| 1. |
- Beal, Jacob, et al.
(författare)
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Robust estimation of bacterial cell count from optical density
- 2020
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Ingår i: Communications Biology. - : Springer Science and Business Media LLC. - 2399-3642. ; 3:1
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Tidskriftsartikel (refereegranskat)abstract
- Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data.
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| 2. |
- Wan, Cheng-Liang, et al.
(författare)
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基于玻璃毛细管的大气环境MeV质子微束的产生与测量 : [Production and measurement of MeV proton microbeams in atmospheric environment based on glass capillary]
- 2024
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Ingår i: Wuli xuebao. - 1000-3290. ; 73:10
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Tidskriftsartikel (refereegranskat)abstract
- 本文采用玻璃毛细管产生了大气环境中工作的2.5 MeV质子外束微束, 并对束斑直径及能量分布随玻璃毛细管与束流方向之间角度(倾角)变化进行测量. 测量结果表明, 在玻璃毛细管轴向与束流方向一致时(倾角为0°), 产生的微束中存在保持初始入射能量的直接穿透部分以及散射部分, 其中直接穿透的质子占比最大, 束斑直径也最大. 随着玻璃毛细管倾角的增大, 当其大于几何张角时, 束斑直径变小, 产生的微束全部为能量减小的散射部分, 直接穿透质子消失. 我们对质子在玻璃毛细管内传输时的内壁散射过程进行了模拟计算及离子轨迹分析, 发现大角度的散射部分决定了形成的外束微束斑外围轮廓, 而束斑中心区域由不与毛细管内壁产生任何作用的直接穿透离子构成, 其大小由玻璃毛细管出口直径以及几何容许张角决定. 采用玻璃毛细管产生的外束微束具有产生简单廉价, 微束区域定位简单的特点, 有望在辐射生物学、医学、材料等领域得到广泛应用.
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| 3. |
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| 4. |
- Kreibich, Heidi, et al.
(författare)
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Panta Rhei benchmark dataset : Socio-hydrological data of paired events of floods and droughts
- 2023
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Ingår i: Earth System Science Data. - : Copernicus Publications. - 1866-3508 .- 1866-3516. ; 15:5, s. 2009-2023
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Tidskriftsartikel (refereegranskat)abstract
- As the adverse impacts of hydrological extremes increase in many regions of the world, a better understanding of the drivers of changes in risk and impacts is essential for effective flood and drought risk management and climate adaptation. However, there is currently a lack of comprehensive, empirical data about the processes, interactions, and feedbacks in complex human-water systems leading to flood and drought impacts. Here we present a benchmark dataset containing socio-hydrological data of paired events, i.e. two floods or two droughts that occurred in the same area. The 45 paired events occurred in 42 different study areas and cover a wide range of socio-economic and hydro-climatic conditions. The dataset is unique in covering both floods and droughts, in the number of cases assessed and in the quantity of socio-hydrological data. The benchmark dataset comprises (1) detailed review-style reports about the events and key processes between the two events of a pair; (2) the key data table containing variables that assess the indicators which characterize management shortcomings, hazard, exposure, vulnerability, and impacts of all events; and (3) a table of the indicators of change that indicate the differences between the first and second event of a pair. The advantages of the dataset are that it enables comparative analyses across all the paired events based on the indicators of change and allows for detailed context- and location-specific assessments based on the extensive data and reports of the individual study areas. The dataset can be used by the scientific community for exploratory data analyses, e.g. focused on causal links between risk management; changes in hazard, exposure and vulnerability; and flood or drought impacts. The data can also be used for the development, calibration, and validation of socio-hydrological models. The dataset is available to the public through the GFZ Data Services (Kreibich et al., 2023, 10.5880/GFZ.4.4.2023.001).
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| 5. |
- Kreibich, Heidi, et al.
(författare)
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The challenge of unprecedented floods and droughts in risk management
- 2022
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Ingår i: Nature. - : Springer Nature. - 0028-0836 .- 1476-4687. ; 608:7921, s. 80-86
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Tidskriftsartikel (refereegranskat)abstract
- Risk management has reduced vulnerability to floods and droughts globally, yet their impacts are still increasing. An improved understanding of the causes of changing impacts is therefore needed, but has been hampered by a lack of empirical data4,5. On the basis of a global dataset of 45 pairs of events that occurred within the same area, we show that risk management generally reduces the impacts of floods and droughts but faces difficulties in reducing the impacts of unprecedented events of a magnitude not previously experienced. If the second event was much more hazardous than the first, its impact was almost always higher. This is because management was not designed to deal with such extreme events: for example, they exceeded the design levels of levees and reservoirs. In two success stories, the impact of the second, more hazardous, event was lower, as a result of improved risk management governance and high investment in integrated management. The observed difficulty of managing unprecedented events is alarming, given that more extreme hydrological events are projected owing to climate change.
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| 6. |
- Tian, Shangjie, et al.
(författare)
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Magnetic topological insulator MnBi6 Te10 with a zero-field ferromagnetic state and gapped Dirac surface states
- 2020
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Ingår i: Physical Review B. - 2469-9950. ; 102:3
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Tidskriftsartikel (refereegranskat)abstract
- Magnetic topological insulators (TIs) with nontrivial topological electronic structure and broken time-reversal symmetry exhibit various exotic topological quantum phenomena. The realization of such exotic phenomena at high temperature is one of the central topics in this area. We reveal that MnBi6Te10 is a magnetic TI with an antiferromagnetic ground state below 10.8 K whose nontrivial topology is manifested by Dirac-like surface states. The ferromagnetic axion insulator state with Z4=2 emerges once spins are polarized at a field as low as 0.1 T, accompanied with saturated anomalous Hall resistivity up to 10 K. Such a ferromagnetic state is preserved even with an external field down to zero at 2 K. Theoretical calculations indicate that the few-layer ferromagnetic MnBi6Te10 is also topologically nontrivial with a nonzero Chern number. Angle-resolved photoemission spectroscopy experiments further reveal three types of Dirac surface states arising from different terminations on the cleavage surfaces, one of which has insulating behavior with an energy gap of ∼28 meV at the Dirac point. These outstanding features suggest that MnBi6Te10 is a promising system to realize various topological quantum effects at zero field and high temperature.
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| 7. |
- Chen, Ruilin, et al.
(författare)
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Experimental demonstration of real-time optical DFT-S DMT signal transmission for a blue-LED-based UWOC system using spatial diversity reception
- 2023
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Ingår i: Applied Optics. - : Optica Publishing Group. - 1559-128X .- 2155-3165. ; 62:3, s. 541-551
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Tidskriftsartikel (refereegranskat)abstract
- Underwater wireless optical communication (UWOC) has broad prospects in underwater real-time applications. We design and experimentally demonstrate a real-time discrete Fourier transform spread discrete multi-tone (DFT-S DMT) signal transmission based on a field programmable gate array for a blue-LED-based UWOC system with a data rate of up to 30 Mbps over a 15-m underwater channel. The architecture and usage of an on-chip resource as well as power consumption are analyzed and discussed. To reduce the impacts of multipath fading and received intensity fluctuation, spatial diversity reception is also introduced. Furthermore, the receiver sensitivity at a speci-fied bit error rate (BER) threshold and the quality of the images are evaluated using three types of Reed-Solomon (RS) codes. At the BER threshold of 10-4, over 2.8-dB receiver sensitivity improvement is obtained by the DFT-S DMT scheme with the RS (64, 56) code as compared to the uncoded one at the data rate of 30 Mbps. The perform-ance of BER, color difference, and structural similarity in the image transmission of DFT-S DMT is superior to that of the conventional hard clipping quadrature amplitude modulation DMT in a high-data-rate region because of the low peak-to-average-power ratio and ability to mitigate high-frequency fading in a band-limited UWOC system. With schemes of the RS code, DFT-S, and diversity reception, error-free transmission of images is achieved over a 15-m water channel. The proposed UWOC system has the advantages of low power consumption and porta-bility, which foresees a bright future in underwater applications over short to moderate distances.
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| 8. |
- Fei, Chao, et al.
(författare)
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100-m/3-Gbps underwater wireless optical transmission using a wideband photomultiplier tube (PMT)
- 2022
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Ingår i: Optics Express. - : The Optical Society. - 1094-4087. ; 30:2, s. 2326-2337
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Tidskriftsartikel (refereegranskat)abstract
- In this paper, a wideband photomultiplier tube (PMT)-based underwater wireless optical communication (UWOC) system is proposed and a comprehensive experimental study of the proposed PMT-based UWOC system is conducted, in which the transmission distance, data rate, and attenuation length (AL) is pushed to 100.6 meters, 3 Gbps, and 6.62, respectively. The receiver sensitivity at 100.6-meter underwater transmission is as low as -40 dBm for the 1.5-Gbps on-off keying (00K) modulation signal. To the best of our knowledge, this is the first Gbps-class UWOC experimental demonstration in >100-meter transmission that has ever been reported. To further minimize the complexity of channel equalization, a sparsity-aware equalizer with orthogonal matching pursuit is adopted to reduce the number of the filter coefficients by more than 50% while keeping slight performance penalty. Furthermore, the performance of the proposed PMT-based LIWOC system in different turbidity waters is investigated, which shows the robustness of the proposed scheme. Thanks to the great sensitivity (approaching the quantum limit) and a relatively larger effective area, benefits of misalignment tolerance contributed by the PMT is verified through a proof-of-concept LIWOC experiment.
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| 9. |
- Fei, Chao, et al.
(författare)
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Underwater wireless optical communication utilizing low-complexity sparse pruned-term-based nonlinear decision-feedback equalization
- 2022
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Ingår i: Applied Optics. - : Optica Publishing Group. - 1559-128X .- 2155-3165. ; 61:22, s. 6534-6543
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Tidskriftsartikel (refereegranskat)abstract
- The nonlinearity of the light-emitting diode (LED) in underwater wireless optical communication (UWOC) systems is considered the one major limiting factor that degrades the system's performance. Volterra series-based nonlinear equalization is widely employed to mitigate such nonlinearity in communication systems. However, the conventional Volterra series-based model is of high complexity, especially for the nonlinearity of higher-order terms or longer memory lengths. In this paper, by pruning away some negligible beating terms and adaptively picking out some of the dominant terms while discarding the trivial ones, we propose and experimentally demonstrate a sparse pruned-term-based nonlinear decision-feedback equalization (SPT-NDFE) scheme for the LED-based UWOC system with an inappreciable performance degradation as compared to systems without the pruning strategy. Meanwhile, by replacing the self/cross beating terms with the terms formed by the absolute operation of a sum of two input samples instead of the product operation terms, a sparse pruned-term-based absolute operation nonlinear decision-feedback equalization (SPT-ANDFE) scheme is also introduced to further reduce complexity. The experimental results show that the SPT-NDFE scheme exhibits comparable performance as compared to the conventional NDFE (nonlinear decision-feedback equalization) scheme with lower complexity (the nonlinear coefficients are reduced by 63.63% as compared to the conventional NDFE scheme). While the SPT-ANDFE scheme yields suboptimal performance with further reduced complexity at the expense of a slight performance degradation, the robustness of the proposed schemes in different turbidity waters is experimentally verified. The proposed channel equalization schemes with low complexity and high performance are promising for power/energy-sensitive UWOC systems.
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| 10. |
- Hong, Xiaojian, et al.
(författare)
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Experimental Demonstration of 55-m/2-Gbps Underwater Wireless Optical Communication Using SiPM Diversity Reception and Nonlinear Decision-Feedback Equalizer
- 2022
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Ingår i: IEEE Access. - : Institute of Electrical and Electronics Engineers (IEEE). - 2169-3536. ; 10, s. 47814-47823
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Tidskriftsartikel (refereegranskat)abstract
- Underwater wireless optical communication (UWOC) is considered as an enabling technology with a mass of potential applications. The silicon photomultiplier (SiPM) exhibits a bright prospect for UWOC thanks to the traits of low-light detection capability, low-voltage operation, and superior operability. However, the performance of the SiPM-based UWOC system is severely degraded by the dead-time caused nonlinear response. In this paper, to mitigate the dead-time induced nonlinear distortion and explore the achievable capacity of the newly developed SiPM, we propose and experimentally demonstrate a 55-m / 2-Gbps UWOC system by virtue of SiPM diversity reception and nonlinear decision-feedback equalizer (NDFE). The performance of NDFE is superior to that of the conventional decision-feedback equalizer (DEE), and NDFE with a pruning factor of 5 declares similar performance as that without pruning strategy, while the number of the nonlinear equalizer can be reduced by similar to 31.8%. Significant performance improvement is also obtained by the proposed scheme under different turbidity waters. The measured data rate is pushed from 1 Gbps to 2 Gbps with a receiver sensitivity as low as -41.96 dBm, which to the best of our knowledge is the largest data rate ever achieved using the off-the-shelf SiPM among the reported UWOC works. In accordance with the receiver sensitivity and the model of optical propagation in the water channel, the maximum attainable distance/data rate is predicted to be 147 m/ 1 Gbps and 128 m/2 Gbps with the proposed scheme. The research results are promising for long-reach and high-speed UWOC.
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