| 1. |
- Clark, Andrew G., et al.
(författare)
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Evolution of genes and genomes on the Drosophila phylogeny
- 2007
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 450:7167, s. 203-218
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Tidskriftsartikel (refereegranskat)abstract
- Comparative analysis of multiple genomes in a phylogenetic framework dramatically improves the precision and sensitivity of evolutionary inference, producing more robust results than single-genome analyses can provide. The genomes of 12 Drosophila species, ten of which are presented here for the first time (sechellia, simulans, yakuba, erecta, ananassae, persimilis, willistoni, mojavensis, virilis and grimshawi), illustrate how rates and patterns of sequence divergence across taxa can illuminate evolutionary processes on a genomic scale. These genome sequences augment the formidable genetic tools that have made Drosophila melanogaster a pre-eminent model for animal genetics, and will further catalyse fundamental research on mechanisms of development, cell biology, genetics, disease, neurobiology, behaviour, physiology and evolution. Despite remarkable similarities among these Drosophila species, we identified many putatively non-neutral changes in protein-coding genes, non-coding RNA genes, and cis-regulatory regions. These may prove to underlie differences in the ecology and behaviour of these diverse species.
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| 2. |
- Lindblad-Toh, Kerstin, et al.
(författare)
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Genome sequence, comparative analysis and haplotype structure of the domestic dog.
- 2005
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 1476-4687 .- 0028-0836. ; 438:7069, s. 803-19
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Tidskriftsartikel (refereegranskat)abstract
- Here we report a high-quality draft genome sequence of the domestic dog (Canis familiaris), together with a dense map of single nucleotide polymorphisms (SNPs) across breeds. The dog is of particular interest because it provides important evolutionary information and because existing breeds show great phenotypic diversity for morphological, physiological and behavioural traits. We use sequence comparison with the primate and rodent lineages to shed light on the structure and evolution of genomes and genes. Notably, the majority of the most highly conserved non-coding sequences in mammalian genomes are clustered near a small subset of genes with important roles in development. Analysis of SNPs reveals long-range haplotypes across the entire dog genome, and defines the nature of genetic diversity within and across breeds. The current SNP map now makes it possible for genome-wide association studies to identify genes responsible for diseases and traits, with important consequences for human and companion animal health.
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| 3. |
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| 4. |
- Prasad, G., et al.
(författare)
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Using motor imagery based brain-computer interface for post-stroke rehabilitation
- 2009
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Ingår i: 2009 4TH INTERNATIONAL IEEE/EMBS CONFERENCE ON NEURAL ENGINEERING. - 9781424420735 ; , s. 251-255
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Konferensbidrag (refereegranskat)abstract
- There is now sufficient evidence that using a rehabilitation protocol involving motor imagery (MI) practice (or mental practice (MP)) in conjunction with physical practice (PP) of goal-directed rehabilitation tasks leads to enhanced functional recovery of paralyzed limbs among stroke sufferers. It is however difficult to ensure patient engagement during MP in the absence of any on-line measure of the MP. Fortunately in an EEG-based brain-computer interface (BCI), an on-line measure of MI activity is used to devise neurofeedback for the BCI user to help him/her focus better on the task. This paper reports a pilot study in which an EEG-based BCI system is used to provide neurofeedback to stroke participants during the MP part of the rehabilitation protocol. This helps patients to undertake the MP with stronger focus. The participants included five chronic stroke sufferers. The trial was undertaken for 12 sessions over a period of 6 weeks. A set of rehabilitation outcome measures including action research arm test (ARAT) and motricity index was made use of in assessing functional recovery. Moderate improvements approaching a minimal clinically important difference (MCID) were observed for the ARAT. Small positive improvements were also observed in other outcome measures. Participants appeared highly enthusiastic about participating in the study and regularly attended all the sessions. Although without a randomized control trial, it is difficult to ascertain whether the enhanced rehabilitation gain is primarily because of BCI neurofeedack, the positive gains in outcome measures demonstrate the potential and feasibility of using BCI for post-stroke rehabilitation.
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