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| 2. |
- Degerman, Johan, et al.
(författare)
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Modeling stem cell migration by Hidden Markov
- 2004
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Ingår i: Proceedings of the Swedish Symposium on Image Analysis, SSBA 2004. ; , s. 122-125
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Konferensbidrag (övrigt vetenskapligt/konstnärligt)
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| 3. |
- Hagberg, Jessika
(författare)
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Capillary zone electrophoresis for the analysis of low molecular weight organic acids in environmental systems
- 2003
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Doktorsavhandling (övrigt vetenskapligt/konstnärligt)abstract
- Capillary zone electrophoretic (CZE) methods were developed to identify and quantify low molecular weight (LMW) organic acids in environmental samples. Sensitivity and selectivity were optimised by adapting the background electrolyte to the characteristics of analytes, and by using different modes of detection and injection. Electrokinetic injection mode in combination with an isotachophoretic state increased the sensitivity remarkably for LMW organic acids using UV detection. Calcium ions were added to the background electrolyte, inducing an on-column complexation between acids and calcium ions, which gave good separation of the acids. Mass spectrometric detection (compared to UV detection) increased the sensitivity when using hydrodynamic injection mode during analysis, and selectivity was improved by mass identification. A CZE method for determination of the dissociation constants of LMW organic acids in the pKa range of 3.54.5 was also developed. The developed procedures were applied to different areas where LMW organic acids play an important environmental role: Low molecular weight organic acids were analysed in rainwater and soil water in the low μg/l range, within ten minutes after sampling. Rapid analysis and high sensitivity are essential when studying samples with rapid turnover due to microbial activity and photodegradation. The use of CZE-ESI-MS proved to be a robust analytical tool for determining LMW organic acids in samples rich in interfering ions. Organic acids excreted by soil fungi as response to metal exposure was easily and rapidly quantified with CZE-ESI-MS compared to HPLC and CZE-UV analysis. Dissociation constants for isosaccharinic acid (ISA) and gluconic acid were determined by CZE to 3.87 and 3.64, respectively. The ability to make the determinations in the presence of impurities as well as not having to know the exact concentration of analyte were identified as the major benefits of CZE. Isosaccharinic acid was identified as the main degradation product from alkaline degradation of cellulose by CZE analysis. Long-term predictions on both cellulose degradation and ISA production were made based on three years of sampling data. A control sampling after seven years indicated that the degradation of cellulose and the production of ISA were lower than predicted.
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| 4. |
- Karlsson, Patrick
(författare)
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A simple and possibly efficient approach to Automatic License Plate Recognition
- 2002
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Ingår i: Proceedings SSAB'02. - 9163121859 ; , s. 185-
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Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- This paper addresses the problems associated with automatically detecting and reading license plates in a set of images. After a structural analysis of the problem, together with the formulation of a relaxed approach, a simple and possibly efficient solution is applied to images with license plates from the United Arab Emirates, and part of yhe system is also applied to images containing Swedish license plates.
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| 7. |
- Karlsson, Patrick, et al.
(författare)
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Segmentation of point-like fluorescent markers
- 2004
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Ingår i: Proceedings. ; , s. 146-149
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Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- We present a method for accurate segmentation of point like signals, from fluorescent markers in digital microscopic images with subcellular resolution. The method is able to segment and separate clustered signals, which facilitates accurate dot counting. The method performance is evaluated using synthetic images, that are modeled after real digital microscopy images of cells. The results show that the method is able to detect point like fluorescent signals as correct as a manual operator.
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| 10. |
- Schloot, N, et al.
(författare)
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Comparison of cytokine ELISpot assay formats for the detection of islet antigen autoreactive T cells : Report of the third immunology of diabetes society T-cell workshop
- 2003
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Ingår i: Journal of Autoimmunity. - 0896-8411 .- 1095-9157. ; 21:4, s. 365-376
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Tidskriftsartikel (refereegranskat)abstract
- The identification of sensitive assay formats capable of distinguishing islet autoreactive T cells directly ex vivo in blood is a major goal in type 1 diabetes research. Recently, much interest has been shown in the cytokine enzyme linked immunospot assay (CK ELISpot), an assay potentially capable of fulfilling these difficult criteria. To address the utility of this assay in detecting autoreactive T cells, a 'wet' workshop was organized using the same fresh blood sample and coded antigens. Five different laboratories participated, using three distinct CK ELISpot assay formats. Samples from two subjects were pre-tested for responses to sub-optimal concentrations of tetanus toxoid, representing a low frequency recall response, and peptides from diabetes associated autoantigens GAD65, IA-2 and HSP60. All participants measured interferon-? production and combinations of interleukins-4, -5, -10 and -13. In the workshop 4 of 5 laboratories detected low frequency recall responses in both subjects and 3 of 5 detected at least one of the autoreactive peptide responses concordant with pre-testing. Significant assay format related differences in sensitivity and signal-to-noise ratio were observed. The results demonstrate the potential for detection of low-level autoreactive T cell responses and identify assay characteristics that will be useful for studies in type 1 diabetes. ⌐ 2003 Elsevier Ltd. All rights reserved.
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| 13. |
- Zingmark, Per-Henrik, et al.
(författare)
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Population pharmacokinetics of clomethiazole and its effect on the natural course of sedation in acute stroke patients
- 2003
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Ingår i: British Journal of Clinical Pharmacology. - : Wiley. - 0306-5251 .- 1365-2125. ; 56:2, s. 173-183
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Tidskriftsartikel (refereegranskat)abstract
- AIMS: This analysis was performed to investigate the population pharmacokinetics of clomethiazole and its effect on the natural course of sedation in acute stroke patients using a nonlinear mixed effects modelling approach. METHODS: One thousand five hundred and forty-six acute stroke patients (774 on active treatment) from 166 centres were included in three randomized, double-blind, placebo-controlled phase III efficacy and safety studies. A total dose of 68 mg kg(-1) clomethiazole edisilate was given as a three-phase i.v.-infusion over 24 h. Three blood samples were drawn from all patients to characterize the pharmacokinetics. Sedation was monitored throughout the entire treatment period and the degree of sedation was measured on a discrete ordinal scale with six levels. Models were fitted to the data using the software NONMEM. RESULTS: Clomethiazole was characterized by a two-compartment pharmacokinetic model with interindividual variability in all structural parameters. For a patient weighing 75 kg, the average CL, V1, Q, and V2 was estimated to be 52.7 l h(-1), 82.5 l, 167 l h(-1) and 335 l, respectively. The interindividual variability in CL, V1, Q and V2 was estimated to be 48%, 53%, 42% and 54%, respectively. Increasing body weight and concomitant administration of liver enzyme inducing drugs were found to increase clearance (by 0.5 l h(-1) kg(-1) and 40%, respectively). Increasing weight also increased the volume of distribution (1.1 l kg(-1) for V1 and 4.7 l kg(-1) for V2). A six-category proportional odds model with a component including the natural course of sedation following placebo administration, a drug component (present or absent) and an interindividual variability component described the degree of sedation. Stroke severity as measured on the NIH-stroke scale on admission and drug treatment were the most important predictors of sedation, but a nonlinear increase in sedation with increasing age was also found. Increasing body weight increased the sedative drug effect. CONCLUSIONS: The pharmacokinetics of clomethiazole were characterized in acute stroke patients and the analysis excluded several possible covariates of interest in drug development. The time course of sedation could be quantitatively described during the first 24 h following an acute stroke in the presence or absence of clomethiazole treatment.
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