| 1. |
- Chen, Baowei, et al.
(författare)
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Methylation of inorganic mercury by methylcobalamin in aquatic systems
- 2007
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Ingår i: Applied organometallic chemistry. - : John Wiley & Sons. - 0268-2605 .- 1099-0739. ; 21:6, s. 462-467
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Tidskriftsartikel (refereegranskat)abstract
- The methylation of inorganic Hg(II) by methylcobalamin in aquatic systems was studied using high-performance liquid chromatography coupled with UV-digestion cold vapor atomic fluorescence spectrometry (HPLC-UV-CV AFS). Monomethylmercury (MMC) could be positively identified as the reaction product in the aqueous solution. The salinity and pH of the aquatic system have great effects on the formation of MMC, because they could change the species of the reactants in the solution. From an electrophile reaction point of view, salinity and pH alter the electron density of the methyl donor and the electrophilicity of metal ion in the reaction system. This methylation of inorganic Hg(II) is shown to be possible even in highly saline solutions, which indicates its importance in aquatic environments. Kinetic experiments showed that the methylation reaction was fast and first-order for Hg(II). The first-order reaction rate was determined to be 0.00612 and 0.000287 min-1 for pH 5.0 and 1.5, respectively. It is suggested that this methylation could occur in the absence of enzymes, in which Hg(II) acts as an electrophile to attack methylcobalamin with a subsequent transfer of carbanion methyl group to the higher oxidized state of Hg(II).
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| 2. |
- Gao, Feng, et al.
(författare)
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Visible-light photocatalytic properties of weak magnetic BiFeO3 nanoparticles
- 2007
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Ingår i: Advanced Materials. - : Wiley-VCH Verlag. - 0935-9648 .- 1521-4095. ; 19:19, s. 2889-2892
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Tidskriftsartikel (refereegranskat)abstract
- Polycrystalline BiFeO3 nanoparticles (size 80-120 nm) are prepared by a simple sol-gel technique. Such nanoparticles are very efficient for photocatalytic decomposition of organic contaminants under irradiation from ultraviolet to visible frequencies. The BiFeO3 nanoparticles also demonstrate weak ferromagnetism of about 0.06 mu(B)/Fe at room temperature, in good agreement with theoretical calculations.
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| 3. |
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| 4. |
- Hu, Z, et al.
(författare)
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Outbreaks of hemotrophic mycoplasma infections in China
- 2009
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Ingår i: Emerging infectious diseases. - : Centers for Disease Control and Prevention (CDC). - 1080-6059 .- 1080-6040. ; 15:7, s. 1139-1140
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
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| 5. |
- Klionsky, Daniel J., et al.
(författare)
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Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes
- 2008
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Ingår i: Autophagy. - : Landes Bioscience. - 1554-8627 .- 1554-8635. ; 4:2, s. 151-175
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Forskningsöversikt (refereegranskat)abstract
- Research in autophagy continues to accelerate,1 and as a result many new scientists are entering the field. Accordingly, it is important to establish a standard set of criteria for monitoring macroautophagy in different organisms. Recent reviews have described the range of assays that have been used for this purpose.2,3 There are many useful and convenient methods that can be used to monitor macroautophagy in yeast, but relatively few in other model systems, and there is much confusion regarding acceptable methods to measure macroautophagy in higher eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers of autophagosomes versus those that measure flux through the autophagy pathway; thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from fully functional autophagy that includes delivery to, and degradation within, lysosomes (in most higher eukaryotes) or the vacuole (in plants and fungi). Here, we present a set of guidelines for the selection and interpretation of the methods that can be used by investigators who are attempting to examine macroautophagy and related processes, as well as by reviewers who need to provide realistic and reasonable critiques of papers that investigate these processes. This set of guidelines is not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to verify an autophagic response.
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| 6. |
- Liu, Wing Kam, et al.
(författare)
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Complexity science of multiscale materials via stochastic computations
- 2009
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Ingår i: International Journal for Numerical Methods in Engineering. - : Wiley. - 0029-5981 .- 1097-0207. ; 80:6-7, s. 932-978
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Tidskriftsartikel (refereegranskat)abstract
- New technological advances today allow for a range of advanced composite materials, including multilayer materials and nanofiber-matrix composites. In this context, the key to developing advanced materials IS file understanding of the interplay between the various physical scales present. from the atomic level Interactions to the microstructaral composition and the marcoscale behavior Using the developing 'multiresolution data sets mechanics' the 'predictive science-based governing laws of the materials microstructure evolutions' are derived and Melted into a 'stochastic multiresolution design framework' Under such a framework. the governing laws Of the materials microstructure evolution will be essential to assess, across multiple scales. The impact of multiscale material design. geometry design of a structure and the manufacturing process conditions, by following the cause-effect relationship from structure property and then to performance The future Integrated multiscale analysis system will be Constructed based on a probabilistic complexity science-based mathematical framework. its verification, validation and uncertainty quantification tire done through carefully designed experiments, and file life-cycled materials design for products design and manufacturing is performed through the use of petascale computing. The various techniques of microstructure reconstruction result in the genetation of model microstructures that, at some level, has the same statistical properties as the real heterogenous media. Having reconstructed the heterogeneous medium. one can then evaluate Its effective properties via direct numerical simulation and compare these values with experimentally measured properties of the actual medium. The proposed analysis will be dynamic in nature to capture the multi-stage historical evolvement of material/structure performance over the life span of a product. In addition to providing more accurate assessment of structure performance with stochastic multiscale analysis. our development will provide the capability of predicting failures and system reliability to enable more reliable design and decisions in product development.
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| 7. |
- Martin, Francis, et al.
(författare)
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The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis
- 2008
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 452:7183, s. 7-88
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Tidskriftsartikel (refereegranskat)abstract
- Mycorrhizal symbioses -- the union of roots and soil fungi -- are universal in terrestrial ecosystems and may have been fundamental to land colonization by plants1,2. Boreal, temperate, and montane forests all depend upon ectomycorrhizae1. Identification of the primary factors that regulate symbiotic development and metabolic activity will therefore open the door to understanding the role of 2 ectomycorrhizae in plant development and physiology, allowing the full ecological significance of this symbiosis to be explored. Here, we report the genome sequence of the ectomycorrhizal basidiomycete Laccaria bicolor (Fig. 1) and highlight gene sets involved in rhizosphere colonization and symbiosis. This 65-million-base genome assembly contains ~ 20,000 predicted protein-encoding genes and a very large number of transposons and repeated sequences. We detected unexpected genomic features most notably a battery of effector-type small secreted proteins (SSP) with unknown function, several of which are only expressed in symbiotic tissues. The most highly expressed SSP accumulates in the proliferating hyphae colonizing the host root. The ectomycorrhizae-specific proteins likely play a decisive role in the establishment of the symbiosis. The unexpected observation that the genome of L. bicolor lacks carbohydrate-active enzymes involved in degradation of plant cell walls, but maintains the ability to degrade non-plant cell walls, reveals the dual saprotrophic and biotrophic lifestyle of the mycorrhizal fungus which enables it to grow within both soil and living plant roots. The predicted gene inventory of the L. bicolor genome, therefore, points to previously unknown mechanisms of symbiosis operating in biotrophic mycorrhizal fungi. The availability of this genome provides an unparalleled opportunity to develop a deeper understanding of the processes by which symbionts interact with plants within their ecosystem in order to perform vital functions in the carbon and nitrogen cycles that are fundamental to sustainable plant productivity.
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| 8. |
- Orrú, Valeria, et al.
(författare)
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A loss-of-function variant of PTPN22 is associated with reduced risk of systemic lupus erythematosus
- 2009
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Ingår i: Human Molecular Genetics. - : Oxford University Press (OUP). - 0964-6906 .- 1460-2083. ; 18:3, s. 569-579
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Tidskriftsartikel (refereegranskat)abstract
- A gain-of-function R620W polymorphism in the PTPN22 gene, encoding the lymphoid tyrosine phosphatase LYP, has recently emerged as an important risk factor for human autoimmunity. Here we report that another missense substitution (R263Q) within the catalytic domain of LYP leads to reduced phosphatase activity. High-resolution structural analysis revealed the molecular basis for this loss of function. Furthermore, the Q263 variant conferred protection against human systemic lupus erythematosus, reinforcing the proposal that inhibition of LYP activity could be beneficial in human autoimmunity.
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| 9. |
- Rabouille, C., et al.
(författare)
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Comparison of hypoxia among four river-dominated ocean margins: The Changjiang (Yangtze), Mississippi, Pearl, and Rhone rivers
- 2008
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Ingår i: Continental Shelf Research. - : Elsevier BV. - 0278-4343. ; 28:12, s. 1527-1537
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Tidskriftsartikel (refereegranskat)abstract
- We examined the occurrence of seasonal hypoxia (O-2 < 2 mg l(-1)) in the bottom waters of four river-dominated ocean margins (off the Changjiang, Mississippi, Pearl and Rhone Rivers) and compared the processes leading to the depletion of oxygen. Consumption of oxygen in bottom waters is linked to biological oxygen demand fueled by organic matter from primary production in the nutrient-rich river plume and perhaps terrigenous inputs. Hypoxia occurs when this consumption exceeds replenishment by diffusion, turbulent mixing or lateral advection of oxygenated water. The margins off the Mississippi and Changjiang are affected the most by summer hypoxia, while the margins off the Rhone and the Pearl rivers systems are less affected, although nutrient concentrations in the river water are very similar in the four systems. Spring and summer primary production is high overall for the shelves adjacent to the Mississippi, Changjiang and Pearl (1-10g C m(-2) d(-1)), and lower off the Rhone River (< 1 g C m(-2) d(-1)), which could be one of the reasons of the absence of hypoxia on the Rhone shelf The residence time of the bottom water is also related to the occurrence of hypoxia, with the Mississippi margin showing a long residence time and frequent occurrences of hypoxia during summer over very large spatial scales, whereas the East China Sea (ECS)/Changjiang displays hypoxia less regularly due to a shorter residence time of the bottom water. Physical stratification plays an important role with both the Changjiang and Mississippi shelf showing strong thermohaline stratification during summer over extended periods of time, whereas summer stratification is less prominent for the Pearl and Rhone partly due to the wind effect on mixing. The shape of the shelf is the last important factor since hypoxia occurs at intermediate depths (between 5 and 50 m) on broad shelves (Gulf of Mexico and ECS). Shallow estuaries with low residence time such as the Pearl River estuary during the summer wet season when mixing and flushing are dominant features, or deeper shelves, such as the Gulf of Lion off the Rhone show little or no hypoxia. (c) 2008 Elsevier Ltd. All rights reserved.
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| 10. |
- Raeissi, Bahman, 1979, et al.
(författare)
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Electron traps at HfO2/SiOx interfaces
- 2008
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Ingår i: Proceeding of 38th European Solid-State Device Research Conference (ESSDERC 2008), Edinburgh, Scotland, UK. - 1930-8876. - 9781424423637 ; , s. 130-133
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Konferensbidrag (refereegranskat)abstract
- Electron traps in HfO2 have been investigated by measuring thermally stimulated current (TSC). Two different interface regions have been identified where captured electrons interact with energy band states. The two domains are separated by and close to the “interlayer” of SiOx commonly present in high-k/silicon stacks. On the inner side, between SiOx and silicon, we find an irregular silicon crystal which we interpret as a source for interface states. At the SiOx/HfO2 interface, we find a high concentration of unstable traps with a strong influence on the electric field distribution in the gate stack.
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