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- Klionsky, Daniel J., et al.
(författare)
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Guidelines for the use and interpretation of assays for monitoring autophagy
- 2012
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Ingår i: Autophagy. - : Informa UK Limited. - 1554-8635 .- 1554-8627. ; 8:4, s. 445-544
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Forskningsöversikt (refereegranskat)abstract
- In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
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| 2. |
- O'Donovan, Tony, et al.
(författare)
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The GINSENG system for wireless monitoring and control : Design and deployment experiences
- 2013
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Ingår i: ACM transactions on sensor networks. - : Association for Computing Machinery (ACM). - 1550-4867 .- 1550-4859. ; 10:1
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Tidskriftsartikel (refereegranskat)abstract
- Today's industrial facilities, such as oil refineries, chemical plants, and factories, rely on wired sensor systems to monitor and control the production processes. The deployment and maintenance of such cabled systems is expensive and inflexible. It is, therefore, desirable to replace or augment these systems using wireless technology, which requires us to overcome significant technical challenges. Process automation and control applications are mission-critical and require timely and reliable data delivery, which is difficult to provide in industrial environments with harsh radio environments. In this article, we present the GINSENG system which implements performance control to allow us to use wireless sensor networks for mission-critical applications in industrial environments. GINSENG is a complete system solution that comprises on-node system software, network protocols, and back-end systems with sophisticated data processing capability. GINSENG assumes that a deployment can be carefully planned. A TDMA-based MAC protocol, tailored to the deployment environment, is employed to provide reliable and timely data delivery. Performance debugging components are used to unintrusively monitor the system performance and identify problems as they occur. The article reports on a real-world deployment of GINSENG in an especially challenging environment of an operational oil refinery in Sines, Portugal. We provide experimental results from this deployment and share the experiences gained. These results demonstate the use of GINSENG for sensing and actuation and allow an assessment of its ability to operate within the required performance bounds. We also identify shortcomings that manifested during the evaluation phase, thus giving a useful perspective on the challenges that have to be overcome in these harsh application settings.
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| 4. |
- Yilmaz, Mehmet B., et al.
(författare)
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Renal Effects of Levosimendan : A Consensus Report
- 2013
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Ingår i: Cardiovascular Drugs and Therapy. - : Springer Science and Business Media LLC. - 0920-3206 .- 1573-7241. ; 27:6, s. 581-590
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Forskningsöversikt (refereegranskat)abstract
- Renal dysfunction is common in clinical settings in which cardiac function is compromised such as heart failure, cardiac surgery or sepsis, and is associated with high morbidity and mortality. Levosimendan is a calcium sensitizer and potassium channel opener used in the treatment of acute heart failure. This review describes the effects of the inodilator levosimendan on renal function. A panel of 25 scientists and clinicians from 15 European countries (Austria, Finland, France, Hungary, Germany, Greece, Italy, Portugal, the Netherlands, Slovenia, Spain, Sweden, Turkey, the United Kingdom, and Ukraine) convened and reached a consensus on the current interpretation of the renal effects of levosimendan described both in non-clinical research and in clinical study reports. Most reports on the effect of levosimendan indicate an improvement of renal function in heart failure, sepsis and cardiac surgery settings. However, caution should be applied as study designs differed from randomized, controlled studies to uncontrolled ones. Importantly, in the largest HF study (REVIVE I and II) no significant changes in the renal function were detected. As it regards the mechanism of action, the opening of mitochondrial K-ATP channels by levosimendan is involved through a preconditioning effect. There is a strong rationale for randomized controlled trials seeking beneficial renal effects of levosimendan. As an example, a study is shortly to commence to assess the role of levosimendan for the prevention of acute organ dysfunction in sepsis (LeoPARDS).
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