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- Campbell, PJ, et al.
(författare)
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Pan-cancer analysis of whole genomes
- 2020
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 1476-4687 .- 0028-0836. ; 578:7793, s. 82-
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Tidskriftsartikel (refereegranskat)abstract
- Cancer is driven by genetic change, and the advent of massively parallel sequencing has enabled systematic documentation of this variation at the whole-genome scale1–3. Here we report the integrative analysis of 2,658 whole-cancer genomes and their matching normal tissues across 38 tumour types from the Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium of the International Cancer Genome Consortium (ICGC) and The Cancer Genome Atlas (TCGA). We describe the generation of the PCAWG resource, facilitated by international data sharing using compute clouds. On average, cancer genomes contained 4–5 driver mutations when combining coding and non-coding genomic elements; however, in around 5% of cases no drivers were identified, suggesting that cancer driver discovery is not yet complete. Chromothripsis, in which many clustered structural variants arise in a single catastrophic event, is frequently an early event in tumour evolution; in acral melanoma, for example, these events precede most somatic point mutations and affect several cancer-associated genes simultaneously. Cancers with abnormal telomere maintenance often originate from tissues with low replicative activity and show several mechanisms of preventing telomere attrition to critical levels. Common and rare germline variants affect patterns of somatic mutation, including point mutations, structural variants and somatic retrotransposition. A collection of papers from the PCAWG Consortium describes non-coding mutations that drive cancer beyond those in the TERT promoter4; identifies new signatures of mutational processes that cause base substitutions, small insertions and deletions and structural variation5,6; analyses timings and patterns of tumour evolution7; describes the diverse transcriptional consequences of somatic mutation on splicing, expression levels, fusion genes and promoter activity8,9; and evaluates a range of more-specialized features of cancer genomes8,10–18.
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| 2. |
- Li, Yang, 1984, et al.
(författare)
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Design of Minimum Cost Degradation-Conscious Lithium-Ion Battery Energy Storage System to Achieve Renewable Power Dispatchability
- 2020
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Ingår i: Applied Energy. - : Elsevier BV. - 1872-9118 .- 0306-2619. ; 260
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Tidskriftsartikel (refereegranskat)abstract
- The application of lithium-ion (Li-ion) battery energy storage system (BESS) to achieve the dispatchability of a renewable power plant is examined. By taking into consideration the effects of battery cell degradation evaluated using electrochemical principles, a power flow model (PFM) of the BESS is developed specifically for use in system-level study. The PFM allows the long-term performance and lifetime of the battery be predicted as when the BESS is undertaking the power dispatch control task. Furthermore, a binary mode BESS control scheme is proposed to prevent the possible over-charge/over-discharge of the BESS due to the uncertain renewable input power. Analysis of the resulting new dispatch control scheme shows that a proposed adaptive BESS state of energy controller can guarantee the stability of the dispatch process. A particle swarm optimization algorithm is developed and is incorporated into a computational procedure for which the optimum battery capacity and power rating are determined, through minimizing the capital cost of the BESS plus the penalty cost of violating the dispatch power commitment. Results of numerical examples used to illustrate the proposed design approach show that in order to achieve hourly-constant power dispatchability of a 100-MW wind farm, the minimum-cost Li-ion BESS is rated 31-MW/22.6-MWh.
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