| 1. |
- Abi Ghaida, Fatima, et al.
(author)
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Enzymatic N2 activation : general discussion
- 2023
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In: Faraday discussions. - : Royal Society of Chemistry. - 1359-6640 .- 1364-5498. ; 243, s. 287-295
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Journal article (pop. science, debate, etc.)
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| 2. |
- Chrysina, Maria, et al.
(author)
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Five-coordinate Mn-IV intermediate in the activation of nature's water splitting cofactor
- 2019
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In: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 116:34, s. 16841-16846
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Journal article (peer-reviewed)abstract
- Nature's water splitting cofactor passes through a series of catalytic intermediates (S-0-S-4) before O-O bond formation and O-2 release. In the second last transition (S-2 to S-3) cofactor oxidation is coupled to water molecule binding to Mn1. It is this activated, water-enriched all Mn-IV form of the cofactor that goes on to form the O-O bond, after the next light-induced oxidation to S-4. How cofactor activation proceeds remains an open question. Here, we report a so far not described intermediate (S-3') in which cofactor oxidation has occurred without water insertion. This intermediate can be trapped in a significant fraction of centers (> 50%) in (i) chemical-modified cofactors in which Ca2+ is exchanged with Sr2+; the Mn4O5Sr cofactor remains active, but the S-2-S-3 and S-3-S-0 transitions are slower than for the Mn4O5Ca cofactor; and (ii) upon addition of 3% vol/vol methanol; methanol is thought to act as a substrate water analog. The S-3' electron paramagnetic resonance (EPR) signal is significantly broader than the untreated S-3 signal (2.5 T vs. 1.5 T), indicating the cofactor still contains a 5-coordinate Mn ion, as seen in the preceding S-2 state. Magnetic double resonance data extend these findings revealing the electronic connectivity of the S-3' cofactor is similar to the high spin form of the preceding S-2 state, which contains a cuboidal Mn3O4Ca unit tethered to an external, 5-coordinate Mn ion (Mn-4). These results demonstrate that cofactor oxidation regulates water molecule insertion via binding to Mn-4. The interaction of ammonia with the cofactor is also discussed.
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| 3. |
- Krewald, Vera, et al.
(author)
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Metal oxidation states in biological water splitting
- 2015
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In: Chemical Science. - : Royal Society of Chemistry (RSC). - 2041-6520 .- 2041-6539. ; 6:3, s. 1676-1695
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Journal article (peer-reviewed)abstract
- A central question in biological water splitting concerns the oxidation states of the manganese ions that comprise the oxygen-evolving complex of photosystem II. Understanding the nature and order of oxidation events that occur during the catalytic cycle of five Si states (i = 0-4) is of fundamental importance both for the natural system and for artificial water oxidation catalysts. Despite the widespread adoption of the so-called "high-valent scheme"-where, for example, the Mn oxidation states in the S-2 state are assigned as III, IV, IV, IV-the competing "low-valent scheme" that differs by a total of two metal unpaired electrons (i.e. III, III, III, IV in the S-2 state) is favored by several recent studies for the biological catalyst. The question of the correct oxidation state assignment is addressed here by a detailed computational comparison of the two schemes using a common structural platform and theoretical approach. Models based on crystallographic constraints were constructed for all conceivable oxidation state assignments in the four (semi) stable S states of the oxygen evolving complex, sampling various protonation levels and patterns to ensure comprehensive coverage. The models are evaluated with respect to their geometric, energetic, electronic, and spectroscopic properties against available experimental EXAFS, XFEL-XRD, EPR, ENDOR and Mn K pre-edge XANES data. New 2.5 K Mn-55 ENDOR data of the S-2 state are also reported. Our results conclusively show that the entire S state phenomenology can only be accommodated within the high-valent scheme by adopting a single motif and protonation pattern that progresses smoothly from S-0 (III, III, III, IV) to S-3 (IV, IV, IV, IV), satisfying all experimental constraints and reproducing all observables. By contrast, it was impossible to construct a consistent cycle based on the low-valent scheme for all S states. Instead, the low-valent models developed here may provide new insight into the over-reduced S states and the states involved in the assembly of the catalytically active water oxidizing cluster.
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| 4. |
- Lundberg, Marcus, et al.
(author)
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Metal-ligand Covalency of Iron Complexes from High-Resolution Resonant Inelastic X-ray Scattering
- 2013
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In: Journal of the American Chemical Society. - Washington : American Chemical Society (ACS). - 0002-7863 .- 1520-5126. ; 135:45, s. 17121-17134
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Journal article (peer-reviewed)abstract
- Data from Kα resonant inelastic X-ray scattering (RIXS) have been used to extract electronic structure information, i.e., the covalency of metal–ligand bonds, for four iron complexes using an experimentally based theoretical model. Kα RIXS involves resonant 1s→3d excitation and detection of the 2p→1s (Kα) emission. This two-photon process reaches similar final states as single-photon L-edge (2p→3d) X-ray absorption spectroscopy (XAS), but involves only hard X-rays and can therefore be used to get high-resolution L-edge-like spectra for metal proteins, solution catalysts and their intermediates. To analyze the information content of Kα RIXS spectra, data have been collected for four characteristic σ-donor and π-back-donation complexes: ferrous tacn [FeII(tacn)2]Br2, ferrocyanide [FeII(CN)6]K4, ferric tacn [FeIII(tacn)2]Br3 and ferricyanide [FeIII(CN)6]K3. From these spectra metal–ligand covalencies can be extracted using a charge-transfer multiplet model, without previous information from the L-edge XAS experiment. A direct comparison of L-edge XAS and Kα RIXS spectra show that the latter reaches additional final states, e.g., when exciting into the eg (σ*) orbitals, and the splitting between final states of different symmetry provides an extra dimension that makes Kα RIXS a more sensitive probe of σ-bonding. Another key difference between L-edge XAS and Kα RIXS is the π-back-bonding features in ferro- and ferricyanide that are significantly more intense in L-edge XAS compared to Kα RIXS. This shows that two methods are complementary in assigning electronic structure. The Kα RIXS approach can thus be used as a stand-alone method, in combination with L-edge XAS for strongly covalent systems that are difficult to probe by UV/vis spectroscopy, or as an extension to conventional absorption spectroscopy for a wide range of transition metal enzymes and catalysts.
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| 5. |
- Maganas, Dimitrios, et al.
(author)
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Combined Experimental and ab initio Multi Reference Configuration Interaction study of the Resonant Inelastic X-RayScattering spectrum of CO2
- 2014
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In: The Journal of Physical Chemistry C. - : American Chemical Society (ACS). - 1932-7447 .- 1932-7455. ; 118:35, s. 20163-20175
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Journal article (peer-reviewed)abstract
- The fundamental problem of the symmetry breaking in the resonant inelastic X-ray scattering (RIXS) of the CO2 gas molecule is studied. The measurements were performed under catalytically relevant conditions within an in-house constructed reaction cell. The experimental RIXS plane is constructed from a sequence of resonances, covering the near-edge X-ray absorption fine structure (NEXAFS) spectrum up to 539 eV. The spectra show significant sensitivity with respect to the excitation frequency. The NEXAFS absorption spectrum, as well as the corresponding RIXS spectra, is interpreted with the aid of multireference configuration interaction (MRCI) theory. In this framework, the configuration interaction space spans the space of the intermediate and final states with single and single-double excitations. The dynamic character of the RIXS spectra is investigated by considering the electronic-nuclear vibrational coupling with the bending and antisymmetric stretching vibrations in the important intermediate excited states. In addition, the vibronic coupling mechanism involving the Renner-Teller effect and the core-hole localization pseudo-Jahn-Teller effect of the intermediate states is fully considered. The physical origin of the observed spectral features is discussed qualitatively and quantitatively in terms of individual core-to-valence excitations and valence-to-core decays, respectively. The computational protocol presented here, based on multireference wave function ab initio theory, serves as an important reference for future theoretical and experimental applications of RIXS spectroscopy.
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