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- Adler, Ruth E., et al.
(författare)
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Sediment record from the western Arctic Ocean with an improved Late Quaternary age resolution : HOTRAX core HLY0503-8JPC, Mendeleev Ridge
- 2009
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Ingår i: Global and Planetary Change. - : Elsevier BV. - 0921-8181 .- 1872-6364. ; 68:02-jan, s. 18-29
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Tidskriftsartikel (refereegranskat)abstract
- Sediment core HLY0503-8JPC raised by the HOTRAX'05 expedition from the Mendeleev Ridge was analyzed for multiple lithological, paleontological. and stable-isotopic proxies to reconstruct paleoceanographic conditions in the western Arctic Ocean during the Late Quaternary. The core, extensively sampled in the upper 5 m, reveals pronounced changes in sedimentary environments during the ca. 250 kyr interval encompassing Marine Isotopic Stages (MIS) 1 to 7. An estimated average resolution of 500 yr/sample, at least for the last glacial cycle including the last interglacial, provides more detail than seen in other sedimentary records from the western Arctic Ocean. The age control is provided by C-14 and amino acid racemization measurements on planktonic foraminifers and correlations with the stratigraphy developed for the central Lomonosov Ridge and with glacial events at the Eurasian Arctic margin. Cyclic variations in lithology combined with foraminiferal abundance and stable-isotopic composition indicate profound changes in hydrographic and depositional environments between interglacial-type and glacial-type periods apparently reflecting a combination of 100-kyr and precessional time scales. This periodicity is complicated by abrupt iceberg- and/or meltwater-discharge events with variable (Laurentide vs. Eurasian) provenance. The proxy record from the interval identified as the last interglacial (MIS 5e), which may aid in understanding the future state of the Arctic Ocean, indicates low ice conditions and possibly enhanced stratification of the water column.
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- Darby, Dennis, et al.
(författare)
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The role of currents and sea ice in both slowly deposited central Arctic and rapidly deposited Chukchi-Alaskan margin sediments
- 2009
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Ingår i: Global and Planetary Change. - : Elsevier BV. - 0921-8181 .- 1872-6364. ; 68:1-2, s. 58-72
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Tidskriftsartikel (refereegranskat)abstract
- A study of three long cores from the outer shelf and continental slope north of Alaska in the Arctic Ocean indicate that localized drift deposits occur here with sedimentation rates of more than 1.5 m/kyr during the Holocene. Currents in this area average about 5–20 cm/s but can reach 100 cm/s and these velocities transport the sediment found in these cores primarily as intermittent suspended load. These high accumulation sediments form levee-like deposits associated with margins of canyons cutting across the shelf and slope. Unlike most textural investigations of Arctic sediment that focus on the coarser ice-rafted detritus (IRD), this paper focuses on the > 95% of the sediment, which is finer than 45 μm. The mean size of this fraction varies between 6 and 15 μm in Holocene sediments from the Chukchi–Alaskan shelf and slope with the higher values closer to shore. Analysis of detailed size distributions of these Holocene deposits are compared to 34 sediment samples collected from sea ice across the Arctic Ocean and to Holocene sediment from central Arctic Ocean cores and indicate that similar textural parameters occur in all of these sediments. Principal components of these size distributions indicate that sea ice is an important link between the shelves and the central Arctic. Factor scores indicate nearly identical components in the clay and fine silt size fractions but very different components in the coarse silt for sea ice sediment and central Arctic ridge sediments compared to shelf and continental slope deposits. Sea ice must contribute to sedimentation in both of these Arctic regions, but bottom currents dominate in the slope region, forming drift deposits.
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- Ma, Li-Jun, et al.
(författare)
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Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication.
- 2009
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Ingår i: PLoS genetics. - : Public Library of Science (PLoS). - 1553-7404. ; 5:7, s. e1000549-
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Tidskriftsartikel (refereegranskat)abstract
- Rhizopus oryzae is the primary cause of mucormycosis, an emerging, life-threatening infection characterized by rapid angioinvasive growth with an overall mortality rate that exceeds 50%. As a representative of the paraphyletic basal group of the fungal kingdom called "zygomycetes," R. oryzae is also used as a model to study fungal evolution. Here we report the genome sequence of R. oryzae strain 99-880, isolated from a fatal case of mucormycosis. The highly repetitive 45.3 Mb genome assembly contains abundant transposable elements (TEs), comprising approximately 20% of the genome. We predicted 13,895 protein-coding genes not overlapping TEs, many of which are paralogous gene pairs. The order and genomic arrangement of the duplicated gene pairs and their common phylogenetic origin provide evidence for an ancestral whole-genome duplication (WGD) event. The WGD resulted in the duplication of nearly all subunits of the protein complexes associated with respiratory electron transport chains, the V-ATPase, and the ubiquitin-proteasome systems. The WGD, together with recent gene duplications, resulted in the expansion of multiple gene families related to cell growth and signal transduction, as well as secreted aspartic protease and subtilase protein families, which are known fungal virulence factors. The duplication of the ergosterol biosynthetic pathway, especially the major azole target, lanosterol 14alpha-demethylase (ERG11), could contribute to the variable responses of R. oryzae to different azole drugs, including voriconazole and posaconazole. Expanded families of cell-wall synthesis enzymes, essential for fungal cell integrity but absent in mammalian hosts, reveal potential targets for novel and R. oryzae-specific diagnostic and therapeutic treatments.
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- Ortiz, Carlos, 1976-
(författare)
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First Principles Calculations of Electron Transport and Structural Damage by Intense Irradiation
- 2009
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Doktorsavhandling (övrigt vetenskapligt/konstnärligt)abstract
- First principle electronic structure theory is used to describe the effect of crystal binding on radiation detectors, electron transport properties, and structural damage induced by intense irradiation. A large database containing general electronic structure results to which data mining algorithms can be applied in the search for new functional materials, a case study is presented for scintillator detector materials. Inelastic cross sections for the generation of secondary electron cascades through impact ionization are derived from the dielectric response of an electron gas and evolved in time with Molecular Dynamics (MD). Qualitative and quantitive estimates are presented for the excitation and relaxation of a sample irradiated with Free Electron Laser pulses. A study is presented in where the structural damage on covalent bonded crystals following intense irradiation is derived from a Tight Binding approach and evolved in time with MD in where the evolution of the sample is derived from GW theory for the quasiparticle spectra and a dedicated Boltzmann transport equation for the impact ionization.
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