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- Hillier, Ladeana W, et al.
(författare)
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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
- 2004
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Ingår i: Nature. - 0028-0836 .- 1476-4687. ; 432:7018, s. 695-716
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Tidskriftsartikel (refereegranskat)abstract
- We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to have its genome sequenced, the draft sequence of its genome--composed of approximately one billion base pairs of sequence and an estimated 20,000-23,000 genes--provides a new perspective on vertebrate genome evolution, while also improving the annotation of mammalian genomes. For example, the evolutionary distance between chicken and human provides high specificity in detecting functional elements, both non-coding and coding. Notably, many conserved non-coding sequences are far from genes and cannot be assigned to defined functional classes. In coding regions the evolutionary dynamics of protein domains and orthologous groups illustrate processes that distinguish the lineages leading to birds and mammals. The distinctive properties of avian microchromosomes, together with the inferred patterns of conserved synteny, provide additional insights into vertebrate chromosome architecture.
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- Vukusic, J., et al.
(författare)
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MOVPE-grown GaInNAsVCSELs at 1.3 mu m with conventional mirror design approach
- 2003
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Ingår i: Electronics Letters. - : Institution of Engineering and Technology (IET). - 0013-5194 .- 1350-911X. ; 39:8, s. 662-664
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Tidskriftsartikel (refereegranskat)abstract
- 1.3 mum oxide confined GaInNAs VCSELs designed using the same design philosophy used for standard 850 nm VCSELs is presented. The VCSELs have doped mirrors, with graded and highly doped interfaces, and are fabricated using production-friendly procedures. Multimode VCSELs (I I mum oxide aperture) with an emission wavelength of 1287 nm have a threshold current of 3 mA and produce I mW of output power at 20degreesC. The maximum operating temperature is 95degreesC. Emission at 1303 nm with I mW of output power and a threshold current of 7 mA has been observed from VCSELs with a larger detuning between the gain peak and the cavity resonance.
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- Yee, CS, et al.
(författare)
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EULAR randomised controlled trial of pulse cyclophosphamide and methylprednisolone versus continuous cyclophosphamide and prednisolone followed by azathioprine and prednisolone in lupus nephritis
- 2004
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Ingår i: Annals of the Rheumatic Diseases. - : BMJ. - 1468-2060 .- 0003-4967. ; 63:5, s. 525-529
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Tidskriftsartikel (refereegranskat)abstract
- Objective: To compare the efficacy and side effects of intermittent pulse cyclophosphamide plus methylprednisolone with continuous oral cyclophosphamide plus prednisolone, followed by azathioprine, in patients with proliferative glomerulonephritis caused by systemic lupus erythematosus (SLE). Methods: A multicentre randomised controlled trial was conducted between June 1992 and May 1996 involving eight European centres. All patients satisfied the American College of Rheumatology criteria for SLE and had biopsy proven proliferative lupus nephritis. All received corticosteroids in addition to cytotoxic drugs, as defined in the protocol, for two years. The trial was terminated after four years as recruitment was disappointing. Results: 32 SLE patients with lupus nephritis were recruited: 16 were randomised to intermittent pulse cyclophosphamide and 16 to continuous cyclophosphamide plus azathioprine. Mean duration of follow up was 3.7 years in the continuous group (range 0 to 5.6) and 3.3 years in the pulse group ( range 0.25 to 6). Three patients were excluded from the pulse therapy group as they were later found to have pure mesangial glomerulonephritis. Two patients in the continuous therapy group developed end stage renal failure requiring dialysis, but none in the intermittent pulse therapy (p = 0.488; NS). There were similar numbers of side effects and withdrawals from treatment in both groups. There were three deaths: two in the intermittent pulse therapy group and one in the continuous therapy group. Conclusions: There was no statistically significant difference in efficacy and side effects between the two regimens. Infectious complications occurred commonly, so careful monitoring is required during treatment.
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| 7. |
- Campieri, M, et al.
(författare)
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Session II and III panel discussion
- 2000
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Ingår i: DRUGS OF TODAY. - 1699-3993. ; 36, s. 93-101
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
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| 8. |
- Griffiths, B S, et al.
(författare)
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Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions: an examination of the biodiversity-ecosystem function relationship
- 2000
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Ingår i: Oikos. - : Wiley. - 1600-0706 .- 0030-1299. ; 90:2, s. 279-294
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Tidskriftsartikel (refereegranskat)abstract
- A technique based on progressive fumigation was used to reduce soil microbial biodiversity, and the effects of such reductions upon the stability of key soil processes were measured. Mineral soil samples from a grassland were fumigated with chloroform for up to 24 h and then incubated for 5 months to allow recolonisation by surviving organisms. The diversity of cultivable and non-cultivable bacteria, protozoa and nematodes was progressively reduced by increasing fumigation times, as was the number of trophic groups, phyla within trophic groups, and taxa within phyla. Total microbial biomass was similar within fumigated soils, but lower than for unfumigated soil. There was no direct relationship between biodiversity and function. Some broad-scale functional parameters increased as biodiversity decreased, e.g. thymidine incorporation, growth on added nutrients, and the decomposition rate of plant residues. Other more specific parameters decreased as biodiversity decreased, e.g. nitrification, denitrification and methane oxidation. Thus specific Functional parameters may be a more sensitive indicator of environmental change than general parameters. Although fumigation reduced soil microbial biodiversity, there was evidence to suggest that it selected for organisms with particular physiological characteristics. The consequences of this for interpreting biodiversity - function relationships are discussed. The stability of the resulting communities to perturbation was further examined by imposing a transient (brief healing to 40 degrees C) or a persistent (addition of CuSO4) stress. Decomposition of grass residues was determined on three occasions after such perturbations. The soils clearly demonstrated resilience to the transient stress; decomposition rates were initially depressed by the stress and recovered over time. Resilience was reduced in the soils with decreasing biodiversity. Soils were not resilient to the persistent stress, there was no recovery in decomposition rate over time, but the soils with the highest biodiversity were more resistant to the stress than soils with impaired biodiversity. The study of functional stability under applied perturbation is a powerful means of examining the effects of biodiversity.
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- Griffiths, P. C., et al.
(författare)
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Small-angle neutron scattering, electron paramagnetic resonance, electrophoretic NMR, and time-resolved fluorescence quenching studies of sodium dodecyl sulfate and tetra(ethylene oxide) dodecyl ether mixed surfactant micelles
- 2004
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Ingår i: Journal of Physical Chemistry B. - : American Chemical Society (ACS). - 1520-6106 .- 1520-5207. ; 108:4, s. 1351-1356
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Tidskriftsartikel (refereegranskat)abstract
- Small-angle neutron scattering (SANS), time-resolved fluorescence quenching (TRFQ), electrophoretic NMR (ENMR), and electron paramagnetic resonance (EPR) have been used to study mixed micelles formed from the two dodecyl tailed surfactants, sodium dodecyl sulfate (SDS) and tetra(ethylene oxide) dodecyl ether. By combining the TRFQ and EPR techniques, one is essentially able to calculate the SANS data, lending significant weight to the micelle characteristics thus obtained. EPR reports the degree of hydration of the surfactant headgroups; TRFQ, the micelle aggregation number and inter alia the volume of the hydrophobic core. Given the physical dimensions of the surfactant, i.e., alkyl chain length, headgroup volumes, etc., it is then possible to calculate the micelle ellipticity and shell thickness. The ENMR studies provide a rather different but complementary estimate of the ionic character of the micelle. With increasing nonionic content, the aggregation number increases, the micelle becomes more elliptical, and the headgroup region of the micelle becomes less hydrated and significantly more viscous. The degree of sodium counterion dissociation shows an initial small decrease with decreasing SDS micelle mole fraction but subsequently increases, reflecting the interplay between the electrostatic character of the micelle surface and the micelle curvature.
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| 12. |
- Griffiths, P., et al.
(författare)
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NMR self-diffusion studies of polymeric surfactants
- 2002
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Ingår i: Current Opinion in Colloid & Interface Science. - 1359-0294 .- 1879-0399. ; 7:04-mar, s. 249-252
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Forskningsöversikt (refereegranskat)abstract
- The ability to visualise and quantify the mobility of particular components in multi-component solutions has had a profound impact on colloid science because the mobility of the species under investigation is determined not only by its chemical structure and size, but also by the physical environment in which it is located. These considerations are of course central to medical imaging (MRI) [1] and the MRI community has greatly benefited from the 'colloidal pioneers'. Thus, measurement and analysis of self-diffusion coefficients using the pulsed-gradient spin-echo nuclear magnetic resonance technique (PGSE-NMR, sometimes referred to as PFG-NMR) permits a non-perturbing in-situ probing of complex structure. This is especially true for colloid science since the characteristic structural dimensions are comparable to the displacements on the NMR timescale.
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| 15. |
- Jonsson, AP, et al.
(författare)
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A novel Ser O-glucuronidation in acidic proline-rich proteins identified by tandem mass spectrometry.
- 2000
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Ingår i: FEBS Letters. - : Wiley. - 0014-5793 .- 1873-3468. ; 475:2, s. 131-4
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Tidskriftsartikel (refereegranskat)abstract
- Human acidic proline-rich salivary protein PRP-1 and its C-terminally truncated form PRP-3 were analyzed by electrospray tandem mass spectrometry. Post-translational modifications were detected and characterized. A pyroglutamic acid residue was demonstrated at the N-terminus, Ser-8 and Ser-22 were shown to be phosphorylated and an O-linked glucuronic acid conjugation was identified. The latter modification was located to Ser-17 and found to be present in approximately 40% of the polypeptides.
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