| 1. |
- Wade, C. M., et al.
(författare)
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Genome Sequence, Comparative Analysis, and Population Genetics of the Domestic Horse
- 2009
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Ingår i: Science. - : American Association for the Advancement of Science (AAAS). - 0036-8075 .- 1095-9203. ; 326:5954, s. 865-867
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Tidskriftsartikel (refereegranskat)abstract
- We report a high-quality draft sequence of the genome of the horse ( Equus caballus). The genome is relatively repetitive but has little segmental duplication. Chromosomes appear to have undergone few historical rearrangements: 53% of equine chromosomes show conserved synteny to a single human chromosome. Equine chromosome 11 is shown to have an evolutionary new centromere devoid of centromeric satellite DNA, suggesting that centromeric function may arise before satellite repeat accumulation. Linkage disequilibrium, showing the influences of early domestication of large herds of female horses, is intermediate in length between dog and human, and there is long-range haplotype sharing among breeds.
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| 2. |
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| 3. |
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| 4. |
- Awano, Tomoyuki, et al.
(författare)
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Genome-wide association analysis reveals a SOD1 mutation in canine degenerative myelopathy that resembles amyotrophic lateral sclerosis
- 2009
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Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 106:8, s. 2794-2799
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Tidskriftsartikel (refereegranskat)abstract
- Canine degenerative myelopathy (DM) is a fatal neurodegenerative disease prevalent in several dog breeds. Typically, the initial progressive upper motor neuron spastic and general proprioceptive ataxia in the pelvic limbs occurs at 8 years of age or older. If euthanasia is delayed, the clinical signs will ascend, causing flaccid tetraparesis and other lower motor neuron signs. DNA samples from 38 DM-affected Pembroke Welsh corgi cases and 17 related clinically normal controls were used for genome-wide association mapping, which produced the strongest associations with markers on CFA31 in a region containing the canine SOD1 gene. SOD1 was considered a regional candidate gene because mutations in human SOD1 can cause amyotrophic lateral sclerosis (ALS), an adult-onset fatal paralytic neurodegenerative disease with both upper and lower motor neuron involvement. The resequencing of SOD1 in normal and affected dogs revealed a G to A transition, resulting in an E40K missense mutation. Homozygosity for the A allele was associated with DM in 5 dog breeds: Pembroke Welsh corgi, Boxer, Rhodesian ridgeback, German Shepherd dog, and Chesapeake Bay retriever. Microscopic examination of spinal cords from affected dogs revealed myelin and axon loss affecting the lateral white matter and neuronal cytoplasmic inclusions that bind anti-superoxide dismutase 1 antibodies. These inclusions are similar to those seen in spinal cord sections from ALS patients with SOD1 mutations. Our findings identify canine DM to be the first recognized spontaneously occurring animal model for ALS.
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| 5. |
- Folsom, C. P., et al.
(författare)
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Magnetic, chemical and rotational properties of the Herbig Ae/Be binary system HD 72106
- 2008
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Ingår i: Contributions of the Astronomical Observatory Skalnaté Pleso. - 1335-1842. ; 38:2, s. 245-250
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Tidskriftsartikel (refereegranskat)abstract
- Recently, strong, globally-ordered magnetic fields have been detected in some Herbig Ae and Be (HAeBe) stars, suggesting a possible evolutionary connection to main sequence magnetic chemically peculiar Ap and Bp stars. We have undertaken a detailed study of the binary system HD 72106, which contains a B9 magnetic primary and a HAeBe secondary, using the ESPaDOnS spectropolarimeter mounted on the CFHT. A careful analysis of the very young primary reveals that it has an approximately dipolar magnetic field geometry, strong chemical peculiarities, and strong surface chemical abundance inhomogeneities. Thus the primary is very similar to an Ap/Bp star despite having completed less then 1.5% of its main sequence life, and possible still being on the pre-main sequence. In contrast, a similar analysis of the secondary reveals solar chemical abundances and no magnetic field.
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| 6. |
- Folsom, C. P., et al.
(författare)
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Magnetic fields and chemical peculiarities of the very young intermediate-mass binary system HD 72106
- 2008
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Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 391:2, s. 901-914
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Tidskriftsartikel (refereegranskat)abstract
- The recently discovered magnetic Herbig Ae and Be stars may provide qualitatively new information about the formation and evolution of magnetic Ap and Bp stars. We have performed a detailed investigation of one particularly interesting binary system with a Herbig Ae secondary and a late B-type primary possessing a strong, globally ordered magnetic field. 20 high-resolution Stokes V spectra of the system were obtained with the ESPaDOnS instrument mounted on the Canada-France-Hawaii Telescope. In these observations we see clear evidence for a magnetic field in the primary, but no evidence for a magnetic field in the secondary. A detailed abundance analysis was performed for both stars, revealing strong chemical peculiarities in the primary and normal chemical abundances in the secondary. The primary is strongly overabundant in Si, Cr and other iron-peak elements, as well as Nd, and underabundant in He. The primary therefore appears to be a very young Bp star. In this context, line profile variations of the primary suggest non-uniform lateral distributions of surface abundances. Interpreting the 0.639 95 +/- 0.000 09 d variation period of the Stokes I and V profiles as the rotational period of the star, we have modelled the magnetic field geometry and the surface abundance distributions of Si, Ti, Cr and Fe using magnetic Doppler imaging. We derive a dipolar geometry of the surface magnetic field, with a polar strength B-d = 1230 G and an obliquity beta = 57 degrees. The distributions Ti, Cr and Fe are all qualitatively similar, with an elongated patch of enhanced abundance situated near the positive magnetic pole. The Si distribution is somewhat different, and its relationship to the magnetic field geometry less clear.
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| 7. |
- Fossati, L., et al.
(författare)
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Chemical evolution of A- and B-type stars in open clusters : observed abundances vs. diffusion models
- 2008
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Ingår i: Contributions of the Astronomical Observatory Skalnaté Pleso. - 1335-1842. ; 38:2, s. 123-128
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Tidskriftsartikel (refereegranskat)abstract
- We have decided to address the problem of how abundances and peculiarities change during main sequence evolution. We have setup a program to measure the atmospheric abundance patterns from tens of A-type star members of clusters of different ages, and compare the results with theory predictions. In this paper we present the overall project and we focus on the results obtained for a sample of Am stars of the Praesepe cluster (log t = 8.85 +/- 0.15; Gonzalez-Garcia et al., 2006). We have obtained spectra for eight Am stars, two normal A-type stars and one blue straggler, that are probable members of the Praesepe cluster. For all of these stars we have determined fundamental parameters and photospheric abundances for a large number of chemical elements. For seven stars we also obtained spectra in circular polarisation and applied the LSD technique to measure the mean longitudinal magnetic field. We have found good agreement between abundance predictions of diffusion models and measured abundances, except for Na and S. Li appears to be overabundant in three stars of our sample. No magnetic field was detected in any of the analysed stars.
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| 8. |
- Fossati, L., et al.
(författare)
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Late stages of the evolution of A-type stars on the main sequence : Comparison between observed chemical abundances and diffusion models for 8 Am stars of the Praesepe cluster
- 2007
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Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 476:2, s. 911-925
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Tidskriftsartikel (refereegranskat)abstract
- Aims. We aim to provide observational constraints on diffusion models that predict peculiar chemical abundances in the atmospheres of Am stars. We also intend to check if chemical peculiarities and slow rotation can be explained by the presence of a weak magnetic field. Methods. We have obtained high resolution, high signal-to-noise ratio spectra of eight previously-classified Am stars, two normal A-type stars and one Blue Straggler, considered to be members of the Praesepe cluster. For all of these stars we have determined fundamental parameters and photospheric abundances for a large number of chemical elements, with a higher precision than was ever obtained before for this cluster. For seven of these stars we also obtained spectra in circular polarization and applied the LSD technique to constrain the longitudinal magnetic field. Results. No magnetic field was detected in any of the analysed stars. HD 73666, a Blue Straggler previously considered as an Ap (Si) star, turns out to have the abundances of a normal A-type star. Am classification is not confirmed for HD 72942. For HD 73709 we have also calculated synthetic Aa photometry that is in good agreement with the observations. There is a generally good agreement between abundance predictions of diffusion models and values that we have obtained for the remaining Am stars. However, the observed Na and S abundances deviate from the predictions by 0.6 dex and ≥0.25 dex respectively. Li appears to be overabundant in three stars of our sample.
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| 9. |
- Fossati, L., et al.
(författare)
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The chemical abundance analysis of normal early A- and late B-type stars
- 2009
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Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 503:3, s. 945-962
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Forskningsöversikt (refereegranskat)abstract
- Context. Modern spectroscopy of early-type stars often aims at studying complex physical phenomena such as stellar pulsation, the peculiarity of the composition of the photosphere, chemical stratification, the presence of a magnetic field, and its interplay with the stellar atmosphere and the circumstellar environment. Comparatively less attention is paid to identifying and studying the "normal" A- and B-type stars and testing how the basic atomic parameters and standard spectral analysis allow one to fit the observations. By contrast, this kind of study is paramount for eventually allowing one to correctly quantify the impact of the various physical processes that occur inside the atmospheres of A- and B-type stars. Aims. We wish to establish whether the chemical composition of the solar photosphere can be regarded as a reference for early A- and B-late B-type stars. Methods. We have obtained optical high-resolution, high signal-to-noise ratio spectra of three slowly rotating early-type stars (HD 145788, 21 Peg and pi Cet) that show no obvious sign of chemical peculiarity, and performed a very accurate LTE abundance analysis of up to 38 ions of 26 elements (for 21 Peg), using a vast amount of spectral lines visible in the spectral region covered by our spectra. Results. We provide an exhaustive description of the abundance characteristics of the three analysed stars with a critical review of the line parameters used to derive the abundances. We compiled a table of atomic data for more than 1100 measured lines that may be used in the future as a reference. The abundances we obtained for He, C, Al, S, V, Cr, Mn, Fe, Ni, Sr, Y, and Zr are compatible with the solar ones derived with recent 3D radiative-hydrodynamical simulations of the solar photosphere. The abundances of the remaining studied elements show some degree of discrepancy compared to the solar photosphere. Those of N, Na, Mg, Si, Ca, Ti, and Nd may well be ascribed to non-LTE effects; for P, Cl, Sc and Co, non-LTE effects are totally unknown; O, Ne, Ar, and Ba show discrepancies that cannot be ascribed to non-LTE effects. The discrepancies obtained for O (in two stars) and Ne agree with very recent non-LTE abundance analysis of early B-type stars in the solar neighbourhood.
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| 10. |
- Fossati, L., et al.
(författare)
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The effect of rotation on the abundances of the chemical elements of the A-type stars in the Praesepe cluster
- 2008
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Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 483:3, s. 891-902
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Tidskriftsartikel (refereegranskat)abstract
- Aims. We study how chemical abundances of late B-, A-, and early F-type stars evolve with time, and we search for correlations between the abundance of chemical elements and other stellar parameters, such as effective temperature and upsilon sin i. Methods. We observed a large number of B-, A-, and F-type stars belonging to open clusters of different ages. In this paper we concentrate on the Praesepe cluster (log t = 8.85), for which we have obtained high-resolution, high signal-to-noise ratio spectra of sixteen normal A- and F-type stars and one Am star, using the SOPHIE spectrograph of the Observatoire de Haute-Provence. For all the observed stars, we derived fundamental parameters and chemical abundances. In addition, we discuss another eight Am stars belonging to the same cluster, for which the abundance analysis had been presented in a previous paper. Results. We find a strong correlation between the peculiarity of Am stars and upsilon sin i. The abundance of the elements underabundant in Am stars increases with upsilon sin i, while it decreases for the overabundant elements. Chemical abundances of various elements appear correlated with the iron abundance.
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