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| 2. |
- Antonsson, Johan, et al.
(författare)
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In-vivo reflection spectroscopy measurements in pig brain during stereotactic surgery
- 2003
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Ingår i: Biophotonics West. - : SPIE. ; , s. 242-250
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Konferensbidrag (refereegranskat)abstract
- Radiofrequency (RF) lesioning in the human brain is a commonsurgical therapy for relieving severe pain as well as formovement disorders such as Parkinsonia. During the procedure a smallelectrode is introduced by stereotactic means towards a target arealocalized by CT or MRI. An RF-current is applied throughthe electrode tip when positioned in the target area. Thetissue in the proximity of the tip is heated bythe current and finally coagulated.The overall aim of this studywas to improve the RF-technique and its ability to estimatelesion size by means of optical methods. Therefore, the opticaldifferences between white and gray matter, as well as lesionedand unlesioned tissue were investigated. Reflection spectroscopy measurements in therange of 450-800 nm were conducted on fully anesthetized pigsduring stereotactic RF-lesioning (n=6). Light from a tungsten lamp wasguided to the electrode tip through optical fibers, inserted alonga 2 mm in diameter monopolar RF-electrode. Measurements were performedin steps of 0-10 mm from the target in eachhemisphere towards the entry point of the skull. In thecentral gray of the porcine brain measurements were performed bothbefore and after the creation of a lesion. A totalof 55 spectra were collected during this study. Correlation totissue type was done using post-operative MR-images. The spectral signaturefor white and gray matter differs significantly for the entirespectral range of 450-800 nm. Pre- and post-lesioning reflection spectroscopyshowed the largest differences below 600 and above 620 nm,which implies that lasers within this wavelength range may beuseful for in-vivo measurements of tissue optical changes during RF-lesioning.
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| 3. |
- Antonsson, Johan, 1973-
(författare)
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Optical measurements in brain tissue during radio frequency lesioning
- 2004
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Licentiatavhandling (övrigt vetenskapligt/konstnärligt)abstract
- Radio frequency (RF) lesioning is a well well-known procedure within the field of stereotactic neurosurgery, commonly used for the treatment of movement disorders. During the intervention, an RF-electrode is inserted into the deeper parts of the brain, where a small volume of malfunctioning brain tissue will be coagulated. This procedure is irreversible, as a result, the size and position of the created lesion is crucial in order to avoid unwanted side effects. In this thesis a further development of the RF-technology is presented in order to follow a lesioning process and to estimate the created lesion size. Software, electronics, fiber optics and an RF-electrode equipped with optical fibers was developed and evaluated.Diffuse reflectance spectroscopy measurements at 450-800 nm in the central gray of porcine brain have been performed with the developed RF-electrode. Measurements of white and gray brain matter showed a large reflectance difference in the investigated wavelength interval, with higher reflectivity for white brain matter. Reflectance differences between native and coagulated, white and gray brain matter were also found .In-vitro laser Doppler perfusion monitoring measurements at 633 nm have also been performed in a newly designed flow model. An albumin solution with added glass microspheres was placed on top of a revolving disc. The motion of the liquid surrounding the electrode tip simulated a perfusion situation. Changes in both laser Doppler perfusion and total backscattered light intensity signals were collected during the creation of different sized coagulations. The volume, width and length of the created coagulations are correlated to the measured signal changes in-vitro, where larger coagulations displayed larger signal changes. The laser Doppler perfusion and backscattered light intensity signals can be used to follow the lesioning time course and estimate the developed lesion size in-vitro.
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| 4. |
- Dahlström, Örjan, et al.
(författare)
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Clustering as a data mining method in a Web-based system for thoracic surgery
- 2001
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Ingår i: Journal of the Medical Informatics Association. Symposium Supplement. - Washington : Hanley&Belfus. - 1560535369 ; , s. 888-
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Konferensbidrag (refereegranskat)abstract
- Cluster analysis is one way of data mining from large amounts of information. Being able to perform series of analyses, varying clinical criteria and requests, expected results of the clustering might be truly rewarding. Instead of having a few hypotheses prepared and tested, medical experts can be surprised by obtaining a set of hypotheses to further validate and work on.Internet technologies enable a substantial flexibility that can be taken advantage of when implementing a Web-based tool. Division of Medical Informatics together with Linkoping Heart Center of the Linkoping University is developing procedures for multivariate clustering within the Web-based AssistMe1 system.
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| 5. |
- Kircher, Albert, et al.
(författare)
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Knowledge representation forms for data mining methodologies as applied in thoracic surgery
- 2000
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Ingår i: AMIA,2000. - Philadelphia : Hanley & Belfus Inc. - 156053480X ; , s. 428-432
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Konferensbidrag (refereegranskat)abstract
- Typical ways of disseminating and using results of clinical research are scientific journals and reports. Presentation forms are condensed and comprehensible mainly to the experts following the specific topics. A vast amount of information remains unutilized due to the complex form of presenting the knowledge. Subject of this research is to explore possibilities of representation and also visualization of the results obtained using data mining methodologies. The intention is to formulate more than scientific ways to communicate facts that are of interest for the clinicians, medical students and even patients. Internet technologies as already widely established media support knowledge representation forms such as hypertext documents and structured knowledge components. The "Assist Me" decision support system for surgical treatment of cardiac patients integrates several forms of data mining and representation methodologies. We are showing a feasibility study in which scientific outcomes were forwarded to a broad group of potential users.
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| 6. |
- Nore, Beston F, et al.
(författare)
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Identification of phosphorylation sites within the SH3 domains of Tec family tyrosine kinases
- 2003
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Ingår i: Biochimica et Biophysica Acta. - 0006-3002 .- 1878-2434. ; 1645:2, s. 123-132
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Tidskriftsartikel (refereegranskat)abstract
- Tec family protein tyrosine kinases (TFKs) play a central role in hematopoietic cellular signaling. Initial activation takes place through specific tyrosine phosphorylation situated in the activation loop. Further activation occurs within the SH3 domain via a transphosphorylation mechanism, which for Bruton's tyrosine kinase (Btk) affects tyrosine 223. We found that TFKs phosphorylate preferentially their own SH3 domains, but differentially phosphorylate other member family SH3 domains, whereas non-related SH3 domains are not phosphorylated. We demonstrate that SH3 domains are good and reliable substrates. We observe that transphosphorylation is selective not only for SH3 domains, but also for dual SH3SH2 domains. However, the dual domain is phosphorylated more effectively. The major phosphorylation sites were identified as conserved tyrosines, for Itk Y180 and for Bmx Y215, both sites being homologous to the Y223 site in Btk. There is, however, one exception because the Tec-SH3 domain is phosphorylated at a non-homologous site, nevertheless a conserved tyrosine, Y206. Consistent with these findings, the 3D structures for SH3 domains point out that these phosphorylated tyrosines are located on the ligand-binding surface. Because a number of Tec family kinases are coexpressed in cells, it is possible that they could regulate the activity of each other through transphosphorylation.
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