| 1. |
- Pierella Karlusich, Juan José, et al.
(författare)
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Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods
- 2021
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 12:1
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Tidskriftsartikel (refereegranskat)abstract
- Nitrogen fixation has a critical role in marine primary production, yet our understanding of marine nitrogen-fixers (diazotrophs) is hindered by limited observations. Here, we report a quantitative image analysis pipeline combined with mapping of molecular markers for mining >2,000,000 images and >1300 metagenomes from surface, deep chlorophyll maximum and mesopelagic seawater samples across 6 size fractions (<0.2-2000m). We use this approach to characterise the diversity, abundance, biovolume and distribution of symbiotic, colony-forming and particle-associated diazotrophs at a global scale. We show that imaging and PCR-free molecular data are congruent. Sequence reads indicate diazotrophs are detected from the ultrasmall bacterioplankton (<0.2m) to mesoplankton (180-2000 mu m) communities, while images predict numerous symbiotic and colony-forming diazotrophs (>20 mu m). Using imaging and molecular data, we estimate that polyploidy can substantially affect gene abundances of symbiotic versus colony-forming diazotrophs. Our results support the canonical view that larger diazotrophs (>10 mu m) dominate the tropical belts, while unicellular cyanobacterial and non-cyanobacterial diazotrophs are globally distributed in surface and mesopelagic layers. We describe co-occurring diazotrophic lineages of different lifestyles and identify high-density regions of diazotrophs in the global ocean. Overall, we provide an update of marine diazotroph biogeographical diversity and present a new bioimaging-bioinformatic workflow. Nitrogen fixation by diazotrophs is critical for marine primary production. Using Tara Oceans datasets, this study combines a quantitative image analysis pipeline with metagenomic mining to provide an improved global overview of diazotroph abundance, diversity and distribution.
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| 2. |
- Englander, Robert, et al.
(författare)
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Coproducing health professions education : A prerequisite to coproducing health care services?
- 2020
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Ingår i: Academic Medicine. - : Wolters Kluwer. - 1040-2446 .- 1938-808X. ; 95:7, s. 1006-1016
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Tidskriftsartikel (refereegranskat)abstract
- In 2016, Batalden et al proposed a coproduction model for health care services. Starting from the argument that health care services should demonstrate service-dominant rather than goods-dominant logic, they argued that health care outcomes are the result of the intricate interaction of the provider and patient in concert with the system, community, and, ultimately, society. The key notion is that the patient is as much an expert in determining outcomes as the provider, but with different expertise. Patients come to the table with expertise in their lived experiences and the context of their lives.The authors posit that education, like health care services, should follow a service-dominant logic. Like the relationship between patients and providers, the relationship between learner and teacher requires the integrated expertise of each nested in the context of their system, community, and society to optimize outcomes. The authors then argue that health professions learners cannot be educated in a traditional, paternalistic model of education and then expected to practice in a manner that prioritizes coproductive partnerships with colleagues, patients, and families. They stress the necessity of adapting the health care services coproduction model to health professions education. Instead of asking whether the coproduction model is possible in the current system, they argue that the current system is not sustainable and not producing the desired kind of clinicians.A current example from a longitudinal integrated clerkship highlights some possibilities with coproduced education. Finally, the authors offer some practical ways to begin changing from the traditional model. They thus provide a conceptual framework and ideas for practical implementation to move the educational model closer to the coproduction health care services model that many strive for and, through that alignment, to set the stage for improved health outcomes for all.
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| 3. |
- Foster, James J., et al.
(författare)
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Light pollution forces a change in dung beetle orientation behavior
- 2021
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Ingår i: Current Biology. - : Elsevier BV. - 0960-9822 .- 1879-0445. ; 31:17, s. 3-3942
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Tidskriftsartikel (refereegranskat)abstract
- Increasing global light pollution1,2 threatens the night-time darkness to which most animals are adapted. Light pollution can have detrimental effects on behavior,3–5 including by disrupting the journeys of migratory birds,5,6 sand hoppers,7–9 and moths.10 This is particularly concerning, since many night-active species rely on compass information in the sky, including the moon,11,12 the skylight polarization pattern,13,14 and the stars,15 to hold their course. Even animals not directly exposed to streetlights and illuminated buildings may still experience indirect light pollution in the form of skyglow,3,4 which can extend far beyond urban areas.1,2 While some recent research used simulated light pollution to estimate how skyglow may affect orientation behavior,7–9 the consequences of authentic light pollution for celestial orientation have so far been neglected. Here, we present the results of behavioral experiments at light-polluted and dark-sky sites paired with photographic measurements of each environment. We find that light pollution obscures natural celestial cues and induces dramatic changes in dung beetle orientation behavior, forcing them to rely on bright earthbound beacons in place of their celestial compass. This change in behavior results in attraction toward artificial lights, thereby increasing inter-individual competition and reducing dispersal efficiency. For the many other species of insect, bird, and mammal that rely on the night sky for orientation and migration, these effects could dramatically hinder their vital night-time journeys.
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| 4. |
- Foster, Rachel A., et al.
(författare)
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Richelia
- 2022
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Ingår i: Bergey's Manual of Systematics of Archaea and Bacteria. - : John Wiley & Sons. - 9781118960608 ; , s. 1-17
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Bokkapitel (refereegranskat)abstract
- Ri.che'li.a. N.L. fem. n. Richelia, named for the Danish admiral Andreas du Plessis de Richelieu (1852–1932).Cyanobacteria / Cyanobacteria / Cyanobacteriales / Nostocaceae / RicheliaFilamentous heterocyst-forming, Gram-stain-negative, aerobic, phototrophic, N2-fixing, and occurring either as free-living or most often associated with several marine diatom genera (Rhizosolenia, Hemiaulus, and Chaetoceros). Filaments (trichomes) contain variable numbers of sheathless vegetative cells and one terminal heterocyst. Filaments lack akinetes and have limited motility via gliding. Gas vesicles are absent. Cyanophycin granules can be present in vegetative cells and heterocysts. Glycogen appears as large deposits, and thylakoids are dispersed randomly. Reproduce by normal cell division and asynchronous with one host diatom Rhizosolenia. DNA G + C content (mol%) from draft genomes varies 33–39%; genome size varies 3.42–6.04 Mb. Reduces atmospheric N2 with nitrogenase. Known habitats are warm (24–27.5°C), marine, and oligotrophic seas with intermediate (32 PSU) to fully marine (36 PSU) salinities. Biogeochemically relevant as N2 fixers and drivers of carbon export. Have been reported in all major ocean basins (Atlantic, Pacific, and Indian) and smaller seas (Mediterranean Sea and Red Sea).DNA G + C content (mol%): 33–39 (genome sequence).Type species: Richelia intracellularis Schmidt in Ostenfeld and Schmidt 1901.
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| 5. |
- Franzke, Myriam, et al.
(författare)
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Spatial orientation based on multiple visual cues in non-migratory monarch butterflies
- 2020
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Ingår i: The Journal of experimental biology. - : The Company of Biologists. - 1477-9145 .- 0022-0949. ; 223
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Tidskriftsartikel (refereegranskat)abstract
- Monarch butterflies (Danaus plexippus) are prominent for their annual long-distance migration from North America to their overwintering area in Central Mexico. To find their way on this long journey, they use a sun compass as their main orientation reference but will also adjust their migratory direction with respect to mountain ranges. This indicates that the migratory butterflies also attend to the panorama to guide their travels. Although the compass has been studied in detail in migrating butterflies, little is known about the orientation abilities of non-migrating butterflies. Here, we investigated whether non-migrating butterflies - which stay in a more restricted area to feed and breed - also use a similar compass system to guide their flights. Performing behavioral experiments on tethered flying butterflies in an indoor LED flight simulator, we found that the monarchs fly along straight tracks with respect to a simulated sun. When a panoramic skyline was presented as the only orientation cue, the butterflies maintained their flight direction only during short sequences, suggesting that they potentially use it for flight stabilization. We further found that when we presented the two cues together, the butterflies incorporate both cues in their compass. Taken together, we show here that non-migrating monarch butterflies can combine multiple visual cues for robust orientation, an ability that may also aid them during their migration.
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| 6. |
- Gutjahr, Marcus, et al.
(författare)
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Sub‐Permil Interlaboratory Consistency for Solution‐Based Boron Isotope Analyses on Marine Carbonates
- 2021
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Ingår i: Geostandards and Geoanalytical Research. - : John Wiley & Sons. - 1639-4488 .- 1751-908X. ; 45:1, s. 59-75
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Tidskriftsartikel (refereegranskat)abstract
- Boron isotopes in marine carbonates are increasingly used to reconstruct seawater pH and atmospheric pCO2 through Earth’s history. While isotope ratio measurements from individual laboratories are often of high quality, it is important that records generated in different laboratories can equally be compared. Within this Boron Isotope Intercomparison Project (BIIP), we characterised the boron isotopic composition (commonly expressed in δ11B) of two marine carbonates: Geological Survey of Japan carbonate reference materials JCp‐1 (coral Porites) and JCt‐1 (giant clam Tridacna gigas). Our study has three foci: (i) to assess the extent to which oxidative pre‐treatment, aimed at removing organic material from carbonate, can influence the resulting δ11B; (ii) to determine to what degree the chosen analytical approach may affect the resultant δ11B, and (iii) to provide well‐constrained consensus δ11B values for JCp‐1 and JCt‐1. The resultant robust mean and associated robust standard deviation (s*) for un‐oxidised JCp‐1 is 24.36 ± 0.45‰ (2s*), compared with 24.25 ± 0.22‰ (2s*) for the same oxidised material. For un‐oxidised JCt‐1, respective compositions are 16.39 ± 0.60‰ (2s*; un‐oxidised) and 16.24 ± 0.38‰ (2s*; oxidised). The consistency between laboratories is generally better if carbonate powders were oxidatively cleaned prior to purification and measurement.
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| 7. |
- Liu, William, et al.
(författare)
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Scientific challenges and instrumentation for the International Meridian Circle Program
- 2021
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Ingår i: Science China. Earth Sciences. - : Springer. - 1674-7313 .- 1869-1897. ; 64:12, s. 2090-2097
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Tidskriftsartikel (refereegranskat)abstract
- Earth’s ecosystems and human activities are threatened by a broad spectrum of hazards of major importance for the safety of ground infrastructures, space systems and space flight: solar activity, earthquakes, atmospheric and climatic disturbances, changes in the geomagnetic field, fluctuations of the global electric circuit. Monitoring and understanding these major hazards to better predict and mitigate their effects is one of the greatest scientific and operational challenges of the 21st century. Though diverse, these hazards share one feature in common: they all leave their characteristic imprints on a critical layer of the Earth’s environment: its ionosphere, middle and upper atmosphere (IMUA). The objective of the International Meridian Circle Program (IMCP), a major international program led by the Chines Academy of Sciences (CAS), is to deploy, integrate and operate a global network of research and monitoring instruments to use the IMUA as a screen on which to detect these imprints. In this article, we first show that the geometry required for the IMCP global observation system leads to a deployment of instruments in priority along the 120°E–60°W great meridian circle, which will cover in an optimal way both the dominant geographic and geomagnetic latitude variations, possibly complemented by a second Great Circle along the 30°E–150°W meridians to capture longitude variations. Then, starting from the Chinese Meridian Project (CMP) network and using it as a template, we give a preliminary and promising description of the instruments to be integrated and deployed along the 120°E–60° W great circle running across China, Australia and the Americas.
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| 8. |
- Markmann, James F., et al.
(författare)
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Phase 3 trial of human islet-after-kidney transplantation in type 1 diabetes
- 2021
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Ingår i: American Journal of Transplantation. - : John Wiley & Sons. - 1600-6135 .- 1600-6143. ; 21:4, s. 1477-1492
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Tidskriftsartikel (refereegranskat)abstract
- Allogeneic islet transplant offers a minimally invasive option for beta cell replacement in the treatment of type 1 diabetes (T1D). The CIT consortium trial of purified human pancreatic islets (PHPI) in patients with T1D after kidney transplant (CIT06), a National Institutes of Health-sponsored phase 3, prospective, open-label, single-arm pivotal trial of PHPI, was conducted in 24 patients with impaired awareness of hypoglycemia while receiving intensive insulin therapy. PHPI were manufactured using standardized processes. PHPI transplantation was effective with 62.5% of patients achieving the primary endpoint of freedom from severe hypoglycemic events and HbA(1c) <= 6.5% or reduced by >= 1 percentage point at 1 year posttransplant. Median HbA(1c)declined from 8.1% before to 6.0% at 1 year and 6.3% at 2 and 3 years following transplant (P < .001 for all vs baseline), with related improvements in hypoglycemia awareness and glucose variability. The improved metabolic control was associated with better health-related and diabetes-related quality of life. The procedure was safe and kidney allograft function remained stable after 3 years. These results add to evidence establishing allogeneic islet transplant as a safe and effective treatment for patients with T1D and unstable glucose control despite intensive insulin treatment, supporting the indication for PHPI in the post-renal transplant setting.
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