| 1. |
- Benjamin, Bolduc, et al.
(författare)
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The IsoGenie database : an interdisciplinary data management solution for ecosystems biology and environmental research
- 2020
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Ingår i: PeerJ. - : PeerJ. - 2167-8359. ; 8
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Tidskriftsartikel (refereegranskat)abstract
- Modern microbial and ecosystem sciences require diverse interdisciplinary teams that are often challenged in “speaking” to one another due to different languages and data product types. Here we introduce the IsoGenie Database (IsoGenieDB; https://isogenie-db.asc.ohio-state.edu/), a de novo developed data management and exploration platform, as a solution to this challenge of accurately representing and integrating heterogenous environmental and microbial data across ecosystem scales. The IsoGenieDB is a public and private data infrastructure designed to store and query data generated by the IsoGenie Project, a ~10 year DOE-funded project focused on discovering ecosystem climate feedbacks in a thawing permafrost landscape. The IsoGenieDB provides (i) a platform for IsoGenie Project members to explore the project’s interdisciplinary datasets across scales through the inherent relationships among data entities, (ii) a framework to consolidate and harmonize the datasets needed by the team’s modelers, and (iii) a public venue that leverages the same spatially explicit, disciplinarily integrated data structure to share published datasets. The IsoGenieDB is also being expanded to cover the NASA-funded Archaea to Atmosphere (A2A) project, which scales the findings of IsoGenie to a broader suite of Arctic peatlands, via the umbrella A2A Database (A2A-DB). The IsoGenieDB’s expandability and flexible architecture allow it to serve as an example ecosystems database.
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| 2. |
- Ellenbogen, Jared B., et al.
(författare)
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Methylotrophy in the Mire : direct and indirect routes for methane production in thawing permafrost
- 2024
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Ingår i: mSystems. - 2379-5077. ; 9:1
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Tidskriftsartikel (refereegranskat)abstract
- While wetlands are major sources of biogenic methane (CH4), our understanding of resident microbial metabolism is incomplete, which compromises the prediction of CH4 emissions under ongoing climate change. Here, we employed genome-resolved multi-omics to expand our understanding of methanogenesis in the thawing permafrost peatland of Stordalen Mire in Arctic Sweden. In quadrupling the genomic representation of the site’s methanogens and examining their encoded metabolism, we revealed that nearly 20% of the metagenome-assembled genomes (MAGs) encoded the potential for methylotrophic methanogenesis. Further, 27% of the transcriptionally active methanogens expressed methylotrophic genes; for Methanosarcinales and Methanobacteriales MAGs, these data indicated the use of methylated oxygen compounds (e.g., methanol), while for Methanomassiliicoccales, they primarily implicated methyl sulfides and methylamines. In addition to methanogenic methylotrophy, >1,700 bacterial MAGs across 19 phyla encoded anaerobic methylotrophic potential, with expression across 12 phyla. Metabolomic analyses revealed the presence of diverse methylated compounds in the Mire, including some known methylotrophic substrates. Active methylotrophy was observed across all stages of a permafrost thaw gradient in Stordalen, with the most frozen non-methanogenic palsa found to host bacterial methylotrophy and the partially thawed bog and fully thawed fen seen to house both methanogenic and bacterial methylotrophic activities. Methanogenesis across increasing permafrost thaw is thus revised from the sole dominance of hydrogenotrophic production and the appearance of acetoclastic at full thaw to consider the co-occurrence of methylotrophy throughout. Collectively, these findings indicate that methanogenic and bacterial methylotrophy may be an important and previously underappreciated component of carbon cycling and emissions in these rapidly changing wetland habitats.
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| 3. |
- Fofana, Aminata, et al.
(författare)
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Mapping substrate use across a permafrost thaw gradient
- 2022
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Ingår i: Soil Biology and Biochemistry. - : Elsevier Ltd. - 0038-0717 .- 1879-3428. ; 175
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Tidskriftsartikel (refereegranskat)abstract
- Permafrost thaw in northern peatlands is likely to create a positive feedback to climate change, as microbes transform soil carbon (C) into carbon dioxide (CO2) or methane (CH4). While the microbiome's encoded C-processing potential changes with thaw, the impact on substrate utilization and gas emissions is less well characterized. We therefore examined microbial C-cycling dynamics from a partially thawed Sphagnum-dominated bog to a fully thawed sedge-dominated fen in Stordalen Mire (68.35°N, 19.05°E), Sweden. We profiled C substrate utilization diversity and extent by Biolog Ecoplates™, then tested substrate-specific hypotheses by targeted additions (of glucose, the short chain fatty acids (SCFAs) acetate and butyrate, and the organic acids galacturonic acid and p-hydroxybenzoic acid, all at field-relevant concentrations) under anaerobic conditions at 15 °C. In parallel we characterized microbiomes (via 16S rRNA amplicon sequencing and quantitative polymerase chain reaction) and C gas emissions. The fen exhibited a higher substrate use diversity and faster rate of overall substrate utilization than in the bog, based on Biolog Ecoplate™ incubations. Simple glucose additions (akin to a positive control) to peat microcosms fueled fermentation as expected (reflected in enriched fermenter lineages, their inferred metabolisms, and CO2 production), but also showed potential priming of anaerobic phenol degradation in the bog. Addition of SCFAs to bog and fen produced the least change in lineages and in CO2, and modest suppression of CH4 primarily in the fen, attributed to inhibition. Addition of both organic acids greatly increased the CO2:CH4 ratio in the deep peats but had distinct individual gas dynamics and impacts on microbiota. Both organic acids appeared to act as both C source and as a microbial inhibitor, with galacturonic acid also likely playing a role in electron transfer or acceptance. Collectively, these results support the importance of aboveground-belowground linkages - and in particular the role of Sphagnum spp.- in supplying substrates and inhibitors that drive microbiome assembly and C processing in these dynamically changing systems. In addition, they highlight an important temporal dynamic: responses on the short time scale of incubations (which would reflect transition conditions in the field) differ from those evident at the longer scales of habitat transition, in ways consequential to C gas emissions. In the short term, substrate addition response reflected microbiome legacy (e.g., bog communities were slower to process C and better tolerated inhibitors than fen communities) but led to little overall increase in C gas production (and a high skew to CO2). At the longer time scale of bog and fen thaw stages (which are used to represent these systems in models) the concomitant shifts in plants, hydrology and microbiota attenuate microbiome legacy impacts on substrate processing and C gas emissions over time. As habitat transition areas expand under accelerating change, we hypothesize an increased role of microbiome legacy in the landscape overall, leading to a lag in the increase of CH4 emissions expected from fen expansion.
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| 4. |
- Jeuring, Jelmer, et al.
(författare)
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Is A Common Goal A False Hope in Convergence Research? : Opportunities and Challenges of International Convergence Research to Address Arctic Change
- 2021
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Ingår i: Earth's Future. - : American Geophysical Union (AGU). - 2328-4277. ; 9:5
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Tidskriftsartikel (refereegranskat)abstract
- The Arctic faces multiple pressures including climate change, shifting demographics, human health risks, social justice imbalances, governance issues, and expanding resource extraction. A convergence of academic disciplines-such as natural and social sciences, engineering and technology, health and medicine-and international perspectives is required to meaningfully contribute to solving the challenges of Arctic peoples and ecosystems. However, successfully carrying out convergent, international research and education remains a challenge. Here, lessons from the planning phase of a convergence research project concerned with the health of Arctic waters developed by the Arctic Science IntegrAtion Quest (ASIAQ) are discussed. We discuss our perspective on the challenges, as well as strategies for success, in convergence research as gained from the ASIAQ project which assembled an international consortium of researchers from disparate disciplines representing six universities from four countries (Sweden, Japan, Russia, and the United States) during 2018-2020.
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| 5. |
- Olefeldt, David, et al.
(författare)
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The Boreal-Arctic Wetland and Lake Dataset (BAWLD)
- 2021
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Ingår i: Earth System Science Data. - : Copernicus Gesellschaft MBH. - 1866-3508 .- 1866-3516. ; 13:11, s. 5127-5149
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Tidskriftsartikel (refereegranskat)abstract
- Methane emissions from boreal and arctic wetlands, lakes, and rivers are expected to increase in response to warming and associated permafrost thaw. However, the lack of appropriate land cover datasets for scaling field-measured methane emissions to circumpolar scales has contributed to a large uncertainty for our understanding of present-day and future methane emissions. Here we present the BorealArctic Wetland and Lake Dataset (BAWLD), a land cover dataset based on an expert assessment, extrapolated using random forest modelling from available spatial datasets of climate, topography, soils, permafrost conditions, vegetation, wetlands, and surface water extents and dynamics. In BAWLD, we estimate the fractional coverage of five wetland, seven lake, and three river classes within 0.5 x 0.5 degrees grid cells that cover the northern boreal and tundra biomes (17 % of the global land surface). Land cover classes were defined using criteria that ensured distinct methane emissions among classes, as indicated by a co-developed comprehensive dataset of methane flux observations. In BAWLD, wetlands occupied 3.2 x 10(6) km(2) (14 % of domain) with a 95 % confidence interval between 2.8 and 3.8 x 10(6) km(2). Bog, fen, and permafrost bog were the most abundant wetland classes, covering similar to 28 % each of the total wetland area, while the highest-methane-emitting marsh and tundra wetland classes occupied 5 % and 12 %, respectively. Lakes, defined to include all lentic open-water ecosystems regardless of size, covered 1.4 x 10(6) km(2) (6 % of domain). Low-methane-emitting large lakes (>10 km(2)) and glacial lakes jointly represented 78 % of the total lake area, while high-emitting peatland and yedoma lakes covered 18 % and 4 %, respectively. Small (<0.1 km(2)) glacial, peatland, and yedoma lakes combined covered 17 % of the total lake area but contributed disproportionally to the overall spatial uncertainty in lake area with a 95 % confidence interval between 0.15 and 0.38 x 10(6) km(2). Rivers and streams were estimated to cover 0.12 x 10(6) km(2) (0.5 % of domain), of which 8 % was associated with high-methane-emitting headwaters that drain organic-rich landscapes. Distinct combinations of spatially co-occurring wetland and lake classes were identified across the BAWLD domain, allowing for the mapping of "wetscapes" that have characteristic methane emission magnitudes and sensitivities to climate change at regional scales. With BAWLD, we provide a dataset which avoids double-accounting of wetland, lake, and river extents and which includes confidence intervals for each land cover class. As such, BAWLD will be suitable for many hydrological and biogeochemical modelling and upscaling efforts for the northern boreal and arctic region, in particular those aimed at improving assessments of current and future methane emissions.
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| 6. |
- Pascual, Didac, et al.
(författare)
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The missing pieces for better future predictions in subarctic ecosystems: A Torneträsk case study
- 2021
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Ingår i: Ambio. - : Springer. - 0044-7447 .- 1654-7209. ; 50:2, s. 375-392
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Forskningsöversikt (refereegranskat)abstract
- Arctic and subarctic ecosystems are experiencing substantial changes in hydrology, vegetation, permafrost conditions, and carbon cycling, in response to climatic change and other anthropogenic drivers, and these changes are likely to continue over this century. The total magnitude of these changes results from multiple interactions among these drivers. Field measurements can address the overall responses to different changing drivers, but are less capable of quantifying the interactions among them. Currently, a comprehensive assessment of the drivers of ecosystem changes, and the magnitude of their direct and indirect impacts on subarctic ecosystems, is missing. The Torneträsk area, in the Swedish subarctic, has an unrivalled history of environmental observation over 100 years, and is one of the most studied sites in the Arctic. In this study, we summarize and rank the drivers of ecosystem change in the Torneträsk area, and propose research priorities identified, by expert assessment, to improve predictions of ecosystem changes. The research priorities identified include understanding impacts on ecosystems brought on by altered frequency and intensity of winter warming events, evapotranspiration rates, rainfall, duration of snow cover and lake-ice, changed soil moisture, and droughts. This case study can help us understand the ongoing ecosystem changes occurring in the Torneträsk area, and contribute to improve predictions of future ecosystem changes at a larger scale. This understanding will provide the basis for the future mitigation and adaptation plans needed in a changing climate.
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| 7. |
- Perryman, Clarice R., et al.
(författare)
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Thaw Transitions and Redox Conditions Drive Methane Oxidation in a Permafrost Peatland
- 2020
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Ingår i: Journal of Geophysical Research - Biogeosciences. - : American Geophysical Union (AGU). - 2169-8953 .- 2169-8961. ; 125:3
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Tidskriftsartikel (refereegranskat)abstract
- Permafrost peatlands are a significant source of methane (CH4) emissions to the atmosphere and could emit more CH4 with continued permafrost thaw. Aerobic methane-oxidizing bacteria may attenuate a substantial fraction of CH4 emissions in thawing permafrost peatlands; however, the impact of permafrost thaw on CH4 oxidation is uncertain. We measured potential CH4 oxidation rates (hereafter, CH4 oxidation) and their predictors using laboratory incubations and in situ porewater redox chemistry across a permafrost thaw gradient of eight thaw stages at Stordalen Mire, a permafrost peatland complex in northernmost Sweden. Methane oxidation rates increased across a gradient of permafrost thaw and differed in transitional thaw stages relative to end-member stages. Oxidation was consistently higher in submerged fens than in bogs or palsas across a range of CH4 concentrations. We also observed that CH4 oxidation increased with decreasing in situ redox potential and was highest in sites with lower redox potential (Eh < 10 mV) and high water table. Our results suggest that redox potential can be used as an important predictor of CH4 oxidation, especially in thawed permafrost peatlands. Our results also highlight the importance of considering transitional thaw stages when characterizing landscape-scale CH4 dynamics, because these transitional areas have different rates and controls of CH4 oxidation relative to intact or completely thawed permafrost areas. As permafrost thaw increases the total area of semiwet and wet thaw stages in permafrost peatlands, CH4 oxidation represents an important control on CH4 emissions to the atmosphere.
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| 8. |
- Varner, Ruth K., et al.
(författare)
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Permafrost thaw driven changes in hydrology and vegetation cover increase trace gas emissions and climate forcing in Stordalen Mire from 1970 to 2014
- 2022
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Ingår i: Philosophical Transactions. Series A. - : The Royal Society. - 1364-503X .- 1471-2962. ; 380:2215
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Tidskriftsartikel (refereegranskat)abstract
- Permafrost thaw increases active layer thickness, changes landscape hydrology and influences vegetation species composition. These changes alter belowground microbial and geochemical processes, affecting production, consumption and net emission rates of climate forcing trace gases. Net carbon dioxide (CO2) and methane (CH4) fluxes determine the radiative forcing contribution from these climate-sensitive ecosystems. Permafrost peatlands may be a mosaic of dry frozen hummocks, semi-thawed or perched sphagnum dominated areas, wet permafrost-free sedge dominated sites and open water ponds. We revisited estimates of climate forcing made for 1970 and 2000 for Stordalen Mire in northern Sweden and found the trend of increasing forcing continued into 2014. The Mire continued to transition from dry permafrost to sedge and open water areas, increasing by 100% and 35%, respectively, over the 45-year period, causing the net radiative forcing of Stordalen Mire to shift from negative to positive. This trend is driven by transitioning vegetation community composition, improved estimates of annual CO2 and CH4 exchange and a 22% increase in the IPCC's 100-year global warming potential (GWP_100) value for CH4. These results indicate that discontinuous permafrost ecosystems, while still remaining a net overall sink of C, can become a positive feedback to climate change on decadal timescales.This article is part of a discussion meeting issue ‘Rising methane: is warming feeding warming? (part 2)’.
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| 9. |
- Wik, Martin, et al.
(författare)
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Sediment Characteristics and Methane Ebullition in Three Subarctic Lakes
- 2018
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Ingår i: Journal of Geophysical Research - Biogeosciences. - 2169-8953 .- 2169-8961. ; 123:8, s. 2399-2411
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Tidskriftsartikel (refereegranskat)abstract
- Ebullition (bubbling) from climate-sensitive northern lakes remains an unconstrained source of atmospheric methane (CH4). Although the focus of many recent studies, ebullition is rarely linked to the physical characteristics of lakes. In this study we analyze the sediments of subarctic postglacial lakes and investigate how sediment properties relate to the large spatial variation in CH4 bubble flux, quantified over multiple years using bubble traps. The results show that the sediments from our lakes are rich in total organic carbon, containing 37 kg/m(3) on average. This number is roughly 40% higher than the average for yedoma deposits, which have been identified as high CH4 emitters. However, the quantity of total organic carbon is not a useful indicator of high emissions from the study lakes. Neither is the amount of CH4 in the sediment a reliable measure of ebullition potential. Instead, our data point to coarse detritus, partly from buried submerged aquatic vegetation and redeposited peat as spatial controls on fluxes, often in combination with previously established effects of incoming solar radiation and water depth. The results once again highlight the climate sensitivity of northern lakes, indicating that biological responses to warmer waters and increased energy input and heating of organic sediments during longer ice-free seasons can substantially alter future CH4 emissions.
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| 10. |
- Deng, Jia, et al.
(författare)
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Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
- 2017
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Ingår i: Journal of Advances in Modeling Earth Systems. - 1942-2466. ; 9:2, s. 1412-1430
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Tidskriftsartikel (refereegranskat)abstract
- Climate change is expected to have significant and uncertain impacts on methane (CH4) emissions from northern peatlands. Biogeochemical models can extrapolate site-specificCH(4) measurements to larger scales and predict responses of CH4 emissions to environmental changes. However, these models include considerable uncertainties and limitations in representing CH4 production, consumption, and transport processes. To improve predictions of CH4 transformations, we incorporated acetate and stable carbon (C) isotopic dynamics associated with CH4 cycling into a biogeochemistry model, DNDC. By including these new features, DNDC explicitly simulates acetate dynamics and the relative contribution of acetotrophic and hydro-genotrophic methanogenesis (AM and HM) to CH4 production, and predicts the C isotopic signature (delta C-13) in soil C pools and emitted gases. When tested against biogeochemical and microbial community observations at two sites in a zone of thawing permafrost in a subarctic peatland in Sweden, the new formulation substantially improved agreement with CH4 production pathways and delta C-13 in emitted CH4 (delta C-13-CH4), a measure of the integrated effects of microbial production and consumption, and of physical transport. We also investigated the sensitivity of simulated delta C-13-CH4 to C isotopic composition of substrates and, to fractionation factors for CH4 production (alpha(AM) and alpha(HM)), CH4 oxidation (alpha(MO)), and plant-mediated CH4 transport (alpha(TP)). The sensitivity analysis indicated that the delta C-13-CH4 is highly sensitive to the factors associated with microbial metabolism (alpha(AM), alpha(HM), and alpha(MO)). The model framework simulating stable C isotopic dynamics provides a robust basis for better constraining and testing microbial mechanisms in predicting CH4 cycling in peatlands.
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| 11. |
- Emerson, Joanne B., et al.
(författare)
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Diverse sediment microbiota shape methane emission temperature sensitivity in Arctic lakes
- 2021
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 12
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Tidskriftsartikel (refereegranskat)abstract
- Northern post-glacial lakes are significant, increasing sources of atmospheric carbon through ebullition (bubbling) of microbially-produced methane (CH4) from sediments. Ebullitive CH4 flux correlates strongly with temperature, reflecting that solar radiation drives emissions. However, here we show that the slope of the temperature-CH4 flux relationship differs spatially across two post-glacial lakes in Sweden. We compared these CH4 emission patterns with sediment microbial (metagenomic and amplicon), isotopic, and geochemical data. The temperature-associated increase in CH4 emissions was greater in lake middles—where methanogens were more abundant—than edges, and sediment communities were distinct between edges and middles. Microbial abundances, including those of CH4-cycling microorganisms and syntrophs, were predictive of porewater CH4 concentrations. Results suggest that deeper lake regions, which currently emit less CH4 than shallower edges, could add substantially to CH4 emissions in a warmer Arctic and that CH4 emission predictions may be improved by accounting for spatial variations in sediment microbiota.
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| 12. |
- Goodrich, Jordan P., et al.
(författare)
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High-frequency measurements of methane ebullition over a growing season at a temperate peatland site
- 2011
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Ingår i: Geophysical Research Letters. - 0094-8276 .- 1944-8007. ; 38, s. L07404-
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Tidskriftsartikel (refereegranskat)abstract
- Bubbles can contribute a significant fraction of methane emissions from wetlands; however the range of reported fractions is very large and accurate characterization of this pathway has proven difficult. Here we show that continuous automated flux chambers combined with an integrated cavity output spectroscopy (ICOS) instrument allow us to quantify both CH(4) ebullition rate and magnitude. For a temperate poor fen in 2009, ebullition rate varied on hourly to seasonal time scales. A diel pattern in ebullition was identified with peak release occurring between 20:00 and 06:00 local time, though steady fluxes (i.e., those with a linear increase in chamber headspace CH(4) concentration) did not exhibit diel variability. Seasonal mean ebullition rates peaked at 843.5 +/- 384.2 events m(-2) d(-1) during the summer, with a mean magnitude of 0.19 mg CH(4) released in each event.
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| 13. |
- Hough, Moira, et al.
(författare)
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Coupling plant litter quantity to a novel metric for litter quality explains C storage changes in a thawing permafrost peatland
- 2022
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Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 28:3, s. 950-968
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Tidskriftsartikel (refereegranskat)abstract
- Permafrost thaw is a major potential feedback source to climate change as it can drive the increased release of greenhouse gases carbon dioxide (CO2) and methane (CH4). This carbon release from the decomposition of thawing soil organic material can be mitigated by increased net primary productivity (NPP) caused by warming, increasing atmospheric CO2, and plant community transition. However, the net effect on C storage also depends on how these plant community changes alter plant litter quantity, quality, and decomposition rates. Predicting decomposition rates based on litter quality remains challenging, but a promising new way forward is to incorporate measures of the energetic favorability to soil microbes of plant biomass decomposition. We asked how the variation in one such measure, the nominal oxidation state of carbon (NOSC), interacts with changing quantities of plant material inputs to influence the net C balance of a thawing permafrost peatland. We found: (1) Plant productivity (NPP) increased post-thaw, but instead of contributing to increased standing biomass, it increased plant biomass turnover via increased litter inputs to soil; (2) Plant litter thermodynamic favorability (NOSC) and decomposition rate both increased post-thaw, despite limited changes in bulk C:N ratios; (3) these increases caused the higher NPP to cycle more rapidly through both plants and soil, contributing to higher CO2 and CH4 fluxes from decomposition. Thus, the increased C-storage expected from higher productivity was limited and the high global warming potential of CH4 contributed a net positive warming effect. Although post-thaw peatlands are currently C sinks due to high NPP offsetting high CO2 release, this status is very sensitive to the plant community's litter input rate and quality. Integration of novel bioavailability metrics based on litter chemistry, including NOSC, into studies of ecosystem dynamics, is needed to improve the understanding of controls on arctic C stocks under continued ecosystem transition.
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| 14. |
- Kashi, N. Niloufar, et al.
(författare)
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Nutrients Alter Methane Production and Oxidation in a Thawing Permafrost Mire
- 2023
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Ingår i: Ecosystems. - : Springer. - 1432-9840 .- 1435-0629. ; 26, s. 302-317
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Tidskriftsartikel (refereegranskat)abstract
- Permafrost thaw releases nutrients and metals from previously frozen soils and these nutrients may affect important biogeochemical processes including methane (CH4) production and oxidation. Here we assessed how concentrations of nutrients, solutes, and metals varied across four plant communities undergoing permafrost thaw and if these geochemical characteristics affected rates of CH4 production and oxidation. We tested nutrient limitation in CH4 production and oxidation by experimentally adding nitrogen (N), phosphorus (P) and a permafrost leachate to peat across these four plant communities. The upper 20 cm of permafrost contained 715 ± 298 mg m−2 of extractable inorganic N and 20 ± 6 mg m−2 of resin-extractable phosphorus (Presin), for a N:P ratio of 36:1. These low amounts of Presin coincide with high acid-digestible aluminum (Al), iron (Fe), and P concentrations in the permafrost soil and suggest that P may accumulate via sorption and constrain easily available forms of P for plants and microbes. Permafrost leachate additions decreased potential CH4 production rates up to 80% and decreased CH4 oxidation rates by 66%, likely due to inhibitory effects of N in the permafrost. In contrast, organic and inorganic P additions increased CH4 oxidation rates up to 36% in the tall graminoid fen, a community where phosphate availability was low and CH4 production was high. Our results suggest that (1) inorganic N is available immediately from permafrost thaw, while (2) P availability is controlled by sorption properties, and (3) plant community, nutrient stoichiometry, and metal availability modulate how permafrost thaw affects CH4 production and oxidation.
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| 15. |
- Kuhn, McKenzie A., et al.
(författare)
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BAWLD-CH4 : a comprehensive dataset of methane fluxes from boreal and arctic ecosystems
- 2021
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Ingår i: Earth System Science Data. - : Copernicus Gesellschaft MBH. - 1866-3508 .- 1866-3516. ; 13:11, s. 5151-5189
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Tidskriftsartikel (refereegranskat)abstract
- Methane (CH4) emissions from the boreal and arctic region are globally significant and highly sensitive to climate change. There is currently a wide range in estimates of high-latitude annual CH4 fluxes, where estimates based on land cover inventories and empirical CH4 flux data or process models (bottom-up approaches) generally are greater than atmospheric inversions (top-down approaches). A limitation of bottom-up approaches has been the lack of harmonization between inventories of site-level CH4 flux data and the land cover classes present in high-latitude spatial datasets. Here we present a comprehensive dataset of small-scale, surface CH4 flux data from 540 terrestrial sites (wetland and non-wetland) and 1247 aquatic sites (lakes and ponds), compiled from 189 studies. The Boreal-Arctic Wetland and Lake Methane Dataset (BAWLD-CH4) was constructed in parallel with a compatible land cover dataset, sharing the same land cover classes to enable refined bottom-up assessments. BAWLD-CH4 includes information on site-level CH4 fluxes but also on study design (measurement method, timing, and frequency) and site characteristics (vegetation, climate, hydrology, soil, and sediment types, permafrost conditions, lake size and depth, and our determination of land cover class). The different land cover classes had distinct CH4 fluxes, resulting from definitions that were either based on or co-varied with key environmental controls. Fluxes of CH4 from terrestrial ecosystems were primarily influenced by water table position, soil temperature, and vegetation composition, while CH4 fluxes from aquatic ecosystems were primarily influenced by water temperature, lake size, and lake genesis. Models could explain more of the between-site variability in CH4 fluxes for terrestrial than aquatic ecosystems, likely due to both less precise assessments of lake CH4 fluxes and fewer consistently reported lake site characteristics. Analysis of BAWLD-CH4 identified both land cover classes and regions within the boreal and arctic domain, where future studies should be focused, alongside methodological approaches. Overall, BAWLD-CH4 provides a comprehensive dataset of CH4 emissions from high-latitude ecosystems that are useful for identifying research opportunities, for comparison against new field data, and model parameterization or validation.
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| 16. |
- Li, Zhen, et al.
(författare)
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Soil incubation methods lead to large differences in inferred methane production temperature sensitivity
- 2024
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Ingår i: Environmental Research Letters. - 1748-9326. ; 19:4
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Tidskriftsartikel (refereegranskat)abstract
- Quantifying the temperature sensitivity of methane (CH4) production is crucial for predicting how wetland ecosystems will respond to climate warming. Typically, the temperature sensitivity (often quantified as a Q10 value) is derived from laboratory incubation studies and then used in biogeochemical models. However, studies report wide variation in incubation-inferred Q10 values, with a large portion of this variation remaining unexplained. Here we applied observations in a thawing permafrost peatland (Stordalen Mire) and a well-tested process-rich model (ecosys) to interpret incubation observations and investigate controls on inferred CH4 production temperature sensitivity. We developed a field-storage-incubation modeling approach to mimic the full incubation sequence, including field sampling at a particular time in the growing season, refrigerated storage, and laboratory incubation, followed by model evaluation. We found that CH4 production rates during incubation are regulated by substrate availability and active microbial biomass of key microbial functional groups, which are affected by soil storage duration and temperature. Seasonal variation in substrate availability and active microbial biomass of key microbial functional groups led to strong time-of-sampling impacts on CH4 production. CH4 production is higher with less perturbation post-sampling, i.e. shorter storage duration and lower storage temperature. We found a wide range of inferred Q10 values (1.2–3.5), which we attribute to incubation temperatures, incubation duration, storage duration, and sampling time. We also show that Q10 values of CH4 production are controlled by interacting biological, biochemical, and physical processes, which cause the inferred Q10 values to differ substantially from those of the component processes. Terrestrial ecosystem models that use a constant Q10 value to represent temperature responses may therefore predict biased soil carbon cycling under future climate scenarios.
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| 17. |
- Nguyen, Thanh Duc, et al.
(författare)
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Technical note: Greenhouse gas flux studies: an automated online system for gas emission measurements in aquatic environments
- 2020
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Ingår i: Hydrology and Earth System Sciences. - : COPERNICUS GESELLSCHAFT MBH. - 1027-5606 .- 1607-7938. ; 24:7, s. 3417-3430
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Tidskriftsartikel (refereegranskat)abstract
- Aquatic ecosystems are major sources of greenhouse gases (GHGs). Robust measurements of natural GHG emissions are vital for evaluating regional to global carbon budgets and for assessing climate feedbacks of natural emissions to improve climate models. Diffusive and ebullitive (bubble) transport are two major pathways of gas release from surface waters. To capture the high temporal variability of these fluxes in a well-defined footprint, we designed and built an inexpensive device that includes an easily mobile diffusive flux chamber and a bubble counter all in one. In addition to automatically collecting gas samples for subsequent various analyses in the laboratory, this device also utilized a low-cost carbon dioxide (CO2) sensor (SenseAir, Sweden) and methane (CH4) sensor (Figaro, Japan) to measure GHG fluxes. Each of the devices was equipped with an XBee module to enable local radio communication (DigiMesh network) for time synchronization and data readout at a server controller station on the lakeshore. The software of this server controller was operated on a lowcost computer (Raspberry Pi), which has a 3G connection for remote control and monitor functions from anywhere in the world. This study shows the potential of a low-cost automatic sensor network system for studying GHG fluxes on lakes in remote locations.
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| 18. |
- Nguyen, Thanh, et al.
(författare)
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Technical note : Greenhouse gas flux studies
- 2020
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Ingår i: Hydrology and Earth System Sciences. - : Copernicus GmbH. - 1027-5606 .- 1607-7938. ; 24:7, s. 3417-3430
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Tidskriftsartikel (refereegranskat)abstract
- Aquatic ecosystems are major sources of greenhouse gases (GHGs). Robust measurements of natural GHG emissions are vital for evaluating regional to global carbon budgets and for assessing climate feedbacks of natural emissions to improve climate models. Diffusive and ebullitive (bubble) transport are two major pathways of gas release from surface waters. To capture the high temporal variability of these fluxes in a well-defined footprint, we designed and built an inexpensive device that includes an easily mobile diffusive flux chamber and a bubble counter all in one. In addition to automatically collecting gas samples for subsequent various analyses in the laboratory, this device also utilized a low-cost carbon dioxide (CO2) sensor (SenseAir, Sweden) and methane (CH4) sensor (Figaro, Japan) to measure GHG fluxes. Each of the devices was equipped with an XBee module to enable local radio communication (DigiMesh network) for time synchronization and data readout at a server controller station on the lakeshore. The software of this server controller was operated on a lowcost computer (Raspberry Pi), which has a 3G connection for remote control and monitor functions from anywhere in the world. This study shows the potential of a low-cost automatic sensor network system for studying GHG fluxes on lakes in remote locations.
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| 19. |
- Santoni, Gregory W., et al.
(författare)
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Mass fluxes and isofluxes of methane (ch4) at a new hampshire fen measured by a continuous wave quantum cascade laser spectrometer
- 2012
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Ingår i: Journal of Geophysical Research. - 0148-0227 .- 2156-2202. ; 117, s. D10301-
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Tidskriftsartikel (refereegranskat)abstract
- We have developed a mid-infrared continuous-wave quantum cascade laser direct-absorption spectrometer (QCLS) capable of high frequency (>= 1 Hz) measurements of (CH4)-C-12 and (CH4)-C-13 isotopologues of methane (CH4) with in situ 1-s RMS delta C-13(CH4) precision of 1.5 parts per thousand and Allan-minimum precision of 0.2 parts per thousand. We deployed this QCLS in a well-studied New Hampshire fen to compare measurements of CH4 isoflux by eddy covariance (EC) to Keeling regressions of data from automated flux chamber sampling. Mean CH4 fluxes of 6.5 +/- 0.7 mg CH4 m(-2) hr(-1) over two days of EC sampling in July, 2009 were indistinguishable from mean autochamber CH4 fluxes (6.6 +/- 0.8 mgCH(4) m(-2) hr(-1)) over the same period. Mean delta C-13(CH4) composition of emitted CH4 calculated using EC isoflux methods was -71 +/- 8 parts per thousand (95% C.I.) while Keeling regressions of 332 chamber closing events over 8 days yielded a corresponding value of -64.5 +/- 0.8 parts per thousand Ebullitive fluxes, representing similar to 10% of total CH4 fluxes at this site, were on average 1.2 parts per thousand enriched in C-13 compared to diffusive fluxes. CH4 isoflux time series have the potential to improve process-based understanding of methanogenesis, fully characterize source isotopic distributions, and serve as additional constraints for both regional and global CH4 modeling analysis.
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| 20. |
- Treat, Claire C., et al.
(författare)
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Permafrost Carbon : Progress on Understanding Stocks and Fluxes Across Northern Terrestrial Ecosystems
- 2024
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Ingår i: Journal of Geophysical Research - Biogeosciences. - : American Geophysical Union (AGU). - 2169-8953 .- 2169-8961. ; 129:3
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Tidskriftsartikel (refereegranskat)abstract
- Significant progress in permafrost carbon science made over the past decades include the identification of vast permafrost carbon stocks, the development of new pan-Arctic permafrost maps, an increase in terrestrial measurement sites for CO2 and methane fluxes, and important factors affecting carbon cycling, including vegetation changes, periods of soil freezing and thawing, wildfire, and other disturbance events. Process-based modeling studies now include key elements of permafrost carbon cycling and advances in statistical modeling and inverse modeling enhance understanding of permafrost region C budgets. By combining existing data syntheses and model outputs, the permafrost region is likely a wetland methane source and small terrestrial ecosystem CO2 sink with lower net CO2 uptake toward higher latitudes, excluding wildfire emissions. For 2002–2014, the strongest CO2 sink was located in western Canada (median: −52 g C m−2 y−1) and smallest sinks in Alaska, Canadian tundra, and Siberian tundra (medians: −5 to −9 g C m−2 y−1). Eurasian regions had the largest median wetland methane fluxes (16–18 g CH4 m−2 y−1). Quantifying the regional scale carbon balance remains challenging because of high spatial and temporal variability and relatively low density of observations. More accurate permafrost region carbon fluxes require: (a) the development of better maps characterizing wetlands and dynamics of vegetation and disturbances, including abrupt permafrost thaw; (b) the establishment of new year-round CO2 and methane flux sites in underrepresented areas; and (c) improved models that better represent important permafrost carbon cycle dynamics, including non-growing season emissions and disturbance effects.
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| 21. |
- Wik, Martin, et al.
(författare)
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Climate-sensitive northern lakes and ponds are critical components of methane release
- 2016
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Ingår i: Nature Geoscience. - : NATURE PUBLISHING GROUP. - 1752-0894 .- 1752-0908. ; 9:2, s. 99-
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Forskningsöversikt (refereegranskat)abstract
- Lakes and ponds represent one of the largest natural sources of the greenhouse gas methane. By surface area, almost half of these waters are located in the boreal region and northwards. A synthesis of measurements of methane emissions from 733 lakes and ponds north of similar to 50 degrees N, combined with new inventories of inland waters, reveals that emissions from these high latitudes amount to around 16.5 Tg CH4 yr(-1) (12.4 Tg CH4-C yr(-1)). This estimate - from lakes and ponds alone - is equivalent to roughly two-thirds of the inverse model calculation of all natural methane sources in the region. Thermokarst water bodies have received attention for their high emission rates, but we find that post-glacial lakes are a larger regional source due to their larger areal extent. Water body depth, sediment type and ecoclimatic region are also important in explaining variation in methane fluxes. Depending on whether warming and permafrost thaw cause expansion or contraction of lake and pond areal coverage, we estimate that annual water body emissions will increase by 20-54% before the end of the century if ice-free seasons are extended by 20 days. We conclude that lakes and ponds are a dominant methane source at high northern latitudes.
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| 22. |
- Wik, Martin, 1982-, et al.
(författare)
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Climate-sensitive northern lakes and ponds are critical components of methane release
- 2016
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Ingår i: Nature Geoscience. - : Springer Science and Business Media LLC. - 1752-0894 .- 1752-0908. ; 9, s. 99-105
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Forskningsöversikt (refereegranskat)abstract
- Lakes and ponds represent one of the largest natural sources of the greenhouse gas methane. By surface area, almost half of these waters are located in the boreal region and northwards. A synthesis of measurements of methane emissions from 733 lakes and ponds north of ~50° N, combined with new inventories of inland waters, reveals that emissions from these high latitudes amount to around 16.5 Tg CH4 yr−1 (12.4 Tg CH4-C yr−1). This estimate — from lakes and ponds alone — is equivalent to roughly two-thirds of the inverse model calculation of all natural methane sources in the region. Thermokarst water bodies have received attention for their high emission rates, but we find that post-glacial lakes are a larger regional source due to their larger areal extent. Water body depth, sediment type and ecoclimatic region are also important in explaining variation in methane fluxes. Depending on whether warming and permafrost thaw cause expansion or contraction of lake and pond areal coverage, we estimate that annual water body emissions will increase by 20–54% before the end of the century if ice-free seasons are extended by 20 days. We conclude that lakes and ponds are a dominant methane source at high northern latitudes.
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| 23. |
- Wik, Martin, et al.
(författare)
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Energy input is primary controller of methane bubbling in subarctic lakes
- 2014
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Ingår i: Geophysical Research Letters. - : Wiley-Blackwell. - 0094-8276 .- 1944-8007. ; 41:2, s. 555-560
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Tidskriftsartikel (refereegranskat)abstract
- Emission of methane (CH4) from surface waters is often dominated by ebullition (bubbling), a transport mode with high-spatiotemporal variability. Based on new and extensive CH4 ebullition data, we demonstrate striking correlations (r(2) between 0.92 and 0.997) when comparing seasonal bubble CH4 flux from three shallow subarctic lakes to four readily measurable proxies of incoming energy flux and daily flux magnitudes to surface sediment temperature (r(2) between 0.86 and 0.94). Our results after continuous multiyear sampling suggest that CH4 ebullition is a predictable process, and that heat flux into the lakes is the dominant driver of gas production and release. Future changes in the energy received by lakes and ponds due to shorter ice-covered seasons will predictably alter the ebullitive CH4 flux from freshwater systems across northern landscapes. This finding is critical for our understanding of the dynamics of radiatively important trace gas sources and associated climate feedback.
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| 24. |
- Wik, Martin, et al.
(författare)
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Large isotopic variations and similarities in methane ebullition from northern lakes
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Annan publikation (övrigt vetenskapligt/konstnärligt)abstract
- Lakes are abundant in northern, high latitude landscapes and considered a substantial source of atmospheric methane (CH4). In spite of this, little is known about how CH4 release mechanisms relate to underlying organic sources and biogenic production pathways in different types of water bodies. Here, we present a substantial, multiyear dataset of the stable isotopes of CH4 ebullition from three interconnected, subarctic post-glacial lakes. The δ13C-CH4 and δD-CH4 vary from -78.4 to -53.1‰ and from -369.8 to -218.8‰, respectively. Overall, these observations suggest predominantly acetoclastic methanogenesis in the shallow zones, possibly fueled by in-situ plant production, and a shift towards a mix with hydrogenotrophy at depth. The bubbles’ δ13C-CH4 are similar to most of those reported from other northern natural systems, but we found differences in δD-CH4, possibly due to evaporation-driven fractionation over summer. Stable isotopes provide valuable information about underlying organic sources and production pathways, however, due to large overlaps they may not be effective in reducing uncertainties in emissions potentials among different water body types, and in general between lakes and wetlands.
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| 25. |
- Wik, Martin, et al.
(författare)
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Multiyear measurements of ebullitive methane flux from three subarctic lakes
- 2013
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Ingår i: Journal of Geophysical Research - Biogeosciences. - : American Geophysical Union (AGU). - 2169-8953 .- 2169-8961. ; 118:3, s. 1307-1321
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Tidskriftsartikel (refereegranskat)abstract
- Ebullition (bubbling) from small lakes and ponds at high latitudes is an important yet unconstrained source of atmospheric methane (CH4). Small water bodies are most abundant in permanently frozen peatlands, and it is speculated that their emissions will increase as the permafrost thaws. We made 6806 measurements of CH4 ebullition during four consecutive summers using a total of 40 bubble traps that were systematically distributed across the depth zones of three lakes in a sporadic permafrost landscape in northernmost Sweden. We identified significant spatial and temporal variations in ebullition and observed a large spread in the bubbles' CH4 concentration, ranging from 0.04% to 98.6%. Ebullition followed lake temperatures, and releases were significantly larger during periods with decreasing atmospheric pressure. Although shallow zone ebullition dominated the seasonal bubble CH4 flux, we found a shift in the depth dependency towards higher fluxes from intermediate and deep zones in early fall. The average daily flux of 13.4mg CH4 m(-2) was lower than those measured in most other high-latitude lakes. Locally, however, our study lakes are a substantial CH4 source; we estimate that 350kg of CH4 is released via ebullition during summer (June-September), which is approximately 40% of total whole year emissions from the nearby peatland. In order to capture the large variability and to accurately scale lake CH4 ebullition temporally and spatially, frequent measurements over long time periods are critical.
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| 26. |
- Wik, Martin, et al.
(författare)
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Stable Methane Isotopologues From Northern Lakes Suggest That Ebullition Is Dominated by Sub-Lake Scale Processes
- 2020
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Ingår i: Journal of Geophysical Research - Biogeosciences. - 2169-8953 .- 2169-8961. ; 125:10
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Tidskriftsartikel (refereegranskat)abstract
- Stable isotopes have emerged as popular study targets when investigating emission of methane (CH4) from lakes. Yet little is known on how isotopic patterns conform to variations in emission magnitudes—a highly relevant question. Here, we present a large multiyear data set on stable isotopes of CH4 ebullition (bubbling) from three small adjacent subarctic lakes. The δ13C‐CH4 and δD‐CH4 range from −78.4‰ to −53.1‰ and from −369.8‰ to −218.8‰, respectively, and vary greatly among the lakes. The signatures suggest dominant hydrogenotrophic methanogenesis, particularly in the deep zones, but there are also signals of seemingly acetoclastic production in some high fluxing shallow areas, possibly fueled by in situ vegetation, but in‐sediment anaerobic CH4 oxidation cannot be ruled out as an alternative cause. The observed patterns, however, are not consistent across the lakes. Neither do they correspond to the spatiotemporal variations in the measured bubble CH4 fluxes. Patterns of acetoclastic and hydrogenotrophic production plus oxidation demonstrate that gains and losses of sediment CH4 are dominated by sub‐lake scale processes. The δD‐CH4 in the bubbles was significantly different depending on measurement month, likely due to evaporation effects. On a larger scale, our isotopic data, combined with those from other lakes, show a significant difference in bubble δD‐CH4 between postglacial and thermokarst lakes, an important result for emission inventories. Although this characteristic theoretically assists in source partitioning studies, most hypothetical future shifts in δD‐CH4 due to high‐latitude lake area or production pathway are too small to lead to atmospheric changes detectable with current technology.
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| 27. |
- Wilson, Rachel M., et al.
(författare)
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Plant organic matter inputs exert a strong control on soil organic matter decomposition in a thawing permafrost peatland
- 2022
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Ingår i: Science of the Total Environment. - : Elsevier BV. - 0048-9697 .- 1879-1026. ; 820
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Tidskriftsartikel (refereegranskat)abstract
- Peatlands are climate critical carbon (C) reservoirs that could become a C source under continued warming. A strong relationship between plant tissue chemistry and the soil organic matter (SOM) that fuels C gas emissions is inferred, but rarely examined at the molecular level. Here we compared Fourier transform infrared (FT-IR) spectroscopy measurements of solid phase functionalities in plants and SOM to ultra-high-resolution mass spectrometric analyses of plant and SOM water extracts across a palsa-bog-fen thaw and moisture gradient in an Arctic peatland. From these analyses we calculated the C oxidation state (NOSC), a measure which can be used to assess organic matter quality. Palsa plant extracts had the highest NOSC, indicating high quality, whereas extracts of Sphagnum, which dominated the bog, had the lowest NOSC. The percentage of plant compounds that are less bioavailable and accumulate in the peat, increases from palsa (25%) to fen (41%) to bog (47%), reflecting the pattern of percent Sphagnum cover. The pattern of NOSC in the plant extracts was consistent with the high number of consumed compounds in the palsa and low number of consumed compounds in the bog. However, in the FT-IR analysis of the solid phase bog peat, carbohydrate content was high implying high quality SOM. We explain this discrepancy as the result of low solubilization of bog SOM facilitated by the low pH in the bog which makes the solid phase carbohydrates less available to microbial decomposition. Plant-associated condensed aromatics, tannins, and lignin-like compounds declined in the unsaturated palsa peat indicating decomposition, but lignin-like compounds accumulated in the bog and fen peat where decomposition was presumably inhibited by the anaerobic conditions. A molecular-level comparison of the aboveground C sources and peat SOM demonstrates that climate-associated vegetation shifts in peatlands are important controls on the mechanisms underlying changing C gas emissions.
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