| 1. |
- Clark, M. S., et al.
(författare)
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Multi-omics for studying and understanding polar life
- 2023
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Ingår i: Nature Communications. - : NATURE PORTFOLIO. - 2041-1723. ; 14
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Tidskriftsartikel (refereegranskat)abstract
- Polar ecosystems are experiencing amongst the most rapid rates of regional warming on Earth. Here, we discuss ‘omics’ approaches to investigate polar biodiversity, including the current state of the art, future perspectives and recommendations. We propose a community road map to generate and more fully exploit multi-omics data from polar organisms. These data are needed for the comprehensive evaluation of polar biodiversity and to reveal how life evolved and adapted to permanently cold environments with extreme seasonality. We argue that concerted action is required to mitigate the impact of warming on polar ecosystems via conservation efforts, to sustainably manage these unique habitats and their ecosystem services, and for the sustainable bioprospecting of novel genes and compounds for societal gain.
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| 2. |
- Fazey, Ioan, et al.
(författare)
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Transforming knowledge systems for life on Earth : Visions of future systems and how to get there
- 2020
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Ingår i: Energy Research & Social Science. - : Elsevier. - 2214-6296 .- 2214-6326. ; 70
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Tidskriftsartikel (refereegranskat)abstract
- Formalised knowledge systems, including universities and research institutes, are important for contemporary societies. They are, however, also arguably failing humanity when their impact is measured against the level of progress being made in stimulating the societal changes needed to address challenges like climate change. In this research we used a novel futures-oriented and participatory approach that asked what future envisioned knowledge systems might need to look like and how we might get there. Findings suggest that envisioned future systems will need to be much more collaborative, open, diverse, egalitarian, and able to work with values and systemic issues. They will also need to go beyond producing knowledge about our world to generating wisdom about how to act within it. To get to envisioned systems we will need to rapidly scale methodological innovations, connect innovators, and creatively accelerate learning about working with intractable challenges. We will also need to create new funding schemes, a global knowledge commons, and challenge deeply held assumptions. To genuinely be a creative force in supporting longevity of human and non-human life on our planet, the shift in knowledge systems will probably need to be at the scale of the enlightenment and speed of the scientific and technological revolution accompanying the second World War. This will require bold and strategic action from governments, scientists, civic society and sustained transformational intent.
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| 3. |
- Mauersberger, C, et al.
(författare)
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Loss of soluble guanylyl cyclase in platelets contributes to atherosclerotic plaque formation and vascular inflammation
- 2022
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Ingår i: Nature cardiovascular research. - : Springer Science and Business Media LLC. - 2731-0590. ; 1:12, s. 1174-1186
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Tidskriftsartikel (refereegranskat)abstract
- Variants in genes encoding the soluble guanylyl cyclase (sGC) in platelets are associated with coronary artery disease (CAD) risk. Here, by using histology, flow cytometry and intravital microscopy, we show that functional loss of sGC in platelets of atherosclerosis-prone Ldlr−/− mice contributes to atherosclerotic plaque formation, particularly via increasing in vivo leukocyte adhesion to atherosclerotic lesions. In vitro experiments revealed that supernatant from activated platelets lacking sGC promotes leukocyte adhesion to endothelial cells (ECs) by activating ECs. Profiling of platelet-released cytokines indicated that reduced platelet angiopoietin-1 release by sGC-depleted platelets, which was validated in isolated human platelets from carriers of GUCY1A1 risk alleles, enhances leukocyte adhesion to ECs. Importantly, pharmacological sGC stimulation increased platelet angiopoietin-1 release in vitro and reduced leukocyte recruitment and atherosclerotic plaque formation in atherosclerosis-prone Ldlr−/− mice. Therefore, pharmacological sGC stimulation might represent a potential therapeutic strategy to prevent and treat CAD.
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| 4. |
- Borghini, Alessia, et al.
(författare)
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Halogen-bearing metasomatizing melt preserved in high-pressure (HP) eclogites of Pfaffenberg, Bohemian Massif
- 2024
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Ingår i: European journal of mineralogy. - : Copernicus Publications. - 0935-1221 .- 1617-4011. ; 36:2, s. 279-300
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Tidskriftsartikel (refereegranskat)abstract
- Primary granitic melt inclusions are trapped in garnets of eclogites in the garnet peridotite body of Pfaffenberg, Granulitgebirge (Bohemian Massif, Germany). These polycrystalline inclusions, based on their nature and composition, can be called nanogranitoids and contain mainly phlogopite/biotite, kumdykolite, quartz/rare cristobalite, a phase with the main Raman peak at 412 cm - 1 , a phase with the main Raman peak at 430 cm - 1 , osumilite and plagioclase. The melt is hydrous, peraluminous and granitic and significantly enriched in large ion lithophile elements (LILE), Th, U, Li, B and Pb. The melt major element composition resembles that of melts produced by the partial melting of metasediments, as also supported by its trace element signature characterized by elements (LILE, Pb, Li and B) typical of the continental crust. These microstructural and geochemical features suggest that the investigated melt originated in the subducted continental crust and interacted with the mantle to produce the Pfaffenberg eclogite. Moreover, in situ analyses and calculations based on partition coefficients between apatite and melt show that the melt was also enriched in Cl and F, pointing toward the presence of a brine during melting.The melt preserved in inclusions can thus be regarded as an example of a metasomatizing agent present at depth and responsible for the interaction between the crust and the mantle. Chemical similarities between this melt and other metasomatizing melts measured in other eclogites from the Granulitgebirge and Erzgebirge, in addition to the overall similar enrichment in trace elements observed in other metasomatized mantle rocks from central Europe, suggest an extended crustal contamination of the mantle beneath the Bohemian Massif during the Variscan orogeny.
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| 5. |
- Lemaigre, Camille, et al.
(författare)
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N-BAR and F-BAR proteins - Endophilin-A3 and PSTPIP1 - control clathrin-independent endocytosis of L1CAM
- 2023
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Ingår i: Traffic: the International Journal of Intracellular Transport. - : Wiley. - 1398-9219. ; 24:4, s. 190-212
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Tidskriftsartikel (refereegranskat)abstract
- Recent advances in the field demonstrate the high diversity and complexity of endocytic pathways. In the current study, we focus on the endocytosis of L1CAM. This glycoprotein plays a major role in the development of the nervous system, and is involved in cancer development and is associated with metastases and poor prognosis. Two L1CAM isoforms are subject to endocytosis: isoform 1, described as a clathrin-mediated cargo; isoform 2, whose endocytosis has never been studied. Deciphering the molecular machinery of isoform 2 internalisation should contribute to a better understanding of its pathophysiological role. First, we demonstrated in our cellular context that both isoforms of L1CAM are mainly a clathrin-independent cargo, which was not expected for isoform 1. Second, the mechanism of L1CAM endocytosis is specifically mediated by the N-BAR domain protein endophilin-A3. Third, we discovered PSTPIP1, an F-BAR domain protein, as a novel actor in this endocytic process. Finally, we identified galectins as endocytic partners and negative regulators of L1CAM endocytosis. In summary, the interplay of the BAR proteins endophilin-A3 and PSTPIP1, and galectins fine tune the clathrin-independent endocytosis of L1CAM.
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| 6. |
- Roth, I., et al.
(författare)
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Reliable Recovery of Hierarchically Sparse Signals for Gaussian and Kronecker Product Measurements
- 2020
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Ingår i: Ieee Transactions on Signal Processing. - : Institute of Electrical and Electronics Engineers (IEEE). - 1053-587X .- 1941-0476. ; 68, s. 4002-4016
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Tidskriftsartikel (refereegranskat)abstract
- We propose and analyze a solution to the problem of recovering a block sparse signal with sparse blocks from linear measurements. Such problems naturally emerge inter alia in the context of mobile communication, in order to meet the scalability and low complexity requirements of massive antenna systems and massive machine-type communication. We introduce a new variant of the Hard Thresholding Pursuit (HTP) algorithm referred to as HiHTP. We provide both a proof of convergence and a recovery guarantee for noisy Gaussian measurements that exhibit an improved asymptotic scaling in terms of the sampling complexity in comparison with the usual HTP algorithm. Furthermore, hierarchically sparse signals and Kronecker product structured measurements naturally arise together in a variety of applications. We establish the efficient reconstruction of hierarchically sparse signals from Kronecker product measurements using the HiHTP algorithm. Additionally, we provide analytical results that connect our recovery conditions to generalized coherencemeasures. Again, our recovery results exhibit substantial improvement in the asymptotic sampling complexity scaling over the standard setting. Finally, we validate in numerical experiments that for hierarchically sparse signals, HiHTP performs significantly better compared to HTP.
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