| 1. |
- Hillier, Ladeana W, et al.
(författare)
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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
- 2004
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Ingår i: Nature. - 0028-0836 .- 1476-4687. ; 432:7018, s. 695-716
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Tidskriftsartikel (refereegranskat)abstract
- We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to have its genome sequenced, the draft sequence of its genome--composed of approximately one billion base pairs of sequence and an estimated 20,000-23,000 genes--provides a new perspective on vertebrate genome evolution, while also improving the annotation of mammalian genomes. For example, the evolutionary distance between chicken and human provides high specificity in detecting functional elements, both non-coding and coding. Notably, many conserved non-coding sequences are far from genes and cannot be assigned to defined functional classes. In coding regions the evolutionary dynamics of protein domains and orthologous groups illustrate processes that distinguish the lineages leading to birds and mammals. The distinctive properties of avian microchromosomes, together with the inferred patterns of conserved synteny, provide additional insights into vertebrate chromosome architecture.
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| 2. |
- Hawkes, N. C., et al.
(författare)
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The formation and evolution of extreme shear reversal in JET and its influence on local thermal transport
- 2002
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Ingår i: Plasma Physics and Controlled Fusion. - : IOP Publishing. - 0741-3335 .- 1361-6587. ; 44:7, s. 1105-1125
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Tidskriftsartikel (refereegranskat)abstract
- In JET discharges where lower hybrid heating and current drive (LHCD) is applied early during the current ramp, a region of the plasma with zero current density is formed near the axis. At the boundary of this region the current density is large and B-theta increases rapidly over a small distance. In the central region the safety factor, q, is effectively infinite, but this falls steeply in the boundary region. Outside the boundary region q reaches a minimum, where the magnetic shears equivalent to r/q (dq/dr) becomes zero. The formation of this region of zero current is dependent on both the heating and the current drive effects of the LHCD. When LHCD is switched off the current profile begins to relax towards the resistive peaked current distribution of fully inductive tokamak operation. If LHCD is not used in the current rise then these current profiles are not established. Although the physical mechanism exists to drive the central plasma current below zero, in most cases it appears to be prevented from going negative. At least one MHD mechanism has been identified which could be responsible for this. The presence of the zero central current is closely linked to the periodic relaxation events seen in these discharges. In these discharges, internal transport barriers have been observed with additional heating powers substantially below the values required to obtain barriers in monotonic q profile cases.
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| 3. |
- Högberg, Peter, et al.
(författare)
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Large-scale forest girdling shows that current photosynthesis drives soil respiration
- 2001
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 411:6839, s. 789-792
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Tidskriftsartikel (refereegranskat)abstract
- The respiratory activities of plant roots, of their mycorrhizal fungi and of the free-living microbial heterotrophs (decomposers) in soils are significant components of the global carbon balance, but their relative contributions remain uncertain. To separate mycorrhizal root respiration from heterotrophic respiration in a boreal pine forest, we conducted a large-scale tree-girdling experiment, comprising 9 plots each containing about 120 trees. Tree-girdling involves stripping the stem bark to the depth of the current xylem at breast height terminating the supply of current photosynthates to roots and their mycorrhizal fungi without physically disturbing the delicate root-microbe-soil system. Here we report that girdling reduced soil respiration within 1-2 months by about 54% relative to respiration on ungirdled control plots, and that decreases of up to 37% were detected within 5 days. These values clearly show that the flux of current assimilates to roots is a key driver of soil respiration; they are conservative estimates of root respiration, however, because girdling increased the use of starch reserves in the roots. Our results indicate that models of soil respiration should incorporate measures of photosynthesis and of seasonal patterns of photosynthate allocation to roots.
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| 4. |
- Linder, Astrid, et al.
(författare)
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Dynamic performances of different seat designs for low to medium velocity rear impact.
- 2001
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Ingår i: 45th Annual Proceedings. - : Association for the Advancement of Automotive Medicine. ; , s. 187-201
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Konferensbidrag (refereegranskat)abstract
- There is good evidence that seat design and impact severities in terms of delta-V and acceleration plays a role in AIS 1 neck injury outcomes in the event of a rear impact. This study evaluates a number of current production seats to assess the AIS 1 neck injury protection potential at different impact severities. Five different seat designs were exposed to four different impact severities in a sled simulating a rear impact. The same delta-V produced with different peak accelerations generated very different dummy responses. Head restraint position influenced the angular and horizontal displacement of the head relative to torso and the time of head to head restraint contact. The lowest motion of the head relative to the torso was found in the two anti-whiplash seats tested. The results of the study can be used for the design of future vehicle seats and anti-whiplash systems.
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| 5. |
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| 6. |
- Norkko, Alf, 1967, et al.
(författare)
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Ecological role of Phyllophora antarctica drift accumulations in coastal soft-sediment communities of McMurdo Sound, Antarctica
- 2004
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Ingår i: Polar Biology. - : Springer Science and Business Media LLC. - 0722-4060 .- 1432-2056. ; 27:8, s. 482-494
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Tidskriftsartikel (refereegranskat)abstract
- At Cape Evans on Ross Island, Antarctica, the rhodophyte Phyllophora antarctica is the dominant primary producer in terms of biomass from 10 to >30 m depth. The vast majority of Phyllophora occurs as accumulations of unattached plants. Whilst decomposition and incorporation of macroalgal drift material into the food web is rapid in temperate ecosystems, we predicted these processes to be slow in Antarctica. We address the functional role of macroalgal detritus in fuelling the biodiversity of benthic communities at Cape Evans during the summers of 2001 and 2002. Specifically we (a) describe the distribution and biomass of attached and drift algae, (b) assess the photosynthetic capacity and degradation of drift accumulations using in situ fluorometry, (c) assess the effect of patches of drift Phyllophora on underlying macrofaunal communities, and, (d) use stable isotopes to investigate the possible uptake of Phyllophora by macrofauna. We found drift Phyllophora accumulations throughout the depth range investigated (3-31 m), with peak biomasses of 140+/-30 g dwt m(-2) in the 15-25 m depth strata. At this depth stratum Phyllophora was a conspicuous habitat element with the % cover on the seafloor averaging 30%. While initially the drift algal accumulations appeared in good health we measured significant declines in photosynthetic capacity between years suggesting ongoing, albeit slow, degradation of the drift algal accumulations. Our results demonstrate that Phyllophora drift accumulations have a structuring role on soft-sediment communities, which increases in strength with the gradual degradation of the algae. The longevity of Phyllophora is enhanced by secondary metabolites, which serve as protection against grazers, and their extreme shade adaptation. However, our carbon and nitrogen stable isotope data of polychaetes and amphipods associated with Phyllophora suggest that macroalgal detritus enters the food web, and although this process is slow, Phyllophora accumulations might serve to dampen the seasonality in food supply providing higher trophic levels with a more constant food source.
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| 7. |
- Ongena, J., et al.
(författare)
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Recent progress on JET towards the ITER reference mode of operation at high density
- 2001
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Ingår i: Plasma Physics and Controlled Fusion. - 0741-3335 .- 1361-6587. ; 43, s. A11-A30
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Tidskriftsartikel (refereegranskat)abstract
- Recent progress towards obtaining high density and high confinement in JET as required for the ITER reference scenario at Q = 10 is summarized. Plasmas with simultaneous confinement H-98(y.2) = 1 and densities up to n/n(Gw) similar to 1 are now routinely obtained. This has been possible (i) by using plasmas at high (delta similar to 0.5) and medium (delta similar to 0.3-0.4) triangularity with sufficient heating power to maintain Type I ELMs, (ii) with impurity seeded plasmas at high (delta similar to 0.5) and low (delta less than or equal to 0.2) triangularity, (iii) with an optimized pellet injection sequence, maintaining the energy confinement and raising the density, and (iv) by carefully tuning the gas puff rate leading to plasmas with peaked density profiles and good confinement at long time scales. These high performance discharges exhibit Type I ELMs, with a new and more favourable behaviour observed at high densities, requiring further studies. Techniques for a possible mitigation of these ELMs are discussed, and first promising results are obtained with impurity seeding in discharges at high triangularity. Scaling studies using the new data of this year show a strong dependence of confinement on upper triangularity, density and proximity to the Greenwald limit. Observed MHD instabilities and methods to avoid these in high density and high confinement plasmas are discussed.
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| 8. |
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