| 1. |
- Craddock, Nick, et al.
(författare)
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Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls
- 2010
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 464:7289, s. 713-720
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Tidskriftsartikel (refereegranskat)abstract
- Copy number variants (CNVs) account for a major proportion of human genetic polymorphism and have been predicted to have an important role in genetic susceptibility to common disease. To address this we undertook a large, direct genome-wide study of association between CNVs and eight common human diseases. Using a purpose-designed array we typed,19,000 individuals into distinct copy-number classes at 3,432 polymorphic CNVs, including an estimated similar to 50% of all common CNVs larger than 500 base pairs. We identified several biological artefacts that lead to false-positive associations, including systematic CNV differences between DNAs derived from blood and cell lines. Association testing and follow-up replication analyses confirmed three loci where CNVs were associated with disease-IRGM for Crohn's disease, HLA for Crohn's disease, rheumatoid arthritis and type 1 diabetes, and TSPAN8 for type 2 diabetes-although in each case the locus had previously been identified in single nucleotide polymorphism (SNP)-based studies, reflecting our observation that most common CNVs that are well-typed on our array are well tagged by SNPs and so have been indirectly explored through SNP studies. We conclude that common CNVs that can be typed on existing platforms are unlikely to contribute greatly to the genetic basis of common human diseases.
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| 2. |
- Callaghan, Terry V., et al.
(författare)
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Changing snow cover and its impacts
- 2011
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Ingår i: Snow, Water, Ice and Permafrost in the Arctic (SWIPA). - Oslo : Arctic Monitoring and Assessment Programme. - 9788279710714 ; , s. 4:1-4:58
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Bokkapitel (refereegranskat)
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| 3. |
- Callaghan, Terry V., et al.
(författare)
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Multiple Effects of Changes in Arctic Snow Cover
- 2011
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Ingår i: Ambio: a Journal of Human Environment. - : Springer Science and Business Media LLC. - 0044-7447 .- 1654-7209. ; 40, s. 32-45
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Tidskriftsartikel (refereegranskat)abstract
- Snow cover plays a major role in the climate, hydrological and ecological systems of the Arctic and other regions through its influence on the surface energy balance (e.g. reflectivity), water balance (e.g. water storage and release), thermal regimes (e.g. insulation), vegetation and trace gas fluxes. Feedbacks to the climate system have global consequences. The livelihoods and well-being of Arctic residents and many services for the wider population depend on snow conditions so changes have important consequences. Already, changing snow conditions, particularly reduced summer soil moisture, winter thaw events and rain-on-snow conditions have negatively affected commercial forestry, reindeer herding, some wild animal populations and vegetation. Reductions in snow cover are also adversely impacting indigenous peoples' access to traditional foods with negative impacts on human health and well-being. However, there are likely to be some benefits from a changing Arctic snow regime such as more even run-off from melting snow that favours hydropower operations.
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| 4. |
- Walker, Donald A., et al.
(författare)
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Cumulative Effects of Rapid Land-Cover and Land-Use Changes on the Yamal Peninsula, Russia
- 2011
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Ingår i: Eurasian Arctic Land Cover and Land Use in a Changing Climate. - New York : Springer Netherlands. - 9789048191178 - 9789048191185 ; , s. 207-236
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Bokkapitel (övrigt vetenskapligt/konstnärligt)abstract
- The Yamal Peninsula in northwest Siberia is undergoing some of the most rapid land-cover and land-use changes in the Arctic due to a combination of gas development, reindeer herding, and climate change. Unusual geological conditions (nutrient-poor sands, massive ground ice and extensive landslides) exacerbate the impacts. These changes will likely increase markedly as transportation corridors are built to transport the gas to market. Understanding the nature, extent, causes and consequences (i.e., the cumulative effects) of the past and ongoing rapid changes on the Yamal is important for effective, long-term decision-making and planning. The cumulative effects to vegetation are the focus of this chapter because the plants are a critical component of the Yamal landscape that support the indigenous Nenets people and their reindeer and also protect the underlying ice-rich permafrost from melting. We are using a combination of ground-based studies (a transect of live locations across the Yamal), remote-sensing studies, and analyses of Nenets land-use activities to develop vegetation-change models that can be used to help anticipate future states of the tundra and how those changes might affect traditional reindeer herding practices and the thermal state of the permafrost. This chapter provides an overview of the approach, some early results, and recommendations for expanding the concept of cumulative-effects analysis to include examining the simultaneous and interactive effects of multiple drivers of change.
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| 5. |
- Bernes, Claes, et al.
(författare)
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What are the impacts of reindeer/caribou (Rangifer tarandus L.) on arctic and alpine vegetation? : A systematic review protocol
- 2013
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Ingår i: Environmental Evidence. - : BioMed Central (BMC). - 2047-2382. ; 2
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Tidskriftsartikel (refereegranskat)abstract
- Background: Reindeer and caribou (both belonging to the species Rangifer tarandus L.) are among the most important large herbivores in Eurasia’s and North America’s arctic, alpine and boreal zones. In Sweden, the impact of reindeer grazing on arctic and alpine vegetation has recently been re-evaluated. In the 1990s, records of grazing-related vegetation degradation helped to form a widespread perception that some mountain areas were overgrazed. However, later analyses have shown no evidence of large-scale overutilisation of reindeer ranges in the Swedish mountains.The present-day consensus is that overgrazing has been temporary and local, and that it rarely has caused permanent damage, but it is imperative to examine the scientific support for these views. Moreover, the Swedish Parliament has adopted an environmental quality objective according to which it is essential to preserve ‘a mountain landscape characterised by grazing’. No details have been given on how this goal is to be interpreted, which is another reason why the significance of reindeer grazing for arctic/alpine vegetation needs to be assessed.This protocol presents the methodology that will be used in a systematic review of the impact of reindeer herbivory in arctic and alpine ecosystems. The focus will be on Fennoscandia, but data from other parts of the range of R. tarandus will be used when deemed appropriate.Methods: The review will be based on primary field studies that compare vegetation subject to different degrees of reindeer/caribou herbivory (including grazing and browsing as well as trampling). Such comparisons can be either temporal, spatial or both. The review will cover impacts of herbivory in arctic, subarctic, alpine and subalpine areas (including the forest-tundra ecotone) across the range of R. tarandus, but not in boreal forests. Relevant aspects of vegetation include cover (abundance), biomass, diversity (e.g. species richness), structure, composition (including functional groups) and productivity.
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| 6. |
- Cornell, Sarah, et al.
(författare)
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Thresholds in the Arctic
- 2013
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Ingår i: Arctic Resilience Interim Report 2013.. - Stockholm : Stockholm Environment Institute and Stockholm Resilience Centre. - 9789186125424 ; , s. 37-69
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Bokkapitel (refereegranskat)
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| 7. |
- Kumpula, Timo, et al.
(författare)
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Land use and land cover change in Arctic Russia : Ecological and social implications of industrial development
- 2011
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Ingår i: Global Environmental Change. - Oxford : Elsevier. - 0959-3780 .- 1872-9495. ; 21:2, s. 550-562
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Tidskriftsartikel (refereegranskat)abstract
- Sizable areas in northwestern arctic Russia have undergone fundamental change in recent decades as the exploration of vast hydrocarbon deposits has intensified. We undertook two case studies on the influence of oil and gas activities within neighbouring federal districts in the tundra zone. Employing a strongly interdisciplinary approach, we studied the ecological, spatial and social dimensions of the visible and perceived changes in land use and land cover. Our data are derived from field sampling, remote sensing and intensive participant observation with indigenous Nenets reindeer herders and non-indigenous workers. Important trends include the rapid expansion of infrastructure, a large influx of workers who compete for freshwater fish, and extensive transformation from shrub- to grass- and sedge-dominated tundra. The latter represents an alternative ecosystem state that is likely to persist indefinitely. On terrain disturbed by off-road vehicle traffic, reindeer pastures' vegetation regenerates with fewer species among which grasses and sedges dominate, thus reducing biodiversity. To have maximum forage value such pastures must be accessible and free of trash, petro-chemicals and feral dogs. We found that a wide range of direct and indirect impacts, both ecological and social, accumulate in space and time such that the combined influence is effectively regional rather than local, depending in part on the placement of facilities. While incoming workers commonly commit poaching, they also serve as exchange partners, making barter for goods possible in remote locations. In general, the same positive and negative impacts of the presence of industry were mentioned in each study region. Even using very high-resolution remote sensing data (Quickbird-2) it is not possible to determine fully the amount of degraded territory in modern oil and gas fields. With regard to policy, both biophysical and social impacts could be substantially reduced if information flow between herders and workers were to be optimized. (C) 2011 Elsevier Ltd. All rights reserved.
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