bodied artiodactyl species on both continents tend to have higher origination rates, and both clades in North America show strong links between large bodies and low extinction rate. Collectively, our results suggest a strong role of species selection and perhaps of higher-taxon sorting in driving body size evolution, and highlight the value of investigating evolutionary processes in a biogeographic context.
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  • Kaasinen, E, et al. (författare)
  • Impact of constitutional TET2 haploinsufficiency on molecular and clinical phenotype in humans
  • 2019
  • Ingår i: Nature communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 10:1, s. 1252-
  • Tidskriftsartikel (refereegranskat)abstract
    • Clonal hematopoiesis driven by somatic heterozygous TET2 loss is linked to malignant degeneration via consequent aberrant DNA methylation, and possibly to cardiovascular disease via increased cytokine and chemokine expression as reported in mice. Here, we discover a germline TET2 mutation in a lymphoma family. We observe neither unusual predisposition to atherosclerosis nor abnormal pro-inflammatory cytokine or chemokine expression. The latter finding is confirmed in cells from three additional unrelated TET2 germline mutation carriers. The TET2 defect elevates blood DNA methylation levels, especially at active enhancers and cell-type specific regulatory regions with binding sequences of master transcription factors involved in hematopoiesis. The regions display reduced methylation relative to all open chromatin regions in four DNMT3A germline mutation carriers, potentially due to TET2-mediated oxidation. Our findings provide insight into the interplay between epigenetic modulators and transcription factor activity in hematological neoplasia, but do not confirm the putative role of TET2 in atherosclerosis.
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  • Kallioniemi, I., et al. (författare)
  • Characterization of random rough surfaces from scattered intensities by neural networks
  • 2001
  • Ingår i: Journal of Modern Optics. - 0950-0340 .- 1362-3044. ; 48:9, s. 1447-1453
  • Tidskriftsartikel (refereegranskat)abstract
    • Optical scatterometry, a non-invasive characterization method, is used to infer the statistical properties of random rough surfaces. The Gaussian model with rms-roughness sigma and correlation length Lambda is considered in this paper but the employed technique is applicable to any representation of random rough surfaces. Surfaces with wide ranges of Lambda and sigma, up to 5 wavelengths (lambda), are characterized with neural networks. Two models are used: self-organizing map (SOM) for rough classification and multi-layer perceptron (MLP) for quantitative estimation with nonlinear regression. Models infer Lambda and sigma from scattering, thus involving the inverse problem. The intensities are calculated with the exact electromagnetic theory, which enables a wide range of parameters. The most widely known neural network model in practise is SOM, which we use to organize samples into discrete classes with resolution Delta Lambda = Delta sigma = 0.5 lambda. The more advanced MLP model is trained for optimal behaviour by providing it with known parts of input (scattering) and output (surface parameters). We show that a small amount of data is sufficient for an excellent accuracy on the order of 0.3 lambda and 0.15 lambda for estimating Lambda and sigma, respectively.
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  • Kanerva, Tomi, et al. (författare)
  • Microstructural characteristics of vehicle-aged heavy-duty diesel oxidation catalyst and natural gas three-way catalyst
  • 2019
  • Ingår i: Catalysts. - : MDPI AG. - 2073-4344. ; 9:2
  • Tidskriftsartikel (refereegranskat)abstract
    • Techniques to control vehicle engine emissions have been under increasing need for development during the last few years in the more and more strictly regulated society. In this study, vehicle-aged heavy-duty catalysts from diesel and natural gas engines were analyzed using a cross-sectional electron microscopy method with both a scanning electron microscope and a transmission electron microscope. Also, additional supporting characterization methods including X-ray diffractometry, X-ray photoelectron spectroscopy, Fourier-transform infrared spectroscopy and catalytic performance analyses were used to reveal the ageing effects. Structural and elemental investigations were performed on these samples, and the effect of real-life ageing of the catalyst was studied in comparison with fresh catalyst samples. In the real-life use of two different catalysts, the poison penetration varied greatly depending on the engine and fuel at hand: the diesel oxidation catalyst appeared to suffer more thorough changes than the natural gas catalyst, which was affected only in the inlet part of the catalyst. The most common poison, sulphur, in the diesel oxidation catalyst was connected to cerium-rich areas. On the other hand, the severities of the ageing effects were more pronounced in the natural gas catalyst, with heavy structural changes in the washcoat and high concentrations of poisons, mainly zinc, phosphorus and silicon, on the surface of the inlet part.
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  • Kivinen, Sonja, et al. (författare)
  • Threat spots and environmental determinants of red-listed plant, butterfly and bird species in boreal agricultural environments
  • 2008
  • Ingår i: Biodiversity and Conservation. - : Springer Science and Business Media LLC. - 0960-3115 .- 1572-9710. ; 17:13, s. 3289-3305
  • Tidskriftsartikel (refereegranskat)abstract
    • The aims of this study were (1) to examine the geographic distribution of red-listed species of agricultural environments and identify their national threat spots (areas with high diversity of threatened species) in Finland and (2) to determine the main environmental variables related to the richness and occurrence patterns of red-listed species. Atlas data of 21 plant, 17 butterfly and 11 bird species recorded using 10 km grid squares were employed in the study. Generalized additive models (GAMs) were constructed separately for species richness and occurrence of individual species of the three species groups using climate and land cover predictor variables. The predictive accuracy of models, as measured using correlation between the observed and predicted values and AUC statistics, was generally good. Temperature-related variables were the most important determinants of species richness and occurrence of all three taxa. In addition, land cover variables had a strong effect on the distribution of species. Plants and butterflies were positively related to the cover of grasslands and birds to small-scale agricultural mosaic as well as to arable land. Spatial coincidence of threat spots of plants, butterflies and birds was limited, which emphasizes the importance of considering the potentially contrasting environmental requirements of different taxa in conservation planning. Further, it is obvious that the maintenance of various non-crop habitats and heterogeneous agricultural landscapes has an essential role in the preservation of red-listed species of boreal rural environments.
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42.
  • Kotliar, IB, et al. (författare)
  • Expanding the GPCR-RAMP interactome
  • 2023
  • Ingår i: bioRxiv : the preprint server for biology.
  • Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
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43.
  • Laukkanen, P, et al. (författare)
  • Electronic and structural properties of GaAs(100)(2x4) and InAs(100)(2x4) surfaces studied by core-level photoemission and scanning tunneling microscopy
  • 2005
  • Ingår i: Physical Review B (Condensed Matter and Materials Physics). - 1098-0121. ; 72:4
  • Tidskriftsartikel (refereegranskat)abstract
    • Electronic and structural properties of GaAs(100)(2x4), InAs(100)(2x4), and Sb/InAs(100)(2x4) reconstructed surfaces have been studied by synchrotron-radiation photoelectron spectroscopy and scanning tunneling microscopy (STM). Based on the difference spectrum of As 3d core-level spectra of III-As(100)(2x4), measured in different surface-sensitivity conditions, as well as the line shape of the As 3d emission from the Sb-induced (2x4) surface, we give evidence that the As 3d spectra of GaAs(100)(2x4) and InAs(100)(2x4) consist of two surface-core-level-shifted components. One of them is shifted about 0.2 eV to the lower kinetic energy from the bulk component. On the basis of the relative component intensities, this surface-shifted As 3d component is assigned to the emission from the first-layer As dimers in the established model of the (2x4) surface. The other component, shifted about 0.3 eV to the higher kinetic energy, is connected to the third-layer As-dimer site. The comparison of the core-level results between GaAs(100)(2x4) and InAs(100)(2x4) suggests that the alpha 2 phase, which has one As dimer in both the first and third atomic layers per unit cell, exists on GaAs(100)(2x4), similarly to the case of InAs(100)(2x4), as predicted in theory but not observed to date. Furthermore, the STM observation of the GaAs(100)(2x4)alpha 2 phase is reported.
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  • Miglietta, F, et al. (författare)
  • Spatial and Temporal Performance of the MiniFACE (Free Air CO2 Enrichment) System on Bog Ecosystems in Northern and Central Europe
  • 2001
  • Ingår i: Environmental Monitoring & Assessment. - 1573-2959. ; 66:2, s. 107-127
  • Tidskriftsartikel (refereegranskat)abstract
    • The Bog Ecosystem Research Initiative (BERI) projectwas initiated to investigate, at five climaticallydifferent sites across Europe, the effects of elevatedCO2 and N deposition on the net exchange ofCO2 and CH4 between bogs and the atmosphere,and to study the effects of elevated CO2 and Ndeposition on the plant biodiversity of bogcommunities. A major challenge to investigate theeffects of elevated CO2 on vegetation andecosystems is to apply elevated CO2concentrations to growing vegetation without changingthe physical conditions like climate and radiation.Most available CO2 enrichment methods disturb thenatural conditions to some degree, for instance closedchambers or open top chambers. Free Air CO2Enrichment (FACE) systems have proven to be suitableto expose plants to elevated CO2 concentrationswith minimal disturbance of their natural environment.The size and spatial scale of the vegetation studiedwithin the BERI project allowed the use of a modifiedversion of a small FACE system called MiniFACE. Thispaper describes the BERI MiniFACE design as well asits temporal and spatial performance at the five BERIfield locations. The temporal performance of theMiniFACE system largely met the quality criteriadefined by the FACE Protocol. One minute averageCO2 concentrations measured at the centre of thering stayed within 20% of the pre-set target for morethan 95% of the time. Increased wind speeds werefound to improve the MiniFACE system's temporalperformance. Spatial analyses showed no apparentCO2 gradients across a ring during a 4 day periodand the mean differences between each sampling pointand the centre of the ring did not exceed 10%.Observations made during a windy day, causing aCO2 concentration gradient, and observations madeduring a calm day indicated that short term gradientstend to average out over longer periods of time. On aday with unidirectional strong winds, CO2concentrations at the upwind side of the ring centrewere higher than those made at the centre and at thedownwind side of the ring centre, but the bell-shapeddistribution was found basically the same for thecentre and the four surrounding measurement points,implying that the short term (1 sec) variability ofCO2 concentrations across the MiniFACE ring isalmost the same at any point in the ring. Based on gasdispersion simulations and measured CO2concentration profiles, the possible interferencebetween CO2-enriched and control rings was foundto be negligible beyond a centre-to-centre ringdistance of 6 m.
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47.
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48.
  • Mitchell, EAD, et al. (författare)
  • Relationships among testate amoebae (Protozoa), vegetation and water chemistry in five Sphagnum-dominated peatlands in Europe
  • 2000
  • Ingår i: New Phytologist. - : Wiley. - 0028-646X .- 1469-8137. ; 145:1, s. 95-106
  • Tidskriftsartikel (refereegranskat)abstract
    • To study the relationships between groups of organisms and the degree to which these relationships are consistent across major climatic gradients, we analysed the testate amoeba (Protozoa) communities, vegetation and water chemistry of one peatland in five countries: Switzerland, The Netherlands, Great Britain, Sweden and Finland, as part of the BERI (Bog Ecosystem Research Initiative) project. The relationships between the different data sets and subsets were investigated by means of detrended correspondence analysis, canonical correspondence analysis and Mantel permutation tests. The comparison of data on vegetation and testate amoebae showed that inter-site differences are more pronounced for the vegetation than for the testate amoebae species assemblage. Testate amoebae are a useful tool in multi-site studies and in environmental monitoring of peatlands because: (1) the number of species in Sphagnum-dominated peatlands is much higher than for mosses or vascular plants; (2) most peatland species are cosmopolitan in their distributions and therefore less affected than plants by biogeographical distribution patterns, thus differences in testate amoeba assemblages can be interpreted primarily in terms of ecology; (3) they are closely related to the ecological characteristics of the exact spot where they live, therefore they can be used to analyse small-scale gradients that play a major role in the functioning of peatland ecosystems. This study revealed the existence of small-scale vertical gradients within the vegetation and life-form niche separation in response to water chemistry. The deep-rooted plants such as Carex spp. and Eriophorum spp. are related to the chemistry of water sampled at or near the ground water table, whereas the mosses are not. Testate amoebae were shown to be ecologically more closely related to the chemistry of water sampled at or near the water table level and to the mosses than to the deep-rooted plants.
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