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| 4. |
- Klionsky, Daniel J., et al.
(författare)
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Guidelines for the use and interpretation of assays for monitoring autophagy
- 2012
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Ingår i: Autophagy. - : Informa UK Limited. - 1554-8635 .- 1554-8627. ; 8:4, s. 445-544
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Forskningsöversikt (refereegranskat)abstract
- In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
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| 7. |
- Agostoni, Angelo, et al.
(författare)
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Hereditary and acquired angioedema: problems and progress: proceedings of the third C1 esterase inhibitor deficiency workshop and beyond
- 2004
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Ingår i: Journal of Allergy and Clinical Immunology. - : Elsevier BV. - 1097-6825 .- 0091-6749. ; 114:3 Suppl, s. 51-131
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Tidskriftsartikel (refereegranskat)abstract
- Hereditary angioedema (HAE), a rare but life-threatening condition, manifests as acute attacks of facial, laryngeal, genital, or peripheral swelling or abdominal pain secondary to intra-abdominal edema. Resulting from mutations affecting C1 esterase inhibitor (C1-INH), inhibitor of the first complement system component, attacks are not histamine-mediated and do not respond to antihistamines or corticosteroids. Low awareness and resemblance to other disorders often delay diagnosis; despite availability of C1-INH replacement in some countries, no approved, safe acute attack therapy exists in the United States. The biennial C1 Esterase Inhibitor Deficiency Workshops resulted from a European initiative for better knowledge and treatment of HAE and related diseases. This supplement contains work presented at the third workshop and expanded content toward a definitive picture of angioedema in the absence of allergy. Most notably, it includes cumulative genetic investigations; multinational laboratory diagnosis recommendations; current pathogenesis hypotheses; suggested prophylaxis and acute attack treatment, including home treatment; future treatment options; and analysis of patient subpopulations, including pediatric patients and patients whose angioedema worsened during pregnancy or hormone administration. Causes and management of acquired angioedema and a new type of angioedema with normal C1-INH are also discussed. Collaborative patient and physician efforts, crucial in rare diseases, are emphasized. This supplement seeks to raise awareness and aid diagnosis of HAE, optimize treatment for all patients, and provide a platform for further research in this rare, partially understood disorder.
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| 9. |
- Olsson, Gustaf, et al.
(författare)
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Instrumentation, control and automation in wastewater – from London 1973 to Narbonne 2013
- 2014
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Ingår i: Water Science and Technology. - : IWA Publishing. - 0273-1223 .- 1996-9732. ; 69:7, s. 1373-1385
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Tidskriftsartikel (refereegranskat)abstract
- Key developments of instrumentation, control and automation (ICA) applications in wastewater systems during the past 40 years are highlighted in this paper. From the first ICA conference in 1973 through to today there has been a tremendous increase in the understanding of the processes, instrumentation, computer systems and control theory. However, many developments have not been addressed here, such as sewer control, drinking water treatment and water distribution control. It is hoped that this review can stimulate new attempts to more effectively apply control and automation in water systems in the coming years.
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| 10. |
- Quill, Tyler J., et al.
(författare)
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Charge Carrier Induced Structural Ordering And Disordering in Organic Mixed Ionic Electronic Conductors
- 2024
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Ingår i: Advanced Materials. - 0935-9648 .- 1521-4095. ; 36:15
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Tidskriftsartikel (refereegranskat)abstract
- Operational stability underpins the successful application of organic mixed ionic-electronic conductors (OMIECs) in a wide range of fields, including biosensing, neuromorphic computing, and wearable electronics. In this work, both the operation and stability of a p-type OMIEC material of various molecular weights are investigated. Electrochemical transistor measurements reveal that device operation is very stable for at least 300 charging/discharging cycles independent of molecular weight, provided the charge density is kept below the threshold where strong charge–charge interactions become likely. When electrochemically charged to higher charge densities, an increase in device hysteresis and a decrease in conductivity due to a drop in the hole mobility arising from long-range microstructural disruptions are observed. By employing operando X-ray scattering techniques, two regimes of polaron-induced structural changes are found: 1) polaron-induced structural ordering at low carrier densities, and 2) irreversible structural disordering that disrupts charge transport at high carrier densities, where charge–charge interactions are significant. These operando measurements also reveal that the transfer curve hysteresis at high carrier densities is accompanied by an analogous structural hysteresis, providing a microstructural basis for such instabilities. This work provides a mechanistic understanding of the structural dynamics and material instabilities of OMIEC materials during device operation.
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| 13. |
- Regmi, P., et al.
(författare)
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The future of WRRF modelling - Outlook and challenges
- 2019
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Ingår i: Water Science and Technology. - : IWA Publishing. - 0273-1223 .- 1996-9732. ; 79:1, s. 3-14
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Tidskriftsartikel (refereegranskat)abstract
- The wastewater industry is currently facing dramatic changes, shifting away from energy-intensive wastewater treatment towards low-energy, sustainable technologies capable of achieving energy positive operation and resource recovery. The latter will shift the focus of the wastewater industry to how one could manage and extract resources from the wastewater, as opposed to the conventional paradigm of treatment. Debatable questions arise: Can the more complex models be calibrated, or will additional unknowns be introduced? After almost 30 years using well-known International Water Association (IWA) models, should the community move to other components, processes, or model structures like 'black box' models, computational fluid dynamics techniques, etc.? Can new data sources - e.g. on-line sensor data, chemical and molecular analyses, new analytical techniques, off-gas analysis - keep up with the increasing process complexity? Are different methods for data management, data reconciliation, and fault detection mature enough for coping with such a large amount of information? Are the available calibration techniques able to cope with such complex models? This paper describes the thoughts and opinions collected during the closing session of the 6th IWA/WEF Water Resource Recovery Modelling Seminar 2018. It presents a concerted and collective effort by individuals from many different sectors of the wastewater industry to offer past and present insights, as well as an outlook into the future of wastewater modelling.
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| 14. |
- Takacs, J., et al.
(författare)
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Community engagement in public health emergency preparedness
- 2019
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Ingår i: European Journal of Public Health. - : Oxford University Press. - 1101-1262 .- 1464-360X. ; 29:Suppl 4, s. 574-574
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)abstract
- BackgroundCommunities that could be affected by infectious disease outbreaks are increasingly recognised as resources that may be effectively utilized by the authorities during public health emergencies.MethodsThis case study project, aiming to identify synergies between communities and authorities, was based on qualitative sources of evidence, including document and media review, stakeholder mapping, interviews and FGDs (N = 137). Four countries were selected for inclusion: Spain and the Netherlands on the basis of emerging tick-born disease incidents; Iceland and Ireland on the basis of acute gastroenteritis outbreaks.ResultsIn the Netherlands and Spain strong synergies were identified in tick surveillance activities, and the value of pre-existing networks of interest groups for preparedness and response activities was recognised. The Icelandic norovirus event was unexpected and fast-moving, while VTEC in Ireland is a familiar and slower-burning challenge. As a relatively common disease in Ireland, VTEC-protocols are closely followed, while a generic all-hazards approach was taken in Iceland. There was considerable community support in the responses in both countries., and in Iceland community representatives also actively participated in producing institutional post-event evaluations.ConclusionsAn over-riding principle emerging from this study is that an informed, at-risk community understands the challenges to adopting effective preventive practices for themselves better than anyone. Additional good practices included the utilisation of pre-existing stakeholder networks for information dissemination; and of monitoring community perceptions of any public health incident, including through social media, in order to identify and manage misperceptions. Efforts to build on the community engagement activities that are already in place in the four countries could contribute to better preparedness planning and more efficient and timely responses in future outbreaks.Key messagesRecognise the community as a real partner in outbreak preparedness, response, and recovery.Optimise communications with communities who may be affected by outbreaks.
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| 15. |
- Hynynen, Jonna, 1987, et al.
(författare)
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'Lignin and extractives first' conversion of lignocellulosic residual streams using UV light from LEDs
- 2021
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Ingår i: Green Chemistry. - : Royal Society of Chemistry (RSC). - 1463-9262 .- 1463-9270. ; 23, s. 8251-8259
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Tidskriftsartikel (refereegranskat)abstract
- Lignocellulosic biomass, especially lignin and extractives, has the potential to substitute fossil precursors in the chemical industry. The conversion of lignin has been intensively researched, but challenges remain as high temperatures and increased pressure are commonly used, which is not energy efficient. Lignin and wood extractives bear chromophoric groups that can absorb light in the ultraviolet (UV) region, which enables photochemical reactions. Ultraviolet light emitting diodes (UV-LEDs) are an emerging technology; they are cheap, versatile, and energy-efficient compared to existing mercury lamps. UV-LEDs were used in this study as a proof of concept for the valorisation of a lignocellulosic residual stream from the pulp and paper industry, sawdust. In a process at ambient temperature and pressure and without the use of a catalyst, we have shown that lignin and extractives can be valorised using light from UV-LEDs. Simplified lignin model compounds were used to pinpoint chemical reactions during irradiation, and to ease the analysis of the sawdust samples. The rate of conversion upon irradiation of the model compounds was found to be 0.7-2.3 g L-1 h(-1), depending on the concentration of the starting compounds.
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| 16. |
- Kögler, T., et al.
(författare)
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Fast-neutron-induced fission cross section of Pu 242 measured at the neutron time-of-flight facility nELBE
- 2019
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Ingår i: Physical Review C. - 2469-9985. ; 99:2
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Tidskriftsartikel (refereegranskat)abstract
- The fast-neutron-induced fission cross section of Pu242 was measured at the neutron time-of-flight facility nELBE. A parallel-plate fission ionization chamber with novel, homogeneous, large-area Pu242 deposits on Si-wafer backings was used to determine this quantity relative to the IAEA neutron cross-section standard U235(n,f) in the energy range of 0.5 to 10 MeV. The number of target nuclei was determined from the measured spontaneous fission rate of Pu242. This helps to reduce the influence of the fission fragment detection efficiency on the cross section. Neutron transport simulations performed with geant4, mcnp6, and fluka2011 are used to correct the cross-section data for neutron scattering. In the reported energy range the systematic uncertainty is below 2.7% and on average the statistical uncertainty is 4.9%. The determined results show an agreement within 0.67(16)% to recently published data and a good accordance to current evaluated data sets.
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| 17. |
- Oberstedt, Andreas, et al.
(författare)
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Improved values for the characteristics of prompt-fission gamma-ray spectra from the reaction U-235(n(th), f)
- 2013
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Ingår i: Physical Review C. Nuclear Physics. - : American Physical Society. - 0556-2813 .- 1089-490X .- 2469-9985 .- 2469-9993. ; 87:5, s. 051602-
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Tidskriftsartikel (refereegranskat)abstract
- In this paper we present results from measurements of prompt gamma rays from the thermal neutron induced fission of U-235. Photons were measured in coincidence with fission fragments with cerium-doped LaCl3 and LaBr3 as well as CeBr3 scintillation detectors, which offer an intriguing combination of excellent timing resolution and good resolving power. The spectra measured with all employed detectors are in excellent agreement with respect to their shapes. Characteristic parameters were extracted for a gamma-energy range from 0.1 to 6.0 MeV and the results obtained with several detectors were averaged. From that, the average emission yield of prompt-fission gamma rays was determined to be (nu) over bar (gamma) = (8.19 +/- 0.11) per fission, the average energy per photon to be epsilon(gamma) = (0.85 +/- 0.02) MeV, and the total energy to be E-gamma,E-tot = (6.92 +/- 0.09) MeV. The uncertainties are much lower than the 7.5% requested for the modeling of advanced nuclear reactor cores. Estimating the influence of gamma rays with energies between 6 and 10 MeV on the values determined in this work revealed a negligible deviation of the order of the found uncertainties.
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| 18. |
- Oberstedt, Andreas, 1960-, et al.
(författare)
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New prompt fission gamma-ray spectral data and its implication on present evaluated nuclear data files
- 2013
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Ingår i: Physics Procedia. - : Elsevier BV. - 1875-3892 .- 1875-3884. ; 47, s. 156-165
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Tidskriftsartikel (refereegranskat)abstract
- In this paper we report on new spectral prompt gamma-ray measurements from the spontaneous fission of Cf-252 and thermal neutron-induced fission of U-236*. In both experiments, fission of U-236*. In both experiments, gamma-ray multiplicities, average and total gamma-energies were extracted. gamma-ray multiplicities, average and total.-energies were extracted. Apart from one recent measurement on Cf-252, about four decades have passed since the last dedicated experiments were reported in literature. Hence, there was a need for a revision, not only with respect to high priority nuclear data requests by the Nuclear Energy Agency (NEA). In the first mentioned experiment we have measured prompt fission gamma-rays with both cerium-doped LaBr3 and CeBr3 scintillation detectors, which both exhibit excellent timing and good energy resolution. The results from both detectors are in excellent agreement with each other and confirm the historical data. In the experiment on U-235(n(th), f) we employed cerium-doped LaCl3 detectors, together with the lanthanum bromide detectors mentioned above. Even here the first results indicate a good agreement with data from the early 1970' s. They are also in accordance with data in evaluated libraries like ENDF/B-VII.0, while this is not the case for Cf-252(SF). Hence, here an update is strongly recommended.
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| 19. |
- Rado, Marta, et al.
(författare)
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Socio-economic inequalities in smoking and drinking in adolescence: Assessment of social network dynamics
- 2023
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Ingår i: Addiction. - : WILEY. - 0965-2140 .- 1360-0443.
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Tidskriftsartikel (refereegranskat)abstract
- Aims: We investigated whether (1) adolescents selected friends with a similar socio-economic status (SES), (2) smoking and alcohol consumption spread in networks and (3) the exclusion of non-smokers or non-drinkers differed between SES groups. Design: This was a longitudinal study using stochastic actor-oriented models to analyze complete social network data over three waves. Setting: Eight Hungarian secondary schools with socio-economically diverse classes took part. Participants: This study comprised 232 adolescents aged between 14 and 15 years in the first wave. Measurements: Self-reported smoking behavior, alcohol consumption behavior and friendship ties were measured. SES was measured based upon entitlement to an income-tested regular child protection benefit. Findings: Non-low-SES adolescents were most likely to form friendships with peers from their own SES group [odds ratio (OR) = 1.07, 95% confidence interval (CI) = 1.02-1.11]. Adolescents adjusted their smoking behavior (OR = 24.05, 95% CI = 1.27-454.86) but not their alcohol consumption (OR = 1.65, 95% CI = 0.62-4.39) to follow the behavior of their friends. Smokers did not differ from non-smokers in the likelihood of receiving a friendship nomination (OR = 0.98, 95% CI = 0.87-1.10), regardless of their SES. Alcohol consumers received significantly more friendship nominations than non-consumers (OR = 1.16, 95% CI = 1.01-1.33), but this association was not significantly different according to SES. Conclusions: Hungarian adolescents appear to prefer friendships within their own socio-economic status group, and smoking and alcohol consumption spread within those friendship networks. Socio-economic groups do not differ in the extent to which they encourage smoking or alcohol consumption.
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| 20. |
- Saw, Jimmy H., et al.
(författare)
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Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes
- 2015
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Ingår i: Philosophical Transactions of the Royal Society of London. Biological Sciences. - : The Royal Society. - 0962-8436 .- 1471-2970. ; 370:1678
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Tidskriftsartikel (refereegranskat)abstract
- The origin of eukaryotes represents an enigmatic puzzle, which is still lacking a number of essential pieces. Whereas it is currently accepted that the process of eukaryogenesis involved an interplay between a host cell and an alphaproteo-bacterial endosymbiont, we currently lack detailed information regarding the identity and nature of these players. A number of studies have provided increasing support for the emergence of the eukaryotic host cell from within the archaeal domain of life, displaying a specific affiliation with the archaeal TACK superphylum. Recent studies have shown that genomic exploration of yet-uncultivated archaea, the so-called archaeal 'dark matter', is able to provide unprecedented insights into the process of eukaryogenesis. Here, we provide an overview of state-of-the-art cultivation-independent approaches, and demonstrate how these methods were used to obtain draft genome sequences of several novel members of the TACK superphylum, including Lokiarchaeum, two representatives of the Miscellaneous Crenarchaeotal Group (Bathyarchaeota), and a Korarchaeum-related lineage. The maturation of cultivation-independent genomics approaches, as well as future developments in next-generation sequencing technologies, will revolutionize our current view of microbial evolution and diversity, and provide profound new insights into the early evolution of life, including the enigmatic origin of the eukaryotic cell.
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| 21. |
- Velasco, Inmaculada, et al.
(författare)
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Dissecting the KNDy hypothesis: KNDy neuron-derived kisspeptins are dispensable for puberty but essential for preserved female fertility and gonadotropin pulsatility.
- 2023
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Ingår i: Metabolism: clinical and experimental. - 1532-8600. ; 144
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Tidskriftsartikel (refereegranskat)abstract
- Kiss1 neurons in the hypothalamic arcuate-nucleus (ARC) play key roles in the control of GnRH pulsatility and fertility. A fraction of ARC Kiss1 neurons, termed KNDy, co-express neurokinin B (NKB; encoded by Tac2). Yet, NKB- and Kiss1-only neurons are also found in the ARC, while a second major Kiss1-neuronal population is present in the rostral hypothalamus. The specific contribution of different Kiss1 neuron sub-sets and kisspeptins originating from them to the control of reproduction and eventually other bodily functions remains to be fully determined.To tease apart the physiological roles of KNDy-born kisspeptins, conditional ablation of Kiss1 in Tac2-expressing cells was implemented in vivo. To this end, mice with Tac2 cell-specific Kiss1 KO (TaKKO) were generated and subjected to extensive reproductive and metabolic characterization.TaKKO mice displayed reduced ARC kisspeptin content and Kiss1 expression, with greater suppression in females, which was detectable at infantile-pubertal age. In contrast, Tac2/NKB levels were fully preserved. Despite the drop of ARC Kiss1/kisspeptin, pubertal timing was normal in TaKKO mice of both sexes. However, young-adult TaKKO females displayed disturbed LH pulsatility and sex steroid levels, with suppressed basal LH and pre-ovulatory LH surges, early-onset subfertility and premature ovarian insufficiency. Conversely, testicular histology and fertility were grossly conserved in TaKKO males. Ablation of Kiss1 in Tac2-cells led also to sex-dependent alterations in body composition, glucose homeostasis, especially in males, and locomotor activity, specifically in females.Our data document that KNDy-born kisspeptins are dispensable/compensable for puberty in both sexes, but required for maintenance of female gonadotropin pulsatility and fertility, as well as for adult metabolic homeostasis.Neurons in the hypothalamic arcuate nucleus (ARC) co-expressing kisspeptins and NKB, named KNDy, have been recently suggested to play a key role in pulsatile secretion of gonadotropins, and hence reproduction. However, the relative contribution of this Kiss1 neuronal-subset, vs. ARC Kiss1-only and NKB-only neurons, as well as other Kiss1 neuronal populations, has not been assessed in physiological settings. We report here findings in a novel mouse-model with elimination of KNDy-born kisspeptins, without altering other kisspeptin compartments. Our data highlights the heterogeneity of ARC Kiss1 populations and document that, while dispensable/compensable for puberty, KNDy-born kisspeptins are required for proper gonadotropin pulsatility and fertility, specifically in females, and adult metabolic homeostasis. Characterization of this functional diversity is especially relevant, considering the potential of kisspeptin-based therapies for management of human reproductive disorders.
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