| 1. |
- Midtvedt, Benjamin, et al.
(författare)
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Single-shot self-supervised object detection in microscopy
- 2022
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723 .- 2041-1723. ; 13:1
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Tidskriftsartikel (refereegranskat)abstract
- Object detection is a fundamental task in digital microscopy, where machine learning has made great strides in overcoming the limitations of classical approaches. The training of state-of-the-art machine-learning methods almost universally relies on vast amounts of labeled experimental data or the ability to numerically simulate realistic datasets. However, experimental data are often challenging to label and cannot be easily reproduced numerically. Here, we propose a deep-learning method, named LodeSTAR (Localization and detection from Symmetries, Translations And Rotations), that learns to detect microscopic objects with sub-pixel accuracy from a single unlabeled experimental image by exploiting the inherent roto-translational symmetries of this task. We demonstrate that LodeSTAR outperforms traditional methods in terms of accuracy, also when analyzing challenging experimental data containing densely packed cells or noisy backgrounds. Furthermore, by exploiting additional symmetries we show that LodeSTAR can measure other properties, e.g., vertical position and polarizability in holographic microscopy.
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| 2. |
- Pavia, Henrik, 1964, et al.
(författare)
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Chemical defences against herbivores
- 2012
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Ingår i: Chemical ecology in aquatic systems. - New York, US : Oxford University Press. - 9780199583096 ; , s. 210-235
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Bokkapitel (refereegranskat)abstract
- In recent years it has become increasingly clear that chemical interactions play a fundamental role in aquatic habitats and have far-reaching evolutionary and ecological consequences. A plethora of studies have shown that aquatic organisms from most taxa and functional groups respond to minute concentrations of chemical substances released by other organisms. However, our knowledge of this 'chemical network' is still negligible. Chemical interactions can be divided into two larger sub-areas based on the function of the chemical substance. First, there are interactions where chemical substances are toxic to other organisms and are used as a defense against consumers (including both herbivores and predators) or a weapon against competitors (allelopathy). Second, chemical substances mey be used as a source for information of the environment; for example: how can I find the optimal habitat, the best food, the nicest partner, and avoid being eaten? Aquatic organisms are able to detect and respond to extremely low concentrations of chemical cues to answer all these questions. The book aims at connecting these intriguing chemical interactions with traditional knowledge of organism interactions. Chemical ecology in aquatic systems covers a wide range of studies, both plant and animal, from different geographic regions and habitats-pelagic as well as benthic. Most of the chemical interactions are similar in freshwater and marine habitats and this book therefor strives at integrating work on both systems. This accessible, research-level text is aimed at graduate students and professional researchers in the fields of limnology, marine ecology, evolutionary biology, behavioral ecology, and chemical ecology.
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| 3. |
- Selander, Erik, 1973, et al.
(författare)
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Copepods induce paralytic shellfish toxin production in marine dinoflagellates
- 2006
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Ingår i: Proceedings of the Royal Society B-Biological Sciences. - : The Royal Society. - 0962-8452 .- 1471-2954. ; 273:1594, s. 1673-1680
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Tidskriftsartikel (refereegranskat)abstract
- Among the thousands of unicellular phytoplankton species described in the sea, some frequently occurring and bloom-forming marine dinoflagellates are known to produce the potent neurotoxins causing paralytic shellfish poisoning. The natural function of these toxins is not clear, although they have been hypothesized to act as a chemical defence towards grazers. Here, we show that waterborne cues from the copepod Acartia tonsa induce paralytic shellfish toxin (PST) production in the harmful algal bloom-forming dinoflagellate Alexandrium minutum. Induced A. minutum contained up to 2.5 times more toxins than controls and was more resistant to further copepod grazing. Ingestion of non-toxic alternative prey was not affected by the presence of induced A. minutum. The ability of A. minutum to sense and respond to the presence of grazers by increased PST production and increased resistance to grazing may facilitate the formation of harmful algal blooms in the sea.
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| 4. |
- Toth, Gunilla B., 1973, et al.
(författare)
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Marine dinoflagellates show induced life-history shifts to escape parasite infection in response to water-borne signals
- 2004
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Ingår i: Proceedings of the Royal Society of London Series B-Biological Sciences. - : The Royal Society. - 0962-8452 .- 1471-2954. ; 271:1540, s. 733-738
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Tidskriftsartikel (refereegranskat)abstract
- Many dinoflagellate species form dormant resting cysts as a part of their life cycle, and in some freshwater species, hatching of these cysts can be delayed by the presence of water-borne signals from grazing zooplankton. Some marine dinoflagellates can form temporary cysts, which may function to resist unfavourable short-term environmental conditions. We investigated whether the marine dinoflagellate Alexandrium ostenfeldii is able to induce an increased resistance to the parasitic flagellate Parvilucifera infectans by forming temporary cysts. We performed several laboratory experiments where dinoflagellates were exposed either to direct contact with parasites or to filtered water from cultures of parasite-infected conspecifics (parasite-derived signals). Infection by P. infectans is lethal to motile A. ostenfeldii cells, but temporary cysts were more resistant to parasite infection. Furthermore, A. ostenfeldii induced a shift in life-history stage (from motile cells to temporary cysts) when exposed to parasite-derived water-borne signals. The response was relaxed within a couple of hours, indicating that A. ostenfeldii may use this behaviour as a short-term escape mechanism to avoid parasite infection. The results suggest that intraspecies chemical communication evoked by biotic interactions can be an important mechanism controlling life-history shifts in marine dinoflagellates, which may have implications for the development of toxic algal blooms.
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| 5. |
- Amato, Alberto, et al.
(författare)
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Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi
- 2018
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Ingår i: ISME Journal. - : Springer Science and Business Media LLC. - 1751-7362 .- 1751-7370. ; 12, s. 1594-1604
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Tidskriftsartikel (refereegranskat)abstract
- Diatoms and copepods are main actors in marine food webs. The prey-predator interactions between them affect bloom dynamics, shape marine ecosystems and impact the energy transfer to higher trophic levels. Recently it has been demonstrated that the presence of grazers may affect the diatom prey beyond the direct effect of grazing. Here, we investigated the response of the chain-forming centric diatom Skeletonema marinoi to grazer cues, including changes in morphology, gene expression and metabolic profile. S. marinoi cells were incubated with Calanus finmarchicus or with Centropages typicus and in both cases responded by reducing the chain length, whereas changes in gene expression indicated an activation of stress response, changes in the lipid and nitrogen metabolism, in cell cycle regulation and in frustule formation. Transcripts linked to G protein-coupled receptors and to nitric oxide synthesis were differentially expressed suggesting involvement of these signalling transduction pathways in the response. Downregulation of a lipoxygenase in the transcriptomic data and of its products in the metabolomic data also indicate an involvement of oxylipins. Our data contribute to a better understanding of the gene function in diatoms, providing information on the nature of genes implicated in the interaction with grazers, a crucial process in marine ecosystems.
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| 6. |
- Arias, A., et al.
(författare)
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Predator Chemical Cue Effects on the Diel Feeding Behaviour of Marine Protists
- 2021
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Ingår i: Microbial Ecology. - : Springer Science and Business Media LLC. - 0095-3628 .- 1432-184X. ; 82:2, s. 356-364
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Tidskriftsartikel (refereegranskat)abstract
- We have assessed the effect of copepod chemical cues on the diel feeding rhythms of heterotrophic and mixotrophic marine protists. All phagotrophic protists studied exhibited relatively high diurnal feeding rates. The magnitude of the diel feeding rhythm, expressed as the quotient of day and night ingestion rates, was inversely related to the time that phagotrophic protists were maintained in the laboratory in an environment without predators. In the case of the recently isolated ciliate Strombidium arenicola, the rhythm was lost after a few months. When challenged with chemical alarm signals (copepodamides) from the copepod Calanus finmarchicus at realistic concentrations (0.6-6 pM), S. arenicola partially re-established diurnal feeding. Conversely, the amplitude of the diel feeding rhythm for the ciliate Mesodinium rubrum was not affected by copepodamides, although the 24-h integrated food intake increased by approximately 23%. For the dinoflagellates Gyrodinium dominans and Karlodinium armiger, copepodamides significantly reduced the amplitude of their diel feeding rhythms; significant positive effects on total daily ingestion were only observed in G. dominans. Finally, the dinoflagellate Oxyrrhis marina, isolated >20 years ago, showed inconsistent responses to copepodamides, except for an average 6% increase in its total ingestion over 24 h. Our results demonstrate that the predation risk by copepods affects the diel feeding rhythm of marine protists and suggests a species-specific response to predation threats.
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| 7. |
- Bachimanchi, Harshith, et al.
(författare)
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Deep-learning-powered data analysis in plankton ecology
- 2024
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Ingår i: Limnology And Oceanography Letters. - 2378-2242.
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Forskningsöversikt (refereegranskat)abstract
- The implementation of deep learning algorithms has brought new perspectives to plankton ecology. Emerging as an alternative approach to established methods, deep learning offers objective schemes to investigate plankton organisms in diverse environments. We provide an overview of deep-learning-based methods including detection and classification of phytoplankton and zooplankton images, foraging and swimming behavior analysis, and finally ecological modeling. Deep learning has the potential to speed up the analysis and reduce the human experimental bias, thus enabling data acquisition at relevant temporal and spatial scales with improved reproducibility. We also discuss shortcomings and show how deep learning architectures have evolved to mitigate imprecise readouts. Finally, we suggest opportunities where deep learning is particularly likely to catalyze plankton research. The examples are accompanied by detailed tutorials and code samples that allow readers to apply the methods described in this review to their own data.
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| 8. |
- Bachimanchi, Harshith, et al.
(författare)
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Microplankton life histories revealed by holographic microscopy and deep learning
- 2022
-
Ingår i: eLife. - 2050-084X. ; 11
-
Tidskriftsartikel (refereegranskat)abstract
- The marine microbial food web plays a central role in the global carbon cycle. However, our mechanistic understanding of the ocean is biased toward its larger constituents, while rates and biomass fluxes in the microbial food web are mainly inferred from indirect measurements and ensemble averages. Yet, resolution at the level of the individual microplankton is required to advance our understanding of the microbial food web. Here, we demonstrate that, by combining holographic microscopy with deep learning, we can follow microplanktons throughout their lifespan, continuously measuring their three-dimensional position and dry mass. The deep-learning algorithms circumvent the computationally intensive processing of holographic data and allow rapid measurements over extended time periods. This permits us to reliably estimate growth rates, both in terms of dry mass increase and cell divisions, as well as to measure trophic interactions between species such as predation events. The individual resolution provides information about selectivity, individual feeding rates, and handling times for individual microplanktons. The method is particularly useful to detail the rates and routes of organic matter transfer in micro-zooplankton, the most important and least known group of primary consumers in the oceans. Studying individual interactions in idealized small systems provides insights that help us understand microbial food webs and ultimately larger-scale processes. We exemplify this by detailed descriptions of micro-zooplankton feeding events, cell divisions, and long-term monitoring of single cells from division to division.
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| 9. |
- Bergkvist, Johanna, 1980, et al.
(författare)
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Grazer-induced chain length plasticity reduces grazing risk in a marine diatom
- 2012
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Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590. ; 57:1, s. 318-324
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Tidskriftsartikel (refereegranskat)abstract
- We show that Skeletonema marinoi suppresses chain formation in response to copepod cues. The presence of three different copepod species (Acartia tonsa, Centropages hamatus, or Temora longicornis) significantly reduced chain length. Furthermore, chain length was significantly reduced when S. marinoi was exposed to chemical cues from caged A. tonsa without physical contact with the responding cells. The reductions in chain length significantly reduced copepod grazing; grazing rates on chains (four cells or more) were several times higher compared to that of single cells. This suggests that chain length plasticity is a means for S. marinoi to reduce copepod grazing. In contrast, chain length was not suppressed in cultures exposed to the microzooplankton grazer Gyrodinium dominans. Size-selective predation may have played a key role in the evolution of chain formation and chain length plasticity in diatoms.
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| 10. |
- Bergkvist, Johanna, 1980, et al.
(författare)
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Induction of toxin production in dinoflagellates: the grazer makes a difference
- 2008
-
Ingår i: Oecologia. - : Springer Science and Business Media LLC. - 0029-8549 .- 1432-1939. ; 156:1, s. 147-154
-
Tidskriftsartikel (refereegranskat)abstract
- The dinoflagellate Alexandrium minutum has previously been shown to produce paralytic shellfish toxins (PST) in response to waterborne cues from the copepod Acartia tonsa. In order to investigate if grazer-induced toxin production is a general or grazer-specific response of A. minutum to calanoid copepods, we exposed two strains of A. minutum to waterborne cues from three other species of calanoid copepods, Acartia clausi, Centropages typicus and Pseudocalanus sp. Both A. minutum strains responded to waterborne cues from Centropages and Acartia with significantly increased cell-specific toxicity. Waterborne cues from Centropages caused the strongest response in the A. minutum cells, with 5 to > 20 times higher toxin concentrations compared to controls. In contrast, neither of the A. minutum strains responded with significantly increased toxicity to waterborne cues from Pseudocalanus. The absolute increase in PST content was proportional to the intrinsic toxicity of the different A. minutum strains that were used. The results show that grazer-induced PST production is a grazer-specific response in A. minutum, and its potential ecological importance will thus depend on the composition of the zooplankton community, as well as the intrinsic toxin-producing properties of the A. minutum population.
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| 11. |
- Bjærke, Oda, et al.
(författare)
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Is chain length in phytoplankton regulated to evade predation?
- 2015
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Ingår i: Journal of Plankton Research. - : Oxford University Press (OUP). - 0142-7873 .- 1464-3774. ; 37:6, s. 1110-1119
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Tidskriftsartikel (refereegranskat)abstract
- Formation of cell chains in phytoplankton is ecologically important, but no single factor driving the evolution of chain formation has been identified. Chain length in the diatom Skeletonema marinoi declines in response to grazer cues, which reduces grazing losses in simple laboratory incubations. Here we explore a more ecologically relevant scenario with fluctuating populations of different sized grazers, and test whether chain-length plasticity provides a selective advantage by lower grazing mortality. We used a model with empirical grazer densities, the effect of grazer cues on chain length, and size selective grazing rates. Finally we compared the model outcome with Skeletonema chain length and copepod biomass in the field. Low copepod densities induced chain-length reduction in Skeletonema, showing that the signaling system is sensitive enough to operate in nature. The model shows that reducing chain length in response to copepod cues reduces annual grazing losses by 31 and 36% compared with fixed traits with either single cells or long chains, respectively. The field measurements agree well with chain length being regulated by grazer abundances. We conclude that chain-length plasticity is a selective trait, and suggest that grazer regime could be an evolutionary driver of chain formation in phytoplankton.
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| 12. |
- Bourlat, Sarah, et al.
(författare)
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Wrasse fishery on the Swedish West Coast: towards ecosystem-based management
- 2021
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Ingår i: ICES Journal of Marine Science. - : Oxford University Press (OUP). - 1054-3139 .- 1095-9289. ; :fsaa249
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Tidskriftsartikel (refereegranskat)abstract
- Fishing and translocation of marine species for use in aquaculture is widespread. Corkwing, goldsinny, and ballan wrasse (Symphodus melops, Ctenolabrus rupestris, and Labrus bergylta) are fished on the Swedish west coast for use as cleaner-fish in Norwegian salmon farms. Here, we aim to provide knowledge and recommendations to support ecosystem-based management for wrasse fisheries in Sweden. We compared fished and non-fished areas to test if current fishery levels have led to stock depletion. To gain insight on the role of wrasse in the algal belt trophic chain, we analysed the gut contents of goldsinny and corkwing using metabarcoding. Finally, we analysed the trophic interactions of wrasse and potential prey in a mesocosm study. We could not detect any signs of stock depletion or altered size structure in fished areas compared to the protected control area. Gut analyses confirmed both goldsinny and corkwing as non-specialized, omnivorous opportunists and revealed, with 189 prey taxa detected, a broader spectrum of prey than previously known. Common prey items included mesoherbivores such as small gastropods and crustaceans, but also insects and algae. We conclude that there are no visible signs of stock depletion at the current removal level of wrasses by the fishery. However, this emerging fishery should be closely monitored for potential cascading effects on the algal belt ecosystem, and our study could provide a baseline for future monitoring.
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| 13. |
- Fistarol, G. O., et al.
(författare)
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Allelopathy in Alexandrium spp.: effect on a natural plankton community and on algal monocultures
- 2004
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Ingår i: Aquatic Microbial Ecology. - : Inter-Research Science Center. - 0948-3055 .- 1616-1564. ; 35:1, s. 45-56
-
Tidskriftsartikel (refereegranskat)abstract
- We studied allelopathy in the dinoflagellate genus Alexandrium by testing the effect of A. tamarense on a natural plankton community from Hopavagen Bay, Trondheimsfjord, Norway, and the effect of toxic and non-toxic strains of A. tamarense and a toxic strain of A. minutum on algal monocultures. Also, a possible relation between the allelopathic effect and the production of paralytic shellfish poison (PSP) toxin was investigated. A. tamarense affected the whole phytoplankton community by decreasing the growth rate and changing the community structure (relative abundance of each species, dominant species). A negative effect of A. tamarense was also observed on ciliates, but not on bacteria numbers, In the bioassay with algal monocultures, the diatom Thalassiosira weissflogii and the cryptophyte Rhodomonas sp. were exposed to the filtrate of Alexandrium spp. All tested Alexandrium strains negatively affected T weissflogii and Rhodomonas sp. cultures, independent of whether PSP toxins were produced. The compounds released by Alexandrium caused lysis of natural and cultured algal cells, suggesting that the allelopathic effect may be connected with previously described ichthyotoxic and haemolytic properties of Alexandrium. Furthermore, the observation that several components of the plankton community were affected by compounds released by A. tamarense emphasizes the importance of allelopathy for the ecology of this species.
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| 14. |
- Govindarajan, A. F., et al.
(författare)
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The highly toxic and cryptogenic clinging jellyfish Gonionemus sp. (Hydrozoa, Limnomedusae) on the Swedish west coast
- 2019
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Ingår i: Peerj. - : PeerJ. - 2167-8359. ; 7
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Tidskriftsartikel (refereegranskat)abstract
- The clinging jellyfish Gonionemus sp. is a small hydromedusa species known historically from the Swedish west coast but not reported in recent times. This species is thought to be native to the northwest Pacific where it is notorious for causing severe stings in humans and is considered invasive or cryptogenic elsewhere. This year, unlike in the past, severe stings in swimmers making contact with Gonionemus sp. medusae occurred in Swedish waters from a sheltered eelgrass bed in the inner Skagerrak archipelago. To the best of our knowledge, this is only the second sting record of Gonionemus sp. from the Northeast Atlantic-with the first record occurring off the Belgian coast in the 1970s. Stinging Gonionemus sp. medusae have also been recently reported from the northwestern Atlantic coast, where, like on the Swedish coast, stings were not reported in the past. We analyzed sea surface temperature data from the past 30 years and show that 2018 had an exceptionally cold spring followed by an exceptionally hot summer. It is suggested that the 2018 temperature anomalies contributed to the Swedish outbreak. An analysis of mitochondrial COI sequences showed that Swedish medusae belong to the same clade as those from toxic populations in the Sea of Japan and northwest Atlantic. Gonionemus sp. is particularly prone to human-mediated dispersal and we suggest that it is possible that this year's outbreak is the result of anthropogenic factors either through a climate-driven northward range shift or an introduction via shipping activity. We examined medusa growth rates and details of medusa morphology including nematocysts. Two types of penetrating nematocysts: euryteles and b-mastigophores were observed, suggesting that Gonionemus sp. medusae are able to feed on hard-bodied organisms like copepods and cladocerans. Given the now-regular occurrence and regional spread of Gonionemus sp. in the northwest Atlantic, it seems likely that outbreaks in Sweden will continue. More information on its life cycle, dispersal mechanisms, and ecology are thus desirable.
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| 15. |
- Grebner, Wiebke, 1985, et al.
(författare)
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Induction of defensive traits in marine plankton—new copepodamide structures
- 2019
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Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 64:2, s. 820-831
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Tidskriftsartikel (refereegranskat)abstract
- Marine zooplankton release chemical cues, which trigger defenses in unicellular phytoplankton, such as increased toxin production and changes of colony sizes. Here, we identify the structure of two novel alarm cues belonging to the group of copepodamides. Similar to the known copepodamides, one of the compounds described is shown to trigger both amnesic and paralytic shellfish toxin production and chain length shortening in Skeletonema marinoi. In addition, we report the putative structures of another 21 copepodamides, which constitute 28% of the total copepodamides extractable from whole animals, suggesting that the copepodamide concentrations have been underestimated in earlier studies. We introduce a structure‐based nomenclature to handle the increasing number of copepodamides. Analysis of 12 copepod species showed that marine calanoid and freshwater cyclopoid copepods contain copepodamides. The only harpacticoid included in the analysis, Tigriopus californicus, did not appear to produce detectable amounts of copepodamides. Feeding experiments revealed that copepodamide compositions depend on both diet and species‐specific properties. Copepodamides induce both morphological and biochemical defensive traits in phytoplankton and may drive large‐scale trait–mediated effects in marine food webs. The more comprehensive list of copepodamides reported here makes it possible to explore the role of the copepodamide signaling system in the pelagic ecosystem in greater detail.
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| 16. |
- Heuschele, J., et al.
(författare)
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The chemical ecology of copepods
- 2014
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Ingår i: Journal of Plankton Research. - : Oxford University Press (OUP). - 0142-7873 .- 1464-3774. ; 36:4, s. 895-913
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Forskningsöversikt (refereegranskat)abstract
- An increasing number of studies show the importance of chemical interactions in the aquatic environment. Our understanding of the role of chemical cues and signals in larger crustaceans has advanced in the last decades. However, for copepods, the most abundant metazoan zooplankton and essential for the functioning of the marine food web, much is still unknown. We synthesize current knowledge about chemical ecology of copepods including foraging, survival and reproduction. We also compile information on the sensory apparatus and new analytical approaches that may facilitate the identification of signal molecules. The review illustrates the importance of chemical interactions in many aspects of copepod ecology and identifies gaps in our knowledge, such as the lack of identified infochemicals and electrophysiological studies to confirm the function of sensory structures. We suggest approaches that are likely to further our understanding of the role of chemical interactions in the pelagic ecosystem.
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| 17. |
- Heuschele, J., et al.
(författare)
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The sex specific metabolic footprint of Oithona davisae
- 2016
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Ingår i: Journal of Sea Research. - : Elsevier BV. - 1385-1101. ; 117, s. 1-6
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Tidskriftsartikel (refereegranskat)abstract
- In pelagic copepods, the group representing the highest animal abundances on earth, males and females have distinct morphological and behavioural differences. In several species female pheromones are known to facilitate the mate finding process, and copepod exudates induce changes in physiology and behaviour in several phytoplankton species. Here we tested whether the sexual dimorphism in morphology and behaviour is mirrored in the exudate composition of males and females. We find differences in the exudate composition, with females seemingly producing more compounds. While we were able to remove the sex pheromones from the water by filtration through reverse phase solid phase extraction columns, we were not able to recover the active pheromone from the solid phase. © 2016 Elsevier B.V.
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| 18. |
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| 19. |
- Juul-Pedersen, T., et al.
(författare)
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Sedimentation following the spring bloom in Disko Bay, West Greenland, with special emphasis on the role of copepods
- 2006
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Ingår i: Marine Ecology-Progress Series. - : Inter-Research Science Center. - 0171-8630 .- 1616-1599. ; 314, s. 239-255
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Tidskriftsartikel (refereegranskat)abstract
- The sedimentation of particulate organic material was investigated in Disko Bay, West Greenland, during June 2001. Post spring-bloom conditions were encountered, with seasonally decreasing phytoplankton biomass associated with the pycnocline. Calanus finmarchicus, C. glacialis, and C. hyperboreus dominated the zooplankton community, comprising up to 88% of the copepod biomass. Faecal pellet production by C. finmarchicus and C. glacialis was positively correlated to the available food (chlorophyll a > 10 mu m). Results from short-term sediment trap deployments (6 h) showed that particulate organic carbon (POC) sedimentation from the euphotic zone was, on average, 628 mg C m(-2) d(-1), with copepod faecal pellets contributing, on average, 29% of this amount. The faecal pellet contribution to the vertical sinking export of POC was equivalent to that of phytoplankton and amorphous detritus. Yet, on average, 35% of the copepod faecal pellet production was retained within the euphotic zone. The POC: PON (particulate organic nitrogen) ratio of the suspended material in the euphotic zone (8.1 +/- 0.4) was comparable to that of the material collected in the sediment traps just below the euphotic zone (8.0 +/- 0.9). In addition, the daily loss rates of POC and PON within each sampling depth were similar, and the carbon to nitrogen ratio in the sediment traps did not change with depth. These results indicate that the pelagic system had a low retention efficiency of nitrogen just after the spring bloom.
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| 20. |
- Kiorboe, Thomas, et al.
(författare)
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Havets dufte
- 2013
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Ingår i: Aktuel naturvidenskab. - 1399-2309 .- 1602-3544. ; :3, s. 30-33
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
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| 21. |
- Lindström, Jenny, 1978, et al.
(författare)
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Effects of predator lipids on dinoflagellate defence mechanisms - increased bioluminescence capacity
- 2017
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Ingår i: Scientific Reports. - : Springer Science and Business Media LLC. - 2045-2322. ; 7
-
Tidskriftsartikel (refereegranskat)abstract
- Short flashes of blue light (bioluminescence) from dinoflagellates can reduce copepod grazing of light-emitting cells. Other protective strategies against grazing are toxicity, reduced cell chain length and altered swimming patterns in different phytoplankton. Both toxicity and bioluminescence capacity in dinoflagellates decrease in copepod-free cultures, but toxin production can be restored in response to chemical alarm signals from copepods, copepodamides. Here we show that strains of the dinoflagellates Lingulodinium polyedra and Alexandrium tamarense, kept in culture for 14 and 9 years respectively, are capable of increasing their total bioluminescence capacity in response to copepodamides. The luminescence response to mechanical stimulation with air bubbles also increases significantly in L. polyedra after exposure to copepodamides. Effects on size, swimming speed and rate of change of direction in L. polyedra and A. tamarense were not detected, suggesting that post-encounter mechanisms such as bioluminescence and toxin production may constitute the dominating line of defence in these taxa. To our knowledge, this study provides the first evidence of changes in bioluminescence physiology as a response to chemical cues from natural enemies and emphasizes the importance of bioluminescence as an anti-grazing strategy.
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| 22. |
- Lombard, F., et al.
(författare)
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Active prey rejection in the filter-feeding appendicularian Oikopleura dioica
- 2011
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Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590. ; 56:4, s. 1504-1512
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Tidskriftsartikel (refereegranskat)abstract
- We describe different modes of prey rejection in a filter-feeding appendicularian, Oikopleura dioica. Nonselective prey rejection occurs by intermittent rejection through reversal of the feeding current of all particles when the pharyngeal filter is overloaded, AND by accidental loss through the spiracles of all particles that have entered the house when the pharyngeal filter occasionally breaks. In addition, selective prey rejection of individual particles may occur in the mouth by reversal of the ciliary current in the spiracle: the unwanted particle is expelled with a small amount of water. Up to four rejections of individual particles may occur per second. This active rejection is based on both the size and the chemical characteristics of the individual particle. A significantly higher rejection rate was found for toxic dinoflagelate (68%) compared to similar sized nontoxic ones (34%); exponentially growing algae were less rejected than senescent ones; and nutrient-depleted algae were more rejected than nutrient-replete cells. For nontoxic particles, prey size relative to the size of the appendicularian was the main prey selection criterion and the optimal prey size (> 80% acceptance) for O. dioica is between 0.4% and 2% of their own size, whereas the minimum and maximum particle sizes that they can ingest range from 0.04% to 20% of their own size. This prey size spectrum is much broader than that found in most other planktivorous organisms and demonstrates that appendicularians are simultaneous microphageous and macrophageous planktonic grazers. © 2011, by the American Society of Limnology and Oceanography, Inc.
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| 23. |
- Lundholm, N., et al.
(författare)
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Induction of domoic acid production in diatoms-Types of grazers and diatoms are important
- 2018
-
Ingår i: Harmful Algae. - : Elsevier BV. - 1568-9883. ; 79, s. 64-73
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Tidskriftsartikel (refereegranskat)abstract
- Grazers can induce toxin (domoic acid, DA) production in diatoms. The toxic response has been observed in two species of Pseudo-nitzschia and was induced by Calanus copepods. In this study, interactions between diatoms and copepods were further explored using different species of diatoms and copepods. All herbivorous copepods induced toxin production, whereas exposure to carnivorous copepods did not. In line with this, increasing the number of herbivorous copepods resulted in even higher toxin production. The induced response is thus only elicited by copepods that pose a real threat to the responding cells, which supports that the induced toxin production in diatoms evolved as an inducible defense. The cellular toxin content in Pseudo-nitzschia was positively correlated to the concentration of a group of specific polar lipids called copepodamides that are excreted by the copepods. This suggests that copepodamides are the chemical cues responsible for triggering the toxin production. Carnivorous copepods were found to produce less or no copepodamides. Among the diatoms exposed to grazing herbivorous copepods, only two of six species of Pseudo-nitzschia and none of the Nitzschia or Fragilariopsis strains responded by producing DA, indicating that not all Pseudo-nitzschia species/strains are able to produce DA, and that different diatom species might have different strategies for coping with grazing pressure. Growth rate was negatively correlated to cellular domoic acid content indicating an allocation cost associated with toxin production. Long-term grazing experiments showed higher mortality rates of grazers fed toxic diatoms, supporting the hypothesis that DA production is an induced defense mechanism.
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| 24. |
- Prevett, Andrew, et al.
(författare)
-
Grazer-induced bioluminescence gives dinoflagellates a competitive edge
- 2019
-
Ingår i: Current Biology. - : Elsevier BV. - 0960-9822 .- 1879-0445. ; 29:12
-
Tidskriftsartikel (refereegranskat)abstract
- Bioluminescent dinoflagellates grow at one third the rate of their competitors of equivalent size, such as diatoms [1]. Despite this disadvantage, dinoflagellates successfully persist within phytoplankton communities and even form large blooms during favourable conditions. One explanation for this paradox is that bioluminescence acts as a defence that reduces losses to zooplankton grazers, such as copepods 2, 3. Lindström et al. [4] found that the dinoflagellate Lingulodinium polyedra (F.Stein) J.D.Dodge increase their bioluminescence in response to copepodamides [5], polar lipids exuded by copepod grazers, allowing for a brighter flash when bioluminescent capacity is stimulated. Here, we show that copepodamide-induced bioluminescence in L. polyedra causes a marked shift in the grazing preference of the copepod Acartia tonsa Dana. L. polyedra goes from being the preferred prey when non-bioluminescent to near complete rejection when pre-treated with copepodamides to induce a higher bioluminescent capacity. High-speed and low-light-sensitive videos show how L. polyedra cells flash upon contact with the copepod and are subsequently rejected, seemingly unharmed (Videos S1 and S2). Instead, A. tonsa shows compensatory feeding on the alternative prey.
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| 25. |
- Rigby, Kristie, 1987, et al.
(författare)
-
Predatory cues drive colony size reduction in marine diatoms
- 2021
-
Ingår i: Ecology and Evolution. - : Wiley. - 2045-7758. ; 11:16, s. 11020-11027
-
Tidskriftsartikel (refereegranskat)abstract
- Colony formation is a common feature among nonmotile marine phytoplankton. Several theories exist around the potential benefits of larger colonies. Here, we test the hypothesis that predation is one of the drivers behind colony formation and chain length plasticity. We exposed cultures of Thalassiosira rotula, Chaetoceros curvisetus, and Chaetoceros affinis to copepodamides, a chemical alarm cue released by copepods and perceived as an indicator of predation threat by their prey. This was coupled with a grazing experiment, which compared copepod grazing rates on different chain lengths. Our results show that T. rotula and C. curvisetus decreased their chain lengths by 79% and 49%, respectively, in response to copepodamides. Single cells and short chains were grazed at lower rates compared with long chains, and the copepodamide-driven size shift led to 30% and 12% lower grazing in T. rotula and C. curvisetus, respectively. In contrast, C. affinis showed a slight increased chain length in response to copepodamides although nonsignificant. We found that 2 of 3 studied species reduce their chain length in response to the presence of copepod grazers. Altered size structure has implications for the route of carbon in the marine food webs and carbon export to deeper strata.
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| 26. |
- Rigby, Kristie, 1987, et al.
(författare)
-
Species Specific Responses to Grazer Cues and Acidification in Phytoplankton- Winners and Losers in a Changing World
- 2022
-
Ingår i: Frontiers in Marine Sceince. - : Frontiers Media SA. - 2296-7745. ; 9
-
Tidskriftsartikel (refereegranskat)abstract
- Phytoplankton induce defensive traits in response to chemical alarm signals from grazing zooplankton. However, these signals are potentially vulnerable to changes in pH and it is not yet known how predator recognition may be affected by ocean acidification. We exposed four species of diatoms and one toxic dinoflagellate to futurepCO2levels, projected by the turn of the century, in factorial combinations with predatory cues from copepods (copepodamides). We measured the change in growth, chain length, silica content, and toxin content. Effects of increasedpCO2were highly species specific. The induction of defensive traits was accompanied by a significant reduction in growth rate in three out of five species. The reduction averaged 39% and we interpret this as an allocation cost associated with defensive traits. Copepodamides induced significant chain length reduction in three of the four diatom species. Under elevatedpCO2Skeletonema marinoireduced silica content by 30% and inAlexandrium minutumthe toxin content was reduced by 30%. Using copepodamides to induce defensive traits in the absence of direct grazing provides a straightforward methodology to assess costs of defense in microplankton. We conclude that copepodamide signalling system is likely robust to ocean acidification. Moreover, the variable responses of different taxa to ocean acidification suggest that there will be winners and losers in a highpCO2world, and that ocean acidification may have structuring effects on phytoplankton communities.
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| 27. |
- Robinson, N. A., et al.
(författare)
-
Applying genetic technologies to combat infectious diseases in aquaculture
- 2022
-
Ingår i: Reviews in Aquaculture. - : Wiley. - 1753-5123 .- 1753-5131. ; 15:2, s. 491-535
-
Tidskriftsartikel (refereegranskat)abstract
- Disease and parasitism cause major welfare, environmental and economic concerns for global aquaculture. In this review, we examine the status and potential of technologies that exploit genetic variation in host resistance to tackle this problem. We argue that there is an urgent need to improve understanding of the genetic mechanisms involved, leading to the development of tools that can be applied to boost host resistance and reduce the disease burden. We draw on two pressing global disease problems as case studies—sea lice infestations in salmonids and white spot syndrome in shrimp. We review how the latest genetic technologies can be capitalised upon to determine the mechanisms underlying inter- and intra-species variation in pathogen/parasite resistance, and how the derived knowledge could be applied to boost disease resistance using selective breeding, gene editing and/or with targeted feed treatments and vaccines. Gene editing brings novel opportunities, but also implementation and dissemination challenges, and necessitates new protocols to integrate the technology into aquaculture breeding programmes. There is also an ongoing need to minimise risks of disease agents evolving to overcome genetic improvements to host resistance, and insights from epidemiological and evolutionary models of pathogen infestation in wild and cultured host populations are explored. Ethical issues around the different approaches for achieving genetic resistance are discussed. Application of genetic technologies and approaches has potential to improve fundamental knowledge of mechanisms affecting genetic resistance and provide effective pathways for implementation that could lead to more resistant aquaculture stocks, transforming global aquaculture. © 2022 The Authors. Reviews in Aquaculture published by John Wiley & Sons Australia, Ltd.
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| 28. |
- Rosenberg, Rutger, 1943, et al.
(författare)
-
Alarm signal response in the brittle star Amphiura filiformis
- 2000
-
Ingår i: Marine Biology. ; 136:1, s. 43-48
-
Tidskriftsartikel (refereegranskat)abstract
- Flat fishes, such as the dab Limanda limanda, commonly prey on arms of Amphiura filiformis. We demonstrate in flume experiments that A. filiformis showed a more or less simultaneous response to an upstream predation by dab on conspecifics: the arms, which are stretched up into the water column when filter feeding, responded by bending down to the sediment surface, and some arms submerged, at least partly, into the sediment. We interpret this as an alarm response. A similar, but significantly weaker response in A. filiformis was also recorded when dab ate Amphiura chiajei. Homogenates of the two Amphiura species and arm pinching - to simulate partial predation - elicited a similar response in A. filiformis, the arms bent to the sediment surface. In contrast, however, the behavioural response of the arms to the homogenates was to protrude further out of the sediment and sweep the surface vigorously. We interpret this as a feeding behaviour. Response to arm pinching was less clear. The ecological consequences and origin of alarm signal response in A. filiformis are discussed.
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| 29. |
- Ryderheim, F., et al.
(författare)
-
Predator-induced defence in a dinoflagellate generates benefits without direct costs
- 2021
-
Ingår i: Isme Journal. - : Springer Science and Business Media LLC. - 1751-7362 .- 1751-7370. ; 15, s. 2107-2116
-
Tidskriftsartikel (refereegranskat)abstract
- Inducible defences in phytoplankton are often assumed to come at a cost to the organism, but trade-offs have proven hard to establish experimentally. A reason for this may be that some trade-off costs only become evident under resource-limiting conditions. To explore the effect of nutrient limitation on trade-offs in toxin-producing dinoflagellates, we induced toxin production in Alexandrium minutum by chemical cues from copepods under different levels of nitrogen limitation. The effects were both nitrogen- and grazer-concentration dependent. Induced cells had higher cellular toxin content and a larger fraction of the cells was rejected by a copepod, demonstrating the clear benefits of toxin production. Induced cells also had a higher carbon and nitrogen content, despite up to 25% reduction in cell size. Unexpectedly, induced cells seemed to grow faster than controls, likely owing to a higher specific nutrient affinity due to reduced size. We thus found no clear trade-offs, rather the opposite. However, indirect ecological costs that do not manifest under laboratory conditions may be important. Inducing appropriate defence traits in response to threat-specific warning signals may also prevent larger cumulative costs from expressing several defensive traits simultaneously.
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| 30. |
- Saha, M., et al.
(författare)
-
Using chemical language to shape future marine health
- 2019
-
Ingår i: Frontiers in Ecology and the Environment. - : Wiley. - 1540-9295 .- 1540-9309. ; 17:9, s. 530-537
-
Tidskriftsartikel (refereegranskat)abstract
- "Infochemicals" (information-conveying chemicals) dominate much of the underwater communication in biological systems. They influence the movement and behavior of organisms, the ecological interactions between and across populations, and the trophic structure of marine food webs. However, relative to their terrestrial equivalents, the wider ecological and economic importance of marine infochemicals remains understudied and a concerted, cross-disciplinary effort is needed to reveal the full potential of marine chemical ecology. We highlight current challenges with specific examples and suggest how research on the chemical ecology of marine organisms could provide opportunities for implementing new management solutions for future "blue growth" (the sustainable use of ocean resources) and maintaining healthy marine ecosystems.
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| 31. |
|
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| 32. |
- Selander, Erik, 1973, et al.
(författare)
-
Chemical signaling in the turbulent ocean-hide and seek at the Kolmogorov scale
- 2020
-
Ingår i: Fluids. - : MDPI AG. - 2311-5521. ; 5:2
-
Tidskriftsartikel (refereegranskat)abstract
- Chemical cues and signals mediate resource acquisition, mate finding, and the assessment of predation risk in marine plankton. Here, we use the chemical properties of the first identified chemical cues from zooplankton together with in situ measurements of turbulent dissipation rates to calculate the effect of turbulence on the distribution of cues behind swimmers as well as steady state background concentrations in surrounding water. We further show that common zooplankton (copepods) appears to optimize mate finding by aggregating at the surface in calm conditions when turbulence do not prevent trail following. This near surface environment is characterized by anisotropic turbulence and we show, using direct numerical simulations, that chemical cues distribute more in the horizontal plane than vertically in these conditions. Zooplankton may consequently benefit from adopting specific search strategies near the surface as well as in strong stratification where similar flow fields develop. Steady state concentrations, where exudation is balanced by degradation develops in a time scale of ~5 h. We conclude that the trails behind millimeter-sized copepods can be detected in naturally occurring turbulence below the wind mixed surface layer or in the absence of strong wind. The trails, however, shorten dramatically at high turbulent dissipation rates, above ~10−3 cm2 s−3 (10−7 W kg−1). © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
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| 33. |
- Selander, Erik, 1973, et al.
(författare)
-
Copepods drive large-scale trait-mediated effects in marine plankton
- 2019
-
Ingår i: Science Advances. - : American Association for the Advancement of Science (AAAS). - 2375-2548. ; 5
-
Tidskriftsartikel (refereegranskat)abstract
- Copyright © 2019 The Authors. Fear of predation may influence food webs more than actual predation. However, the mechanisms and magnitude of nonconsumptive predator effects are largely unknown in unicellular-dominated food webs such as marine plankton. We report a general mechanism of chemically induced predator effects in marine plankton. Copepods, the most abundant zooplankton in the oceans, imprint seawater with unique polar lipids—copepodamides—which trigger toxin production and bioluminescence in harmful dinoflagellates. We show that copepodamides also elicit defensive traits in other phytoplankton, inducing the harmful algal bloom-forming diatom Pseudo-nitzschia seriata to produce 10 times more toxins, and colony-forming diatoms to decrease colony size by half. A 1-year study in the northeast Atlantic revealed that natural copepodamide concentrations are high enough to induce harmful algal toxins and size reduction in dominant primary producers when copepods are abundant. We conclude that copepodamides will structure marine plankton toward smaller, more defended life forms on basin-wide scales.
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| 34. |
- Selander, Erik, 1973, et al.
(författare)
-
Effects of food concentration on the behaviour of Oikopleura dioica
- 2003
-
Ingår i: Marine Biology. - 0025-3162. ; 142:2, s. 263-270
-
Tidskriftsartikel (refereegranskat)abstract
- Feeding behaviour of the pelagic tunicate Oikopleura dioica presented with a range of food concentrations (FC, 4-670 mug Cl-1) of the flagellate Isochrysis galbana was observed using video. Simultaneous bottle incubations provided clearance rate estimates. Tail beats per minute (TB), number of tail arrests or pauses (TA) and swimming speeds were recorded. TB decreased with increasing FC, from 521 to 355 min(-1), while TA increased from 17 to 35 min(-1). Aberrant behaviour with repeated TA was found if inlet filters were obstructed by larger particles or aquarium walls. Swimming speed was 1.0 0.4 mm s(-1), and the time spent swimming decreased with FC from 38 % to 11% of the time. Clearance rate decreased sharply with FC, from 4.3 to 0.11 ml ind(-1) h(-1), resembling a type II functional response with Michaelis-Menten parameters I-max = 113 mug C ind(-1) h(-1) and K-m = 27 mug Cl-1. Using TB, TA and a residual error term, a simple model to predict clearance rate from behavioural parameters was developed. Power functions of FC were fitted to each parameter, resulting in exponents of -0.047, -0.183 and -0.38, respectively. The error term includes passive clogging and food rejection at the mouth, and was according to the model the most important for shaping the functional response.
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| 35. |
- Selander, Erik, 1973, et al.
(författare)
-
Effects of nitrate and phosphate on grazer-induced toxin production in Alexandrium minutum
- 2008
-
Ingår i: Limnology & Oceanography. ; 53:2, s. 423-530
-
Tidskriftsartikel (refereegranskat)abstract
- Two strains of Alexandrium minutum were exposed to waterborne cues from copepod grazers in factorial combinations of nitrate and phosphate concentrations to evaluate the importance of grazer-induced paralytic shellfish toxin (PST) production under different nutrient regimes. In nitrate-rich treatments, the presence of waterborne cues from grazers resulted in significantly increased cell-specific PST content. In low nitrate treatments, however, waterborne cues from grazers did not result in any detectable increase in cell-specific PST content. The grazer-induced increase in cell-specific PST content in nitrate-rich treatments was comparable in size to the effects of nitrate in the absence of grazers. Effects of phosphate limitation were less consistent, resulting in increased PST content in nitrate-rich treatments in one of the A. minutum strains, but had no significant effect in the other. The ability of dinoflagellates to sense and respond to the presence of grazers by increased PST production may be one of the most important factors affecting cell-specific PST content under nitrogen replete conditions.
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| 36. |
- Selander, Erik, 1973, et al.
(författare)
-
Fight and flight in dinoflagellates? Kinetics of simultaneous grazer-induced responses in Alexandrium tamarense
- 2012
-
Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 57:1, s. 58-64
-
Tidskriftsartikel (refereegranskat)abstract
- We monitored the kinetics of grazer-induced responses in the marine dinoflagellate Alexandrium tamarense. Chemical cues from each of three calanoid copepods (Calanus sp., Centropages typicus, and Acartia tonsa) induced increased toxicity and suppressed chain formation in A. tamarense. Both chemical and morphological responses augmented over 3 d. Toxicity subsequently averaged 299% higher than controls, and average biovolume 24% lower than controls because of suppression of chain formation in grazed treatments. Grazer-induced toxicity returned to control levels after approximately 11 d, equivalent to five cell divisions, and average biovolume returned to control levels within 1 to 4 d (one to two cell divisions). This suggests that dinoflagellates simultaneously reduce grazer encounter rates and increase chemical defense levels in the presence of copepod grazers. Media replacement experiments showed that the inducing cue(s) attenuate rapidly in seawater, which allows A. tamarense to adjust resource allocation to grazer-induced responses to follow fluctuations in grazer density. Grazer-induced responses, however, develop too slowly to be accounted for in short-term grazing experiments with laboratory cultures.
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| 37. |
- Selander, Erik, 1973, et al.
(författare)
-
Grazer cues induce stealth behavior in marine dinoflagellates
- 2011
-
Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 108:10, s. 4030-4034
-
Tidskriftsartikel (refereegranskat)abstract
- Chain formation is common among phytoplankton organisms but the underlying reasons and consequences are poorly understood. Here we show that chain formation is strongly impaired by waterborne cues from copepod grazers in the dinoflagellate Alexandrium tamarense. Chains of Alexandrium cells exposed to copepod cues responded by splitting into single cells or shorter chains. Motion analysis revealed significantly lower swimming velocities for single cells compared with chains, with two- to fivefold higher simulated predator encounter rates for two- and four-cell chains, respectively. In addition, the few remaining two-cell chains in grazed treatments were swimming at approximately half the speed of two-cell chains in treatments without grazers, which reduced encounter rates with grazers to values similar to that of single cells. Chain length plasticity and swimming behavior constitute unique mechanisms to reduce encounters with grazers. We argue that dinoflagellates can regulate the balance between motility and predator avoidance by adjusting chain length. The high predator encounter rate for motile chains may have contributed to the low prevalence of chain formation in motile phytoplankton compared with in nonmotile phytoplankton where chain formation is more common.
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| 38. |
- Selander, Erik, 1973, et al.
(författare)
-
Hydrodynamic properties and distribution of bait downstream of a zooplankton trap
- 2017
-
Ingår i: Journal of Plankton Research. - : Oxford University Press (OUP). - 0142-7873 .- 1464-3774. ; 39:6, s. 1020-1027
-
Tidskriftsartikel (refereegranskat)abstract
- The flow regime around a chemically baited trap is crucial for the trapping process and distribution of bait downstream of traps. We measured the flow field downstream of a trap prototype in flume experiments and mapped the distribution of bait using laser induced fluorescence. The trap produced a downstream wake, where flow recirculated towards the trap, allowing organisms slower than the free stream flow to interact with the trap. The chemical tracer revealed an average gradient with increasing concentrations towards the trap. Finally, we evaluated trap performance in field experiments. Traps with internal light caught on average 3.4 times more zooplankton than traps without light in short-term deployments (1 h). Trapping efficiency could be manipulated by chemical stimuli; A piece of fish (Salmo salar) inside traps deterred 79% of the zooplankton compared to traps without fish. We conclude that the flow regime around a cylindrical trap may facilitate trapping and that combined stimuli modalities may allow higher selectivity. The effective radius of the trap will depend on the surrounding flow and will likely be small when flow-rate exceeds swimming speed of targeted organisms. Finally, we propose applications for selective traps in aquaculture and pest management.
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| 39. |
- Selander, Erik, 1973, et al.
(författare)
-
Parasitic anemone infects the invasive ctenophore Mnemiopsis leidyi in the North East Atlantic
- 2010
-
Ingår i: Biological invasions. - : Springer Science and Business Media LLC. - 1387-3547 .- 1573-1464. ; 12:5, s. 1003-1009
-
Tidskriftsartikel (refereegranskat)abstract
- We report of the first finding of parasitic sea anemone larvae infecting the invasive ctenophore Mnemiopsis leidyi in the North East Atlantic. Parasitic anemone larvae are common in the native habitat of Mnemiopsis, but have not previously been reported from any of the locations where Mnemiopsis has been introduced. General morphology and 18S rRNA sequences support the identification of the larvae as Edwardsiella sp. Excised anemone larvae were reared through metamorphosis and confirmed the identification of the parasite. Both Mnemiopsis and Edwardsiella larvae were monitored weekly during 2007 and 2008 and parasitic larvae were recorded from September to November both years. The highest density was observed in September 2008 when Edwardsiidae larvae reached 2.3 ind m(-3). In 2008 total density of the parasite occasionally exceeded 40% of the host density and the potential consequences for Mnemiopsis population dynamics are discussed.
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| 40. |
- Selander, Erik, 1973, et al.
(författare)
-
Predator lipids induce paralytic shellfish toxins in bloom-forming algae
- 2015
-
Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 112:20, s. 6395-6400
-
Tidskriftsartikel (refereegranskat)abstract
- Interactions among microscopic planktonic organisms underpin the functioning of open ocean ecosystems. With few exceptions, these organisms lack advanced eyes and thus rely largely on chemical sensing to perceive their surroundings. However, few of the signaling molecules involved in interactions among marine plankton have been identified. We report a group of eight small molecules released by copepods, the most abundant zooplankton in the sea, which play a central role in food webs and biogeochemical cycles. The compounds, named copepodamides, are polar lipids connecting taurine via an amide to isoprenoid fatty acid conjugate of varying composition. The bloom-forming dinoflagel-late Alexandrium minutum responds to pico- to nanomolar concentrations of copepodamides with up to a 20-fold increase in production of paralytic shellfish toxins. Different copepod species exude distinct copepodamide blends that contribute to the species-specific defensive responses observed in phytoplankton. The signaling system described here has far reaching implications for marine ecosystems by redirecting grazing pressure and facilitating the formation of large scale harmful algal blooms.
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| 41. |
- Selander, Erik, 1973, et al.
(författare)
-
Solid phase extraction and metabolic profiling of exudates from living copepods
- 2016
-
Ingår i: Peerj. - : PeerJ. - 2167-8359. ; 4
-
Tidskriftsartikel (refereegranskat)abstract
- Copepods are ubiquitous in aquatic habitats. They exude bioactive compounds that mediate mate finding or induce defensive traits in prey organisms. However, little is known about the chemical nature of the copepod exometabolome that contributes to the chemical landscape in pelagic habitats. Here we describe the development of a closed loop solid phase extraction setup that allows for extraction of exuded metabolites from live copepods. We captured exudates from male and female Temora longicornis and analyzed the content with high resolution LC-MS. Chemometric methods revealed 87 compounds that constitute a specific chemical pattern either qualitatively or quantitatively indicating copepod presence. The majority of the compounds were present in both female and male exudates, but nine compounds were mainly or exclusively present in female exudates and hence potential pheromone candidates. Copepodamide G, known to induce defensive responses in phytoplankton, was among the ten compounds of highest relative abundance in both male and female extracts. The presence of copepodamide G shows that the method can be used to capture and analyze chemical signals from living source organisms. We conclude that solid phase extraction in combination with metabolic profiling of exudates is a useful tool to develop our understanding of the chemical interplay between pelagic organisms.
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| 42. |
- Sjoqvist, C., et al.
(författare)
-
Effects of Grazer Presence on Genetic Structure of a Phenotypically Diverse Diatom Population
- 2014
-
Ingår i: Microbial Ecology. - : Springer Science and Business Media LLC. - 0095-3628 .- 1432-184X. ; 67:1, s. 83-95
-
Tidskriftsartikel (refereegranskat)abstract
- Studies of predator-prey systems in both aquatic and terrestrial environments have shown that grazers structure the intraspecific diversity of prey species, given that the prey populations are phenotypically variable. Populations of phytoplankton have traditionally considered comprising only low intraspecific variation, hence selective grazing as a potentially structuring factor of both genetic and phenotypic diversity has not been comprehensively studied. In this study, we compared strain specific growth rates, production of polyunsaturated aldehydes, and chain length of the marine diatom Skeletonema marinoi in both grazer and non-grazer conditions by conducting monoclonal experiments. Additionally, a mesocosm experiment was performed with multiclonal experimental S. marinoi populations exposed to grazers at different levels of copepod concentration to test effects of grazer presence on diatom diversity in close to natural conditions. Our results show that distinct genotypes of a geographically restricted population exhibit variable phenotypic traits relevant to grazing interactions such as chain length and growth rates. Grazer presence affected clonal richness and evenness of multiclonal Skeletonema populations in the mesocosms, likely in conjunction with intrinsic interactions among the diatom strains. Only the production of polyunsaturated aldehydes was not affected by grazer presence. Our findings suggest that grazing can be an important factor structuring diatom population diversity in the sea and emphasize the importance of considering clonal differences when characterizing species and their role in nature.
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| 43. |
- Smith, B.C., et al.
(författare)
-
Toxin profile change in vegetative cells and pellicle cysts of Alexandrium fundyense after gut passage in the eastern oyster Crassostrea virginica
- 2011
-
Ingår i: Aquatic biology. - : Inter-Research Science Center. - 1864-7790 .- 1864-7782. ; 13:2, s. 193-201
-
Tidskriftsartikel (refereegranskat)abstract
- Abstract: Vegetative cells and pellicle cysts of the toxic dinoflagellate Alexandrium fundyense Balech were fed to the eastern oyster Crassostrea virginica Gmelin under controlled conditions. Para lytic shellfish toxins (PSTs) were measured in vegetative cells and pellicle cysts prior to feeding and directly after passage through the oyster alimentary canal and defecation as intact cells. Oysters fed with vegetative cells and those fed with pellicle cysts accumulated toxins. One experimental treatment tested for direct uptake of toxins from the water (oysters and A. fundyense cells were separated by a screen); PSTs were not accumulated from the water by the oysters. There were no significant changes in total, per-cell toxicity after passage through the oyster alimentary canal, suggesting limited transfer of toxins from intact cells to the oysters. However, there were statistically significant changes in the toxin composition of cells following gut passage. Vegetative cells and pellicle cysts from feces had increased amounts of saxitoxin (STX) and decreased amounts of gonyautoxin 4 (GTX4) per cell, compared to amounts prior to gut passage. Following gut passage, pellicle cysts showed better survival in the feces than vegetative cells, which is consistent with the view of pellicle-cyst formation as a successful survival strategy against adverse conditions.
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| 44. |
- Sundbäck, Kristina, 1949, et al.
(författare)
-
Importance of benthic nutrient regeneration during initiation of macroalgal blooms in shallow bays
- 2003
-
Ingår i: Marine Ecology-Progress Series. - : Inter-Research Science Center. - 0171-8630 .- 1616-1599. ; 246, s. 115-126
-
Tidskriftsartikel (refereegranskat)abstract
- Fast growing ephemeral algae are increasingly observed in shallow coastal waters worldwide. This is generally considered a symptom of coastal eutrophication. It has been suggested that the reoccurrence of macroalgal mats, despite ongoing efforts to decrease nutrient loadings, may be explained by the fact that sheltered bays function as self-regenerating systems through benthic regeneration of nutrients. The importance of benthic nutrient regeneration during the initiation of the growth of filamentous green algal mats was investigated in 2 shallow-water bays on the west coast of Sweden. Nutrient regeneration was assessed in situ and in the laboratory, using sediment-water light/dark incubations and pore water distribution patterns. Benthic efflux of inorganic nutrients could supply up to 55 to 100% of the estimated nitrogen demand and 30 to 70% of the phosphorus requirements for the initial macroalgal growth from May to June. However, the availability of the pore water nutrient pool was influenced by the amount and functional type of infauna, and by competition from microphytobenthos. Because of the internal nutrient source of the embayments, it is suggested that there may be a significant time lag between a decreased nutrient supply to coastal waters and improved conditions of shallow water embayments.
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| 45. |
|
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| 46. |
- Thor, Peter, 1965, et al.
(författare)
-
Post-spring bloom community structure of pelagic copepods in the Disko Bay, Western Greenland
- 2005
-
Ingår i: Journal of Plankton Research. - : Oxford University Press (OUP). - 0142-7873 .- 1464-3774. ; 27:4, s. 341-356
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Tidskriftsartikel (refereegranskat)abstract
- Community structure of pelagic copepods was investigated in the upper 200 m in the Disko Bay, Western Greenland, during the post-spring bloom period in June, 2001. This was the first study of the copepod community in West Greenland coastal waters sampled using smaller mesh sizes (50 mu m as opposed to 200 mu m). The mesozooplankton was dominated by copepods who constituted 82% of the total abundance and 95% of the total mesozooplankton biomass (> 50 mu m). Nauplii of Calanus, Pseudocalanus and Oithona dominated by number and the copepodites and adults were dominated by Oithona spp., Oncaea sp., Pseudocalanus sp., harpacticoids, Calanus finmarchicus, C. glacialis, and C. hyperboreus. Multivariate tests showed that the species/stage abundance composition of copepods changed significantly with depth. With one exception, all depth intervals showed unique significantly different compositions. Accordingly, the copepod community structure was influenced primarily by depth rather than by chlorophyll a concentration. Factors other than herbivorous grazing, such as omnivory, predator avoidance or association to marine snow aggregates of specific species, may have influenced the depth distribution of the total copepod community in the Disko Bay. Nevertheless, subsequent Pearson product moment correlations showed positive significant correlations between the vertical distribution of the three Calanus spp. and Pseudocalanus spp. and chlorophyll a concentrations, which points towards these species as prime components in the classic diatom-copepod food chain.
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| 47. |
- Trapp, Aubrey, et al.
(författare)
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Eavesdropping on plankton-can zooplankton monitoring improve forecasting of biotoxins from harmful algae blooms?
- 2021
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Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 66:9, s. 3455-3471
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Tidskriftsartikel (refereegranskat)abstract
- Harmful algae bloom (HAB) forecasting has developed rapidly over recent decades, but predicting harmful levels of marine biotoxins in shellfish is still a challenge. New discoveries suggest that predator-prey interactions may be an important driver in the formation of HABs. Key species of harmful algae respond to copepod infochemicals with increased toxin production. In addition, copepods feed selectively on less defended prey, which may further promote harmful taxa. Here we explore if eavesdropping on predator-prey dynamics by monitoring zooplankton can improve HAB forecasting. We first examine an 8-yr time series including copepod biomass, harmful algae cells (Dinophysis spp.), and diarrhetic shellfish toxins in blue mussels (Mytilus edulis) using generalized additive models. Models including copepod biomass more accurately predicted okadaic acid in mussels than phytoplankton alone. We then apply this connection more narrowly by analyzing the specific copepod exudates known to induce toxin production, copepodamides, from the mussels sampled in biotoxin monitoring. Adding copepodamide data from shellfish extracts increased model performance compared to copepod biomass. Results suggest that including grazing effects through copepodamide measurements may provide a cost-efficient way to improve accuracy and lead time for predicting the accumulation of microalgal toxins in shellfish.
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| 48. |
- Wohlrab, S., et al.
(författare)
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Predator cues reduce intraspecific trait variability in a marine dinoflagellate
- 2017
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Ingår i: Bmc Ecology. - : Springer Science and Business Media LLC. - 1472-6785. ; 17:1
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Tidskriftsartikel (refereegranskat)abstract
- Background: Phenotypic plasticity is commonplace and enables an organism to respond to variations in the environment. Plastic responses often modify a suite of traits and can be triggered by both abiotic and biotic changes. Here we analysed the plastic response towards a grazer of two genotypes of the marine dinoflagellate Alexandrium fundyense, evaluated the similarity of this response and discuss potential strain-specific trade-offs. We compared the expression of the known inducible defensive traits paralytic shellfish toxin content, and chain length. The effectiveness of the induced defense was assessed by monitoring grazing rates in both strains. Results: Our results show that the grazer cues diminish phenotypic variability in a population by driving the phenotype towards a common defended morphotype. We further showed that the expression of the sxtA gene that initiates the paralytic shellfish toxin biosynthesis pathway does not correlate with an observed increase in the paralytic shellfish toxin analogue saxitoxin, and that toxin induction differs in its physiological characteristics in both strains. Conclusion: Induced defense response in Alexandrium thus can directly affect further species interactions by reducing phenotypic variation and can result in genotype-dependent ecological trade-offs. © 2017 The Author(s).
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| 49. |
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