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| 2. |
- Amirahmadi, Ali, 1994-, et al.
(författare)
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A Masked Language Model for Multi-Source EHR Trajectories Contextual Representation Learning
- 2023
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Ingår i: Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023. - Amsterdam : IOS Press. - 0926-9630 .- 1879-8365. - 9781643683881 ; 302, s. 609-610, s. 609-610
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Konferensbidrag (refereegranskat)abstract
- Using electronic health records data and machine learning to guide future decisions needs to address challenges, including 1) long/short-term dependencies and 2) interactions between diseases and interventions. Bidirectional transformers have effectively addressed the first challenge. Here we tackled the latter challenge by masking one source (e.g., ICD10 codes) and training the transformer to predict it using other sources (e.g., ATC codes).
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| 3. |
- Axberg Pålsson, Sandra, et al.
(författare)
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Single-Stranded Oligonucleotide-Mediated Inhibition of Respiratory Syncytial Virus Infection
- 2020
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Ingår i: Frontiers in Immunology. - : Frontiers Media SA. - 1664-3224. ; 11
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Tidskriftsartikel (refereegranskat)abstract
- Respiratory syncytial virus (RSV) is the leading cause of acute lower respiratory tract infections in young children. Currently, there is no RSV vaccine or universally accessible antiviral treatment available. Addressing the urgent need for new antiviral agents, we have investigated the capacity of a non-coding single-stranded oligonucleotide (ssON) to inhibit RSV infection. By utilizing a GFP-expressing RSV, we demonstrate that the ssON significantly reduced the proportion of RSV infected A549 cells (lung epithelial cells). Furthermore, we show that ssON's antiviral activity was length dependent and that both RNA and DNA of this class of oligonucleotides have antiviral activity. We reveal that ssON inhibited RSV infection by competing with the virus for binding to the cellular receptor nucleolin in vitro. Additionally, using a recombinant RSV that expresses luciferase we show that ssON effectively blocked RSV infection in mice. Treatment with ssON in vivo resulted in the upregulation of RSV-induced interferon stimulated genes (ISGs) such as Stat1, Stat2, Cxcl10, and Ccl2. This study highlights the possibility of using oligonucleotides as therapeutic agents against RSV infection. We demonstrate that the mechanism of action of ssON is the inhibition of viral entry in vitro, likely through the binding of the receptor, nucleolin and that ssON treatment against RSV infection in vivo additionally results in the upregulation of ISGs.
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| 4. |
- Delley, Diane, et al.
(författare)
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ASTER: Developing a Platform to Achieve Microgravity for Low-Cost Experiments
- 2021
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Ingår i: IAC 2021 Congress Proceedings, 72nd International Astronautical Congress (IAC), Dubai, United Arab Emirates. - : International Astronautical Federation, IAF.
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Konferensbidrag (refereegranskat)abstract
- Microgravity is an important field of research, which is vital for the efficient future utilisation of space. It is possible to undertake microgravity experiments on-orbit, however, this is often well outside the available funding range of low-cost experiments. Microgravity experiments undertaken on sounding rockets are more accessible to low-budget institutions and students, and provide longer periods of sustained microgravity than drop towers and parabolic flights. However, unless stabilised, such experiments cannot achieve true microgravity conditions due to residual external forces, such as the centrifugal force of the rocket’s spin, acting on the experiment. Thus, projects that want to carry out experiments in microgravity conditions would first need to design the platform required to achieve true microgravity, making these projects more complex and time intensive.Project ASTER (Attitude STabilised free falling ExpeRiment) is designing and testing such a platform for microgravity research. ASTER is taking advantage of the extended microgravity period of a sounding rocket flight to test a high performance, low-cost Attitude Control System (ACS) solution capable of providing microgravity conditions for experiments. This would greatly benefit both future satellite projects and sounding rocket experiments which require highly accurate stabilisation and pointing capabilities. The design utilises three reaction wheels controlled by a closed loop system to stabilise a Free Falling Unit - ejected from a sounding rocket - within seconds. The platform will be able to perform slewing manoeuvres and accommodate future experiments on easily adaptable mounting points which allow for on-board sensors and cameras. ASTER will be launched on-board REXUS 30 in March 2022, after which it will be recovered and the obtained results will be published on an open source basis to ensure its future availability to student and other low budget research projects, thereby allowing further improvement, optimisation, and customisation. ASTER is aiming to establish a platform which simplifies the development of microgravity experiments, especially for student projects which often face tight schedules and limited resources. ASTER is being developed as part of the 13th Cycle of the German-Swedish student programme REXUS/BEXUS by students of Luleå University of Technology (LTU) at the Kiruna Space Campus.
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| 5. |
- Henry, Greg H.R., et al.
(författare)
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The International Tundra Experiment (ITEX): 30 years of research on tundra ecosystems
- 2022
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Ingår i: Arctic Science. - : Canadian Science Publishing. - 2368-7460. ; 8:3, s. 550-571
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Tidskriftsartikel (refereegranskat)abstract
- The International Tundra Experiment (ITEX) was founded in 1990 as a network of scientists studying responses of tundra ecosystems to ambient and experimental climate change at Arctic and alpine sites across the globe. Common measurement and experimental design protocols have facilitated synthesis of results across sites to gain biome-wide insights of climate change impacts on tundra. This special issue presents results from more than 30 years of ITEX research. The importance of snow regimes, bryophytes, and herbivory are highlighted, with new protocols and studies proposed. The increasing frequency and magnitude of extreme climate events is shown to have strong effects on plant reproduction. The most consistent plant trait response across sites is an increase in vegetation height, especially for shrubs. This will affect surface energy balance, carbon and nutrient dynamics and trophic level interactions. Common garden studies show adaptation responses in tundra species to climate change but they are species and regionally specific. Recommendations are made including establishing sites near northern communities to increase reciprocal engagement with local knowledge holders and establishing multi-factor experiments. The success of ITEX is based on collegial cooperation among researchers and the network remains focused on documenting and understanding impacts of environmental change on tundra ecosystems.
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| 6. |
- Hollister, R. D., et al.
(författare)
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A review of open top chamber (OTC) performance across the ITEX Network
- 2023
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Ingår i: Arctic Science. - : Canadian Science Publishing. - 2368-7460. ; 9:2, s. 331-344
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Tidskriftsartikel (refereegranskat)abstract
- Open top chambers (OTCs) were adopted as the recommended warming mechanism by the International Tundra Experiment network in the early 1990s. Since then, OTCs have been deployed across the globe. Hundreds of papers have reported the im-pacts of OTCs on the abiotic environment and the biota. Here, we review the impacts of the OTC on the physical environment, with comments on the appropriateness of using OTCs to characterize the response of biota to warming. The purpose of this review is to guide readers to previously published work and to provide recommendations for continued use of OTCs to under -stand the implications of warming on low stature ecosystems. In short, the OTC is a useful tool to experimentally manipulate temperature; however, the characteristics and magnitude of warming varies greatly in different environments; therefore, it is important to document chamber performance to maximize the interpretation of biotic response. When coupled with long-term monitoring, warming experiments are a valuable means to understand the impacts of climate change on natural ecosystems.
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| 7. |
- Itkonen, Suvi T., et al.
(författare)
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Vitamin D status and current policies to achieve adequate vitamin D intake in the Nordic countries
- 2021
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Ingår i: Scandinavian Journal of Public Health. - : Sage Publications. - 1403-4948 .- 1651-1905. ; 49:6, s. 616-627
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Forskningsöversikt (refereegranskat)abstract
- Aims: Nordic countries share fairly similar food culture and geographical location as well as common nutrition recommendations. The aim of this paper was to review the latest data on vitamin D status and intake and to describe the national supplementation and food fortification policies to achieve adequate vitamin D intake in the Nordic countries. Methods: The data are based on results derived from a literature search presented in a workshop held in Helsinki in November 2018 and completed by recent studies. Results: Vitamin D policies and the implementation of the recommendations differ among the Nordic countries. Vitamin D fortification policies can be mandatory or voluntary and widespread, moderate or non-existent. Vitamin D supplementation recommendations differ, ranging from all age groups being advised to take supplements to only infants. In the general adult population of the Nordic countries, vitamin D status and intake are better than in the risk groups that are not consuming vitamin D supplements or foods containing vitamin D. Non-Western immigrant populations in all Nordic countries share the problem of vitamin D insufficiency and deficiency. Conclusions: Despite the common nutrition recommendations, there are differences between the Nordic countries in the implementation of the recommendations and policies to achieve adequate vitamin D intake and status. There is a need for wider Nordic collaboration studies as well as strategies to improve vitamin D status, especially in risk groups.
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| 8. |
- Kenny, Gavin G., et al.
(författare)
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A Late Paleocene age for Greenland’s Hiawatha impact structure
- 2022
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Ingår i: Science Advances. - : American Association for the Advancement of Science (AAAS). - 2375-2548. ; 8:10
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Tidskriftsartikel (refereegranskat)abstract
- The ~31-km-wide Hiawatha structure, located beneath Hiawatha Glacier in northwestern Greenland, has been proposed as an impact structure that may have formed after the Pleistocene inception of the Greenland Ice Sheet. To date the structure, we conducted 40Ar/39Ar analyses on glaciofluvial sand and U-Pb analyses on zircon separated from glaciofluvial pebbles of impact melt rock, all sampled immediately downstream of Hiawatha Glacier. Unshocked zircon in the impact melt rocks dates to ~1915 million years (Ma), consistent with felsic intrusions found in local bedrock. The 40Ar/39Ar data indicate Late Paleocene resetting and shocked zircon dates to 57.99 ± 0.54 Ma, which we interpret as the impact age. Consequently, the Hiawatha impact structure far predates Pleistocene glaciation and is unrelated to either the Paleocene-Eocene Thermal Maximum or flood basalt volcanism in east Greenland. However, it was contemporaneous with the Paleocene Carbon Isotope Maximum, although the impact’s exact paleoenvironmental and climatic significance awaits further investigation.
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| 9. |
- Kjær, Kurt H., et al.
(författare)
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Glacier response to the Little Ice Age during the Neoglacial cooling in Greenland
- 2022
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Ingår i: Earth-Science Reviews. - : Elsevier. - 0012-8252 .- 1872-6828. ; 227
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Tidskriftsartikel (refereegranskat)abstract
- In the Northern Hemisphere, an insolation driven Early to Middle Holocene Thermal Maximum was followed by a Neoglacial cooling that culminated during the Little Ice Age (LIA). Here, we review the glacier response to this Neoglacial cooling in Greenland. Changes in the ice margins of outlet glaciers from the Greenland Ice Sheet as well as local glaciers and ice caps are synthesized Greenland-wide. In addition, we compare temperature reconstructions from ice cores, elevation changes of the ice sheet across Greenland and oceanographic reconstructions from marine sediment cores over the past 5,000 years. The data are derived from a comprehensive review of the literature supplemented with unpublished reports. Our review provides a synthesis of the sensitivity of the Greenland ice margins and their variability, which is critical to understanding how Neoglacial glacier activity was interrupted by the current anthropogenic warming. We have reconstructed three distinct periods of glacier expansion from our compilation: two older Neoglacial advances at 2,500 – 1,700 yrs. BP (Before Present = 1950 CE, Common Era) and 1,250 – 950 yrs. BP; followed by a general advance during the younger Neoglacial between 700-50 yrs. BP, which represents the LIA. There is still insufficient data to outline the detailed spatio-temporal relationships between these periods of glacier expansion. Many glaciers advanced early in the Neoglacial and persisted in close proximity to their present-day position until the end of the LIA. Thus, the LIA response to Northern Hemisphere cooling must be seen within the wider context of the entire Neoglacial period of the past 5,000 years. Ice expansion appears to be closely linked to changes in ice sheet elevation, accumulation, and temperature as well as surface-water cooling in the surrounding oceans. At least for the two youngest Neoglacial advances, volcanic forcing triggering a sea-ice /ocean feedback, could explain their initiation. There are probably several LIA glacier fluctuations since the first culmination close to 1250 CE (Common Era) and available data suggests ice culminations in the 1400s, early to mid-1700s and early to mid-1800s CE. The last LIA maxima lasted until the present deglaciation commenced around 50 yrs. BP (1900 CE). The constraints provided here on the timing and magnitude of LIA glacier fluctuations delivers a more realistic background validation for modelling future ice sheet stability.
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| 10. |
- Prevéy, Janet S., et al.
(författare)
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The tundra phenology database: more than two decades of tundra phenology responses to climate change
- 2022
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Ingår i: Arctic Science. - : Canadian Science Publishing. - 2368-7460. ; 8:3, s. 1026-1039
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Tidskriftsartikel (refereegranskat)abstract
- Observations of changes in phenology have provided some of the strongest signals of the effects of climate change on terrestrial ecosystems. The International Tundra Experiment (ITEX), initiated in the early 1990s, established a common protocol to measure plant phenology in tundra study areas across the globe. Today, this valuable collec-tion of phenology measurements depicts the responses of plants at the colder extremes of our planet to experimental and ambient changes in temperature over the past decades. The database contains 150 434 phenology observations of 278 plant species taken at 28 study areas for periods of 1–26 years. Here we describe the full data set to increase the visibility and use of these data in global analyses and to invite phenology data contributions from underrepresented tundra locations. Portions of this tundra phenology database have been used in three recent syntheses, some data sets are expanded, others are from entirely new study areas, and the entirety of these data are now available at the Polar Data Catalogue (https://doi.org/10.21963/13215).
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