| 1. |
- Arneth, Almut, et al.
(author)
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Spring in the boreal environment: observations on pre- and post-melt energy and CO2 fluxes in two central Siberian ecosystems
- 2006
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In: Boreal Environment Research: An International Interdisciplinary Journal. - 1239-6095. ; 11:4, s. 311-328
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Journal article (peer-reviewed)abstract
- A range of observations points towards earlier onset of spring in northern high latitudes. However, despite the profound effects this may have on vegetation-atmosphere exchange of carbon (NEE), vegetation-atmosphere physical coupling, or the location of the tundra-taiga interface, the number of studies that investigate winter-spring transition fluxes in contrasting northern vegetation types is limited. Here, we examine spring ecosystem-atmosphere energy and carbon exchange in a Siberian pine forest and mire. Divergent surface albedo before and during snow-melt resulted in daytime net radiation (R-n) above the forest exceeding R. above the mire by up to 10 MJ m(-2). Until stomata could open, absorbed radiation by the green pine canopy caused substantial daytime sensible heat fluxes (H > 10 MJ m(-2)). H above the mire was very low, even negative (<-2 MJ M-2), during that same period. Physiological activity in both ecosystems responded rapidly to warming temperatures and snow-melt, which is essential for survival in Siberia with its very short summers. On days with above-zero temperatures, before melt. was complete, low rates of forest photosynthesis (1-2 mu mol m(-2) s(-1)) were discernible. Forest and mire NEE became negative the same day, or shortly after, photosynthesis commenced. The mire lagged by about two weeks behind the forest and regained its full carbon uptake capacity at a slower rate. Our data provide empirical evidence for the importance the timing of spring and the relative proportion of forest vs. mire has for late winter/spring boundary-layer growth, and production and surface-atmosphere mixing of trace gases. Models that seek to investigate effects of increasingly earlier spring in high latitudes must correctly account for contrasting physical and biogeochemical ecosystem-atmosphere exchange in heterogeneous landscapes.
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| 2. |
- Cai, Guan, et al.
(author)
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Root exudates with low C/N ratios accelerate CO2 emissions from paddy soil
- 2022
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In: Land Degradation and Development. - : Wiley. - 1099-145X .- 1085-3278. ; 33:8, s. 1193-1203
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Journal article (peer-reviewed)abstract
- Root exudates can significantly modify microbial activity and soil organic matter (SOM) mineralization. However, how root exudates and their C/N stoichiometric ratios control paddy soil C mineralization is poorly understood. This study used a mixture of glucose, oxalic acid, and alanine as root exudate mimics for three C/N stoichiometric ratios (CN6, CN10, and CN80) to explore the underlying mechanisms involved in SOM mineralization. The input of root exudates enhanced CO2 emissions by 1.8–2.3-fold that of soil with only C additions (C-only). Artificial root exudates with low C/N ratios (CN6 and CN10) increased the metabolic quotient (qCO2) by 12% over those with higher stoichiometric ratios (CN80 and C-only), suggesting a relatively high energy demand for microorganisms to acquire organic N from SOM by increasing N-hydrolase production. The increase of stoichiometric ratios of C- to N-hydrolase (β-1,4-glucosidase to β-1,4-N-acetyl glucosaminidase) promoted SOM degradation compared to those involved in organic C- and N- degradation, which had a significant positive correlation with qCO2. The stoichiometric ratios of microbial biomass (MBC/MBN) were positively correlated with C use efficiency, indicating root exudates with higher C/N ratios provide an undersupply of N for microorganisms that trigger the release of N-degrading extracellular enzymes. Our findings showed that the C/N stoichiometry of root exudates controlled SOM mineralization by affecting the specific response of the microbial biomass through the activity of C- and N-releasing extracellular enzymes to adjust the microbial C/N ratio.
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| 3. |
- Dao, Thao Thi, et al.
(author)
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How temperature and aridity drive lignin decomposition along a latitudinal transect in western Siberia
- 2023
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In: European Journal of Soil Science. - 1351-0754 .- 1365-2389. ; 74:5
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Journal article (peer-reviewed)abstract
- Climate change drives a northward shift of biomes in high-latitude regions. This might have consequences on the decomposition of plant litter entering the soil, including its lignin component, which is one of the most abundant components of vascular plants. In order to elucidate the combined effect of climate and soil characteristics on the decomposition pattern of lignin, we investigated lignin contents and its degree of oxidative decomposition within soil profiles along a climosequence in western Siberia. Soil samples were collected from organic topsoil to mineral subsoil at six sites along a 1500-km latitudinal transect, stretching from tundra, through taiga and forest steppe to typical steppe. The stage of lignin degradation, as mirrored by decreasing organic carbon-normalized lignin contents and increasing oxidative alteration of the remnant lignin (acid-to-aldehyde ratios of vanillyl- and syringyl-units [(Ac/Al)V and (Ac/Al)S]) within soil horizons, increased from tundra to forest steppe and then decreased to the steppe. Principal component analysis, involving also climatic conditions such as mean annual temperature and aridity index, showed that the different states of lignin degradation between horizons related well to the activity of phenoloxidases and peroxidases, enzymes involved in lignin depolymerization that are produced primarily by fungi and less importantly by bacteria. The low microbial lignin decomposition in the tundra was likely due to low temperature and high soil moisture, which do not favour the fungi. Increasing temperature and decreasing soil moisture, facilitating a higher abundance of fungi, led to increased fungal lignin decomposition towards the forest-steppe biome, while drought and high pH might be responsible for the reduced lignin decomposition in the steppe. We infer that a shift of biomes to the north, driven by climate change, might promote lignin decomposition in the northern parts, whereas in the south a further retardation might be likely.
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| 4. |
- Dao, Thao Thi, et al.
(author)
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Lignin Preservation and Microbial Carbohydrate Metabolism in Permafrost Soils
- 2022
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In: Journal of Geophysical Research - Biogeosciences. - 2169-8953 .- 2169-8961. ; 127:1
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Journal article (peer-reviewed)abstract
- Permafrost-affected soils in the northern circumpolar region store more than 1,000 Pg soil organic carbon (OC), and are strongly vulnerable to climatic warming. However, the extent to which changing soil environmental conditions with permafrost thaw affects different compounds of soil organic matter (OM) is poorly understood. Here, we assessed the fate of lignin and non-cellulosic carbohydrates in density fractionated soils (light fraction, LF vs. heavy fraction, HF) from three permafrost regions with decreasing continentality, expanding from east to west of northern Siberia (Cherskiy, Logata, Tazovskiy, respectively). In soils at the Tazovskiy site with thicker active layers, the LF showed smaller OC-normalized contents of lignin-derived phenols and plant-derived sugars and a decrease of these compounds with soil depth, while a constant or even increasing trend was observed in soils with shallower active layers (Cherskiy and Logata). Also in the HF, soils at the Tazovskiy site had smaller contents of OC-normalized lignin-derived phenols and plant-derived sugars along with more pronounced indicators of oxidative lignin decomposition and production of microbial-derived sugars. Active layer deepening, thus, likely favors the decomposition of lignin and plant-derived sugars, that is, lignocelluloses, by increasing water drainage and aeration. Our study suggests that climate-induced degradation of permafrost soils may promote carbon losses from lignin and associated polysaccharides by abolishing context-specific preservation mechanisms. However, relations of OC-based lignin-derived phenols and sugars in the HF with mineralogical properties suggest that future OM transformation and carbon losses will be modulated in addition by reactive soil minerals.
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| 5. |
- Ensminger, Ingo, et al.
(author)
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Intermittent low temperatures constrain spring recovery of photosynthesis in boreal Scots pine forests
- 2004
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In: Global Change Biology. - : Wiley. - 1354-1013. ; 10:6, s. 995-1008
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Journal article (peer-reviewed)abstract
- During winter and early spring, evergreen boreal conifers are severely stressed because light energy cannot be used when photosynthesis is pre-empted by low ambient temperatures. To study photosynthetic performance dynamics in a severe boreal climate, seasonal changes in photosynthetic pigments, chloroplast proteins and photochemical efficiency were studied in a Scots pine forest near Zotino, Central Siberia. In winter, downregulation of photosynthesis involved loss of chlorophylls, a twofold increase in xanthophyll cycle pigments and sustained high levels of the light stress-induced zeaxanthin pigment. The highest levels of xanthophylls and zeaxanthin did not occur during the coldest winter period, but rather in April when light was increasing, indicating an increased capacity for thermal dissipation of excitation energy at that time. Concomitantly, in early spring the D1 protein of the photosystem II (PSII) reaction centre and the light-harvesting complex of PSII dropped to their lowest annual levels. In April and May, recovery of PSII activity, chloroplast protein synthesis and rearrangements of pigments were observed as air temperatures increased above 0°C. Nevertheless, severe intermittent low-temperature episodes during this period not only halted but actually reversed the physiological recovery. During these spring low-temperature episodes, protective processes involved a complementary function of the PsbS and early light-induced protein thylakoid proteins. Full recovery of photosynthesis did not occur until the end of May. Our results show that even after winter cold hardening, photosynthetic activity in evergreens responds opportunistically to environmental change throughout the cold season. Therefore, climate change effects potentially improve the sink capacity of boreal forests for atmospheric carbon. However, earlier photosynthesis in spring in response to warmer temperatures is strongly constrained by environmental variation, counteracting the positive effects of an early recovery process.
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| 6. |
- Gentsch, Norman, et al.
(author)
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Temperature response of permafrost soil carbon is attenuated by mineral protection
- 2018
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In: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 24:8, s. 3401-3415
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Journal article (peer-reviewed)abstract
- Climate change in Arctic ecosystems fosters permafrost thaw and makes massive amounts of ancient soil organic carbon (OC) available to microbial breakdown. However, fractions of the organic matter (OM) may be protected from rapid decomposition by their association with minerals. Little is known about the effects of mineral-organic associations (MOA) on the microbial accessibility of OM in permafrost soils and it is not clear which factors control its temperature sensitivity. In order to investigate if and how permafrost soil OC turnover is affected by mineral controls, the heavy fraction (HF) representing mostly MOA was obtained by density fractionation from 27 permafrost soil profiles of the Siberian Arctic. In parallel laboratory incubations, the unfractionated soils (bulk) and their HF were comparatively incubated for 175 days at 5 and 15 degrees C. The HF was equivalent to 70 +/- 9% of the bulk CO2 respiration as compared to a share of 63 +/- 1% of bulk OC that was stored in the HF. Significant reduction of OC mineralization was found in all treatments with increasing OC content of the HF (HF-OC), clay-size minerals and Fe or Al oxyhydroxides. Temperature sensitivity (Q10) decreased with increasing soil depth from 2.4 to 1.4 in the bulk soil and from 2.9 to 1.5 in the HF. A concurrent increase in the metal-to-HF-OC ratios with soil depth suggests a stronger bonding of OM to minerals in the subsoil. There, the younger C-14 signature in CO2 than that of the OC indicates a preferential decomposition of the more recent OM and the existence of a MOA fraction with limited access of OM to decomposers. These results indicate strong mineral controls on the decomposability of OM after permafrost thaw and on its temperature sensitivity. Thus, we here provide evidence that OM temperature sensitivity can be attenuated by MOA in permafrost soils.
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| 7. |
- Liu, Yuhuai, et al.
(author)
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Stoichiometric theory shapes enzyme kinetics in paddy bulk soil but not in rhizosphere soil
- 2022
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In: Land Degradation and Development. - : Wiley. - 1099-145X .- 1085-3278. ; 33:2, s. 246-256
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Journal article (peer-reviewed)abstract
- The available carbon (C) to phosphorus (P) ratio in soil is regulated by extracellular hydrolases for C and P acquisition by microbes and plants. However, the stoichiometric relationship between acquiring C and P in paddy rhizosphere and bulk soils remains unclear. The objective was to explore the underlying mechanisms of C and P acquisition stoichiometry in rhizosphere and bulk soils in response to P fertilization and cellulose addition. Amendment with either cellulose or P separately caused a significant increase in the maximal velocity (Vmax) of C acquisition enzymes (β-1,4-glucosidase and β-cellobiohydrolase) but decreased that of P acquisition enzymes (acid and alkaline phosphomonoesterases) in bulk soil. In contrast, lower Vmax values of C and P acquisition enzymes were observed in rhizosphere soil than in bulk soil. The co-application of cellulose and P increased the Vmax of P acquisition enzymes in rhizosphere soil but decreased that of only alkaline phosphomonoesterase in bulk soil. Results show that P availability and labile-C content co-regulated the P/C acquisition ratio, and two inverse linear relationships were observed. Specifically, the P/C acquisition ratio was negatively related to both the dissolved organic C/Olsen-P ratio and the microbial biomass C/P ratio in rhizosphere soil. However, the P/C acquisition ratio was positively related to both the dissolved organic C/Olsen-P ratio and the microbial biomass C/P ratio in bulk soil. Overall, microbes mineralized less organic P to acquire P in paddy soil rhizosphere (i.e. containing higher labile-C) than in bulk soil (i.e. having lower labile-C contents).
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| 8. |
- Santruckova, Hana, et al.
(author)
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Significance of dark CO2 fixation in arctic soils
- 2018
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In: Soil Biology and Biochemistry. - : Elsevier BV. - 0038-0717 .- 1879-3428. ; 119, s. 11-21
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Journal article (peer-reviewed)abstract
- The occurrence of dark fixation of CO2 by heterotrophic microorganisms in soil is generally accepted, but its importance for microbial metabolism and soil organic carbon (C) sequestration is unknown, especially under C limiting conditions. To fill this knowledge gap, we measured dark (CO2)-C-13 incorporation into soil organic matter and conducted a C-13-labelling experiment to follow the C-13 incorporation into phospholipid fatty acids as microbial biomass markers across soil profiles of four tundra ecosystems in the northern circumpolar region, where net primary productivity and thus soil C inputs are low. We further determined the abundance of various carboxylase genes and identified their microbial origin with metagenomics. The microbial capacity for heterotrophic CO2 fixation was determined by measuring the abundance of carboxylase genes and the incorporation of C-13 into soil C following the augmentation of bioavailable C sources. We demonstrate that dark CO2 fixation occurred ubiquitously in arctic tundra soils, with increasing importance in deeper soil horizons, presumably due to increasing C limitation with soil depth. Dark CO2 fixation accounted on average for 0.4, 1.0, 1.1, and 16% of net respiration in the organic, cryoturbated organic, mineral and permafrost horizons, respectively. Genes encoding anaplerotic enzymes of heterotrophic microorganisms comprised the majority of identified carboxylase genes. The genetic potential for dark CO2 fixation was spread over a broad taxonomic range. The results suggest important regulatory function of CO2 fixation in C limited conditions. The measurements were corroborated by modeling the long-term impact of dark CO2 fixation on soil organic matter. Our results suggest that increasing relative CO2 fixation rates in deeper soil horizons play an important role for soil internal C cycling and can, at least in part, explain the isotopic enrichment with soil depth.
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| 9. |
- Thao, Thi, et al.
(author)
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Fate of carbohydrates and lignin in north-east Siberian permafrost soils
- 2018
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In: Soil Biology and Biochemistry. - : Elsevier BV. - 0038-0717 .- 1879-3428. ; 116, s. 311-322
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Journal article (peer-reviewed)abstract
- Permafrost soils preserve huge amounts of organic carbon (OC) prone to decomposition under changing climatic conditions. However, knowledge on the composition of soil organic matter (OM) and its transformation and vulnerability to decomposition in these soils is scarce. We determined neutral sugars and lignin-derived phenols, released by trifluoroacetic acid (TFA) and CuO oxidation, respectively, within plants and soil density fractions from the active layer and the upper permafrost layer at three different tundra types (shrubby grass, shrubby tussock, shrubby lichen) in the Northeast Siberian Arctic. The heavy fraction (HF; > 1.6 g mL(-1)) was characterized by a larger enrichment of microbial sugars (hexoses vs. pentoses) and more pronotmced lignin degradation (acids vs. aldehydes) as compared to the light fraction (LF; < 1.6 g mL(-1)), showing the transformation from plant residue-dominated particulate OM to a largely microbial imprint in mineral-associated OM. In contrast to temperate and tropical soils, total neutral sugar contents and galactose plus mannose to arabinose plus xylose ratios (GM/AX) decreased in the HE with soil depth, which may indicate a process of effective recycling of microbial biomass rather than utilizing old plant materials. At the same dine, lignin-derived phenols increased and the degree of oxidative decomposition of lignin decreased with soil depth, suggesting a selective preservation of lignin presumably due to anaerobiosis. As large parts of the plant-derived pentoses are incorporated in lignocelluloses and thereby protected against rapid decomposition, this might also explain the relative enrichment of pentoses with soil depth. Hence, our results show a relatively large contribution of plant derived OM, particularly in the buried topsoil and subsoil, which is stabilized by the current soil environmental conditions but may become available to decomposers if permafrost degradation promotes soil drainage and improves the soil oxygen supply.
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| 10. |
- Wild, Birgit, et al.
(author)
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Plant-derived compounds stimulate the decomposition of organic matter in arctic permafrost soils
- 2016
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In: Scientific Reports. - : Springer Science and Business Media LLC. - 2045-2322. ; 6
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Journal article (peer-reviewed)abstract
- Arctic ecosystems are warming rapidly, which is expected to promote soil organic matter (SOM) decomposition. In addition to the direct warming effect, decomposition can also be indirectly stimulated via increased plant productivity and plant-soil C allocation, and this so called “priming effect” might significantly alter the ecosystem C balance. In this study, we provide first mechanistic insights into the susceptibility of SOM decomposition in arctic permafrost soils to priming. By comparing 119 soils from four locations across the Siberian Arctic that cover all horizons of active layer and upper permafrost, we found that an increased availability of plant-derived organic C particularly stimulated decomposition in subsoil horizons where most of the arctic soil carbon is located. Considering the 1,035 Pg of arctic soil carbon, such an additional stimulation of decomposition beyond the direct temperature effect can accelerate net ecosystem C losses, and amplify the positive feedback to global warming.
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