| 11. |
- Cuapio, Angelica, et al.
(författare)
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NK cell frequencies, function and correlates to vaccine outcome in BNT162b2 mRNA anti-SARS-CoV-2 vaccinated healthy and immunocompromised individuals
- 2022
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Ingår i: Molecular Medicine. - : BioMed Central (BMC). - 1076-1551 .- 1528-3658. ; 28:1
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Tidskriftsartikel (refereegranskat)abstract
- Adaptive immune responses have been studied extensively in the course of mRNA vaccination against COVID-19. Considerably fewer studies have assessed the effects on innate immune cells. Here, we characterized NK cells in healthy individuals and immunocompromised patients in the course of an anti-SARS-CoV-2 BNT162b2 mRNA prospective, open-label clinical vaccine trial. See trial registration description in notes. Results revealed preserved NK cell numbers, frequencies, subsets, phenotypes, and function as assessed through consecutive peripheral blood samplings at 0, 10, 21, and 35 days following vaccination. A positive correlation was observed between the frequency of NKG2C+ NK cells at baseline (Day 0) and anti-SARS-CoV-2 Ab titers following BNT162b2 mRNA vaccination at Day 35. The present results provide basic insights in regards to NK cells in the context of mRNA vaccination, and have relevance for future mRNA-based vaccinations against COVID-19, other viral infections, and cancer.Trial registration: The current study is based on clinical material from the COVAXID open-label, non-randomized prospective clinical trial registered at EudraCT and clinicaltrials.gov (no. 2021–000175-37). Description: https://clinicaltrials.gov/ct2/show/NCT04780659?term=2021-000175-37&draw=2&rank=1.
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| 12. |
- Delley, Diane, et al.
(författare)
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ASTER: Developing a Platform to Achieve Microgravity for Low-Cost Experiments
- 2021
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Ingår i: IAC 2021 Congress Proceedings, 72nd International Astronautical Congress (IAC), Dubai, United Arab Emirates. - : International Astronautical Federation, IAF.
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Konferensbidrag (refereegranskat)abstract
- Microgravity is an important field of research, which is vital for the efficient future utilisation of space. It is possible to undertake microgravity experiments on-orbit, however, this is often well outside the available funding range of low-cost experiments. Microgravity experiments undertaken on sounding rockets are more accessible to low-budget institutions and students, and provide longer periods of sustained microgravity than drop towers and parabolic flights. However, unless stabilised, such experiments cannot achieve true microgravity conditions due to residual external forces, such as the centrifugal force of the rocket’s spin, acting on the experiment. Thus, projects that want to carry out experiments in microgravity conditions would first need to design the platform required to achieve true microgravity, making these projects more complex and time intensive.Project ASTER (Attitude STabilised free falling ExpeRiment) is designing and testing such a platform for microgravity research. ASTER is taking advantage of the extended microgravity period of a sounding rocket flight to test a high performance, low-cost Attitude Control System (ACS) solution capable of providing microgravity conditions for experiments. This would greatly benefit both future satellite projects and sounding rocket experiments which require highly accurate stabilisation and pointing capabilities. The design utilises three reaction wheels controlled by a closed loop system to stabilise a Free Falling Unit - ejected from a sounding rocket - within seconds. The platform will be able to perform slewing manoeuvres and accommodate future experiments on easily adaptable mounting points which allow for on-board sensors and cameras. ASTER will be launched on-board REXUS 30 in March 2022, after which it will be recovered and the obtained results will be published on an open source basis to ensure its future availability to student and other low budget research projects, thereby allowing further improvement, optimisation, and customisation. ASTER is aiming to establish a platform which simplifies the development of microgravity experiments, especially for student projects which often face tight schedules and limited resources. ASTER is being developed as part of the 13th Cycle of the German-Swedish student programme REXUS/BEXUS by students of Luleå University of Technology (LTU) at the Kiruna Space Campus.
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| 13. |
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| 14. |
- Dox, Inge, et al.
(författare)
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Wood growth phenology and its relationship with leaf phenology in deciduous forest trees of the temperate zone of Western Europe
- 2022
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Ingår i: Agricultural and Forest Meteorology. - : Elsevier. - 0168-1923 .- 1873-2240. ; 327
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Tidskriftsartikel (refereegranskat)abstract
- Wood growth phenology of temperate deciduous trees is less studied than leaf phenology, hindering the understanding of their interaction. In order to describe the variability of wood growth and leaf phenology across locations, species and years, we performed phenological observations of both xylem formation and leaf development in three typical temperate forest areas in Western Europe (Northern Spain, Belgium and Southern Norway) for four common deciduous tree species (Fagus sylvatica L., Betula pendula Roth., Populus tremula L. and Quercus robur L.) in 2018, 2019 and 2020, with only beech and birch being studied in the final year. The earliest cambial reactivation in spring occurred at the Belgian stands while the end of cambial activity and wood growth cessation generally occurred first in Norway. Results did not show much consistency across species, sites or years and lacked general patterns, except for the end of cambial activity, which occurred generally first in birch. For all species, the site variation in phenophases (up to three months) was substantially larger than the inter-annual variability (up to six weeks). The timeline of bud-burst and cambium reactivation, as well as of foliar senescence and cessation of wood growth, were variable across species even with the same type of wood porosity. Our results suggest that wood growth and leaf phenology are less well connected than previously thought. Linear models showed that temperature is the dominant driver of wood growth phenology, but with climate zone also having an effect, especially at the start of the growing season. Drought conditions, on the other hand, have a larger effect on the timing of wood growth cessation. Our comprehensive analysis represents the first large regional assessment of wood growth phenology in common European deciduous tree species, providing not only new fundamental insights but also a unique dataset for future modelling applications.
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| 15. |
- Eriksson, Kimmo, et al.
(författare)
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Perceptions of the appropriate response to norm violation in 57 societies
- 2021
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Ingår i: Nature Communications. - : Nature Research. - 2041-1723. ; 12:1
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Tidskriftsartikel (refereegranskat)abstract
- Norm enforcement may be important for resolving conflicts and promoting cooperation. However, little is known about how preferred responses to norm violations vary across cultures and across domains. In a preregistered study of 57 countries (using convenience samples of 22,863 students and non-students), we measured perceptions of the appropriateness of various responses to a violation of a cooperative norm and to atypical social behaviors. Our findings highlight both cultural universals and cultural variation. We find a universal negative relation between appropriateness ratings of norm violations and appropriateness ratings of responses in the form of confrontation, social ostracism and gossip. Moreover, we find the country variation in the appropriateness of sanctions to be consistent across different norm violations but not across different sanctions. Specifically, in those countries where use of physical confrontation and social ostracism is rated as less appropriate, gossip is rated as more appropriate. Little is known about peoples preferred responses to norm violations across countries. Here, in a study of 57 countries, the authors highlight cultural similarities and differences in peoples perception of the appropriateness of norm violations.
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| 16. |
- Fronczek, Jakub, et al.
(författare)
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Relationship between the Clinical Frailty Scale and short-term mortality in patients ≥ 80 years old acutely admitted to the ICU : a prospective cohort study
- 2021
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Ingår i: Critical Care. - : BioMed Central (BMC). - 1364-8535 .- 1466-609X. ; 25:1
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Tidskriftsartikel (refereegranskat)abstract
- BACKGROUND: The Clinical Frailty Scale (CFS) is frequently used to measure frailty in critically ill adults. There is wide variation in the approach to analysing the relationship between the CFS score and mortality after admission to the ICU. This study aimed to evaluate the influence of modelling approach on the association between the CFS score and short-term mortality and quantify the prognostic value of frailty in this context.METHODS: We analysed data from two multicentre prospective cohort studies which enrolled intensive care unit patients ≥ 80 years old in 26 countries. The primary outcome was mortality within 30-days from admission to the ICU. Logistic regression models for both ICU and 30-day mortality included the CFS score as either a categorical, continuous or dichotomous variable and were adjusted for patient's age, sex, reason for admission to the ICU, and admission Sequential Organ Failure Assessment score.RESULTS: The median age in the sample of 7487 consecutive patients was 84 years (IQR 81-87). The highest fraction of new prognostic information from frailty in the context of 30-day mortality was observed when the CFS score was treated as either a categorical variable using all original levels of frailty or a nonlinear continuous variable and was equal to 9% using these modelling approaches (p < 0.001). The relationship between the CFS score and mortality was nonlinear (p < 0.01).CONCLUSION: Knowledge about a patient's frailty status adds a substantial amount of new prognostic information at the moment of admission to the ICU. Arbitrary simplification of the CFS score into fewer groups than originally intended leads to a loss of information and should be avoided. Trial registration NCT03134807 (VIP1), NCT03370692 (VIP2).
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| 17. |
- Gao, Yu, et al.
(författare)
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Immunodeficiency syndromes differentially impact the functional profile of SARS-CoV-2-specific T cells elicited by mRNA vaccination
- 2022
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Ingår i: Immunity. - : Elsevier. - 1074-7613 .- 1097-4180. ; 55:9, s. 1732-1746.e5
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Tidskriftsartikel (refereegranskat)abstract
- Many immunocompromised patients mount suboptimal humoral immunity after SARS-CoV-2 mRNA vaccination. Here, we assessed the single-cell profile of SARS-CoV-2-specific T cells post-mRNA vaccination in healthy individuals and patients with various forms of immunodeficiencies. Impaired vaccine-induced cell-mediated immunity was observed in many immunocompromised patients, particularly in solid-organ transplant and chronic lymphocytic leukemia patients. Notably, individuals with an inherited lack of mature B cells, i.e., X-linked agammaglobulinemia (XLA) displayed highly functional spike-specific T cell responses. Single-cell RNA-sequencing further revealed that mRNA vaccination induced a broad functional spectrum of spike-specific CD4+ and CD8+ T cells in healthy individuals and patients with XLA. These responses were founded on polyclonal repertoires of CD4+ T cells and robust expansions of oligoclonal effector-memory CD45RA+ CD8+ T cells with stem-like characteristics. Collectively, our data provide the functional continuum of SARS-CoV-2-specific T cell responses post-mRNA vaccination, highlighting that cell-mediated immunity is of variable functional quality across immunodeficiency syndromes.
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| 18. |
- George, Jan Peter, et al.
(författare)
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Method comparison of indirect assessments of understory leaf area index (LAIu) : A case study across the extended network of ICOS forest ecosystem sites in Europe
- 2021
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Ingår i: Ecological Indicators. - : Elsevier BV. - 1470-160X .- 1872-7034. ; 128
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Tidskriftsartikel (refereegranskat)abstract
- Leaf area index (LAI) is a key ecological indicator for describing the structure of canopies and for modelling energy exchange between atmosphere and biosphere. While LAI of the forest overstory can be accurately assessed over large spatial scales via remote sensing, LAI of the forest understory (LAIu) is still largely ignored in ecological studies and ecosystem modelling due to the fact that it is often too complex to be destructively sampled or approximated by other site parameters. Additionally, so far only few attempts have been made to retrieve understory LAI via remote sensing, because dense canopies with high LAI are often hindering retrieval algorithms to produce meaningful estimates for understory LAI. Consequently, the forest understory still constitutes a poorly investigated research realm impeding ecological studies to properly account for its contribution to the energy absorption capacity of forest stands. This study aims to compare three conceptually different indirect retrieval methodologies for LAIu over a diverse panel of forest understory types distributed across Europe. For this we carried out near-to-surface measurements of understory reflectance spectra as well as digital surface photography over the extended network of Integrated Carbon Observation System (ICOS) forest ecosystem sites. LAIu was assessed by exploiting the empirical relationship between vegetation cover and light absorption (Beer-Lambert- Bouguer law) as well as by utilizing proposed relationships with two prominent vegetation indices: normalized difference vegetation index (NDVI) and simple ratio (SR). Retrievals from the three methods were significantly correlated with each other (r = 0.63–0.99, RMSE = 0.53–0.72), but exhibited also significant bias depending on the LAI scale. The NDVI based retrieval approach most likely overestimates LAI at productive sites when LAIu > 2, while the simple ratio algorithm overestimates LAIu at sites with sparse understory vegetation and presence of litter or bare soil. The purely empirical method based on the Beer-Lambert law of light absorption seems to offer a good compromise, since it provides reasonable LAIu values at both low and higher LAI ranges. Surprisingly, LAIu variation among sites seems to be largely decoupled from differences in climate and light permeability of the overstory, but significantly increased with vegetation diversity (expressed as species richness) and hence proposes new applications of LAIu in ecological modelling.
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| 19. |
- Grothe, Michel J., 1981, et al.
(författare)
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Differential diagnosis of amnestic dementia patients based on an FDG-PET signature of autopsy-confirmed LATE-NC.
- 2022
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Ingår i: Alzheimer's & dementia : the journal of the Alzheimer's Association. - : Wiley. - 1552-5279. ; 19:4, s. 1234-44
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Tidskriftsartikel (refereegranskat)abstract
- Limbic age-related TDP-43 encephalopathy neuropathologic change (LATE-NC) is common in advanced age and can underlie a clinical presentation mimicking Alzheimer's disease (AD). We studied whether an autopsy-derived fluorodeoxyglucose positron emission tomography (FDG-PET) signature of LATE-NC provides clinical utility for differential diagnosis of amnestic dementia patients.Ante mortem FDG-PET patterns from autopsy-confirmed LATE-NC (N = 7) and AD (N = 23) patients were used to stratify an independent cohort of clinically diagnosed AD dementia patients (N = 242) based on individual FDG-PET profiles.Autopsy-confirmed LATE-NC and AD groups showed markedly distinct temporo-limbic and temporo-parietal FDG-PET patterns, respectively. Clinically diagnosed AD dementia patients showing a LATE-NC-like FDG-PET pattern (N = 25, 10%) were significantly older, showed less abnormal AD biomarker levels, lower APOE ε4, and higher TMEM106B risk allele load. Clinically, they exhibited a more memory-predominant profile and a generally slower disease course.An autopsy-derived temporo-limbic FDG-PET signature identifies older amnestic patients whose clinical, genetic, and molecular biomarker features are consistent with underlying LATE-NC.
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| 20. |
- Hyde, K. D., et al.
(författare)
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Global consortium for the classification of fungi and fungus-like taxa
- 2023
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Ingår i: MYCOSPHERE. - : Mushroom Research Foundation. - 2077-7000 .- 2077-7019. ; 14:1, s. 1960-2012
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Tidskriftsartikel (refereegranskat)abstract
- The Global Consortium for the Classification of Fungi and fungus-like taxa is an international initiative of more than 550 mycologists to develop an electronic structure for the classification of these organisms. The members of the Consortium originate from 55 countries/regions worldwide, from a wide range of disciplines, and include senior, mid-career and early-career mycologists and plant pathologists. The Consortium will publish a biannual update of the Outline of Fungi and fungus-like taxa, to act as an international scheme for other scientists. Notes on all newly published taxa at or above the level of species will be prepared and published online on the Outline of Fungi website (https://www.outlineoffungi.org/), and these will be finally published in the biannual edition of the Outline of Fungi and fungus-like taxa. Comments on recent important taxonomic opinions on controversial topics will be included in the biannual outline. For example, 'to promote a more stable taxonomy in Fusarium given the divergences over its generic delimitation', or 'are there too many genera in the Boletales?' and even more importantly, 'what should be done with the tremendously diverse 'dark fungal taxa?' There are undeniable differences in mycologists' perceptions and opinions regarding species classification as well as the establishment of new species. Given the pluralistic nature of fungal taxonomy and its implications for species concepts and the nature of species, this consortium aims to provide a platform to better refine and stabilise fungal classification, taking into consideration views from different parties. In the future, a confidential voting system will be set up to gauge the opinions of all mycologists in the Consortium on important topics. The results of such surveys will be presented to the International Commission on the Taxonomy of Fungi (ICTF) and the Nomenclature Committee for Fungi (NCF) with opinions and percentages of votes for and against. Criticisms based on scientific evidence with regards to nomenclature, classifications, and taxonomic concepts will be welcomed, and any recommendations on specific taxonomic issues will also be encouraged; however, we will encourage professionally and ethically responsible criticisms of others' work. This biannual ongoing project will provide an outlet for advances in various topics of fungal classification, nomenclature, and taxonomic concepts and lead to a community-agreed classification scheme for the fungi and fungus-like taxa. Interested parties should contact the lead author if they would like to be involved in future outlines.
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