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1.
  • Schael, S., et al. (författare)
  • Electroweak measurements in electron positron collisions at W-boson-pair energies at LEP
  • 2013
  • Ingår i: Physics Reports. - : Elsevier BV. - 0370-1573 .- 1873-6270. ; 532:4, s. 119-244
  • Forskningsöversikt (refereegranskat)abstract
    • Electroweak measurements performed with data taken at the electron positron collider LEP at CERN from 1995 to 2000 are reported. The combined data set considered in this report corresponds to a total luminosity of about 3 fb(-1) collected by the four LEP experiments ALEPH, DELPHI, 13 and OPAL, at centre-of-mass energies ranging from 130 GeV to 209 GeV. Combining the published results of the four LEP experiments, the measurements include total and differential cross-sections in photon-pair, fermion-pair and four-fermion production, the latter resulting from both double-resonant WW and ZZ production as well as singly resonant production. Total and differential cross-sections are measured precisely, providing a stringent test of the Standard Model at centre-of-mass energies never explored before in electron positron collisions. Final-state interaction effects in four-fermion production, such as those arising from colour reconnection and Bose Einstein correlations between the two W decay systems arising in WW production, are searched for and upper limits on the strength of possible effects are obtained. The data are used to determine fundamental properties of the W boson and the electroweak theory. Among others, the mass and width of the W boson, m(w) and Gamma(w), the branching fraction of W decays to hadrons, B(W -> had), and the trilinear gauge-boson self-couplings g(1)(Z), K-gamma and lambda(gamma), are determined to be: m(w) = 80.376 +/- 0.033 GeV Gamma(w) = 2.195 +/- 0.083 GeV B(W -> had) = 67.41 +/- 0.27% g(1)(Z) = 0.984(-0.020)(+0.018) K-gamma - 0.982 +/- 0.042 lambda(gamma) = 0.022 +/- 0.019. (C) 2013 Elsevier B.V. All rights reserved.
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2.
  • Acharya, B. S., et al. (författare)
  • Introducing the CTA concept
  • 2013
  • Ingår i: Astroparticle physics. - : Elsevier BV. - 0927-6505 .- 1873-2852. ; 43, s. 3-18
  • Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)abstract
    • The Cherenkov Telescope Array (CTA) is a new observatory for very high-energy (VHE) gamma rays. CTA has ambitions science goals, for which it is necessary to achieve full-sky coverage, to improve the sensitivity by about an order of magnitude, to span about four decades of energy, from a few tens of GeV to above 100 TeV with enhanced angular and energy resolutions over existing VHE gamma-ray observatories. An international collaboration has formed with more than 1000 members from 27 countries in Europe, Asia, Africa and North and South America. In 2010 the CTA Consortium completed a Design Study and started a three-year Preparatory Phase which leads to production readiness of CTA in 2014. In this paper we introduce the science goals and the concept of CTA, and provide an overview of the project. (C) 2013 Elsevier B.V. All rights reserved.
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3.
  • Actis, M., et al. (författare)
  • Design concepts for the Cherenkov Telescope Array CTA : an advanced facility for ground-based high-energy gamma-ray astronomy
  • 2011
  • Ingår i: Experimental astronomy. - : Springer. - 0922-6435 .- 1572-9508. ; 32:3, s. 193-316
  • Tidskriftsartikel (refereegranskat)abstract
    • Ground-based gamma-ray astronomy has had a major breakthrough with the impressive results obtained using systems of imaging atmospheric Cherenkov telescopes. Ground-based gamma-ray astronomy has a huge potential in astrophysics, particle physics and cosmology. CTA is an international initiative to build the next generation instrument, with a factor of 5-10 improvement in sensitivity in the 100 GeV-10 TeV range and the extension to energies well below 100 GeV and above 100 TeV. CTA will consist of two arrays (one in the north, one in the south) for full sky coverage and will be operated as open observatory. The design of CTA is based on currently available technology. This document reports on the status and presents the major design concepts of CTA.
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4.
  • Abel, I, et al. (författare)
  • Overview of the JET results with the ITER-like wall
  • 2013
  • Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 53:10, s. 104002-
  • Tidskriftsartikel (refereegranskat)abstract
    • Following the completion in May 2011 of the shutdown for the installation of the beryllium wall and the tungsten divertor, the first set of JET campaigns have addressed the investigation of the retention properties and the development of operational scenarios with the new plasma-facing materials. The large reduction in the carbon content (more than a factor ten) led to a much lower Z(eff) (1.2-1.4) during L- and H-mode plasmas, and radiation during the burn-through phase of the plasma initiation with the consequence that breakdown failures are almost absent. Gas balance experiments have shown that the fuel retention rate with the new wall is substantially reduced with respect to the C wall. The re-establishment of the baseline H-mode and hybrid scenarios compatible with the new wall has required an optimization of the control of metallic impurity sources and heat loads. Stable type-I ELMy H-mode regimes with H-98,H-y2 close to 1 and beta(N) similar to 1.6 have been achieved using gas injection. ELM frequency is a key factor for the control of the metallic impurity accumulation. Pedestal temperatures tend to be lower with the new wall, leading to reduced confinement, but nitrogen seeding restores high pedestal temperatures and confinement. Compared with the carbon wall, major disruptions with the new wall show a lower radiated power and a slower current quench. The higher heat loads on Be wall plasma-facing components due to lower radiation made the routine use of massive gas injection for disruption mitigation essential.
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5.
  • Romanelli, F, et al. (författare)
  • Overview of the JET results
  • 2011
  • Ingår i: Nuclear Fusion. - : IOP Publishing. - 1741-4326 .- 0029-5515. ; 51:9
  • Tidskriftsartikel (refereegranskat)abstract
    • Since the last IAEA Conference JET has been in operation for one year with a programmatic focus on the qualification of ITER operating scenarios, the consolidation of ITER design choices and preparation for plasma operation with the ITER-like wall presently being installed in JET. Good progress has been achieved, including stationary ELMy H-mode operation at 4.5 MA. The high confinement hybrid scenario has been extended to high triangularity, lower ρ*and to pulse lengths comparable to the resistive time. The steady-state scenario has also been extended to lower ρ*and ν*and optimized to simultaneously achieve, under stationary conditions, ITER-like values of all other relevant normalized parameters. A dedicated helium campaign has allowed key aspects of plasma control and H-mode operation for the ITER non-activated phase to be evaluated. Effective sawtooth control by fast ions has been demonstrated with3He minority ICRH, a scenario with negligible minority current drive. Edge localized mode (ELM) control studies using external n = 1 and n = 2 perturbation fields have found a resonance effect in ELM frequency for specific q95values. Complete ELM suppression has, however, not been observed, even with an edge Chirikov parameter larger than 1. Pellet ELM pacing has been demonstrated and the minimum pellet size needed to trigger an ELM has been estimated. For both natural and mitigated ELMs a broadening of the divertor ELM-wetted area with increasing ELM size has been found. In disruption studies with massive gas injection up to 50% of the thermal energy could be radiated before, and 20% during, the thermal quench. Halo currents could be reduced by 60% and, using argon/deuterium and neon/deuterium gas mixtures, runaway electron generation could be avoided. Most objectives of the ITER-like ICRH antenna have been demonstrated; matching with closely packed straps, ELM resilience, scattering matrix arc detection and operation at high power density (6.2 MW m-2) and antenna strap voltages (42 kV). Coupling measurements are in very good agreement with TOPICA modelling. © 2011 IAEA, Vienna.
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6.
  • Klionsky, Daniel J., et al. (författare)
  • Guidelines for the use and interpretation of assays for monitoring autophagy
  • 2012
  • Ingår i: Autophagy. - : Informa UK Limited. - 1554-8635 .- 1554-8627. ; 8:4, s. 445-544
  • Forskningsöversikt (refereegranskat)abstract
    • In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
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7.
  • Spracklen, D. V., et al. (författare)
  • Explaining global surface aerosol number concentrations in terms of primary emissions and particle formation
  • 2010
  • Ingår i: Atmospheric Chemistry And Physics. - : Copernicus GmbH. - 1680-7316 .- 1680-7324. ; 10:10, s. 4775-4793
  • Tidskriftsartikel (refereegranskat)abstract
    • We synthesised observations of total particle number (CN) concentration from 36 sites around the world. We found that annual mean CN concentrations are typically 300-2000 cm(-3) in the marine boundary layer and free troposphere (FT) and 1000-10 000 cm(-3) in the continental boundary layer (BL). Many sites exhibit pronounced seasonality with summer time concentrations a factor of 2-10 greater than wintertime concentrations. We used these CN observations to evaluate primary and secondary sources of particle number in a global aerosol microphysics model. We found that emissions of primary particles can reasonably reproduce the spatial pattern of observed CN concentration (R-2=0.46) but fail to explain the observed seasonal cycle (R-2=0.1). The modeled CN concentration in the FT was biased low (normalised mean bias, NMB=-88%) unless a secondary source of particles was included, for example from binary homogeneous nucleation of sulfuric acid and water (NMB=-25%). Simulated CN concentrations in the continental BL were also biased low (NMB=-74%) unless the number emission of anthropogenic primary particles was increased or a mechanism that results in particle formation in the BL was included. We ran a number of simulations where we included an empirical BL nucleation mechanism either using the activation-type mechanism (nucleation rate, J, proportional to gas-phase sulfuric acid concentration to the power one) or kinetic-type mechanism (J proportional to sulfuric acid to the power two) with a range of nucleation coefficients. We found that the seasonal CN cycle observed at continental BL sites was better simulated by BL particle formation (R-2=0.3) than by increasing the number emission from primary anthropogenic sources (R-2=0.18). The nucleation constants that resulted in best overall match between model and observed CN concentrations were consistent with values derived in previous studies from detailed case studies at individual sites. In our model, kinetic and activation-type nucleation parameterizations gave similar agreement with observed monthly mean CN concentrations.
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8.
  • Majounie, Elisa, et al. (författare)
  • Frequency of the C9orf72 hexanucleotide repeat expansion in patients with amyotrophic lateral sclerosis and frontotemporal dementia: a cross-sectional study
  • 2012
  • Ingår i: Lancet Neurology. - 1474-4465. ; 11:4, s. 323-330
  • Tidskriftsartikel (refereegranskat)abstract
    • Background We aimed to accurately estimate the frequency of a hexanucleotide repeat expansion in C9orf72 that has been associated with a large proportion of cases of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). Methods We screened 4448 patients diagnosed with ALS (El Escorial criteria) and 1425 patients with FTD (Lund-Manchester criteria) from 17 regions worldwide for the GGGGCC hexanucleotide expansion using a repeat-primed PCR assay. We assessed familial disease status on the basis of self-reported family history of similar neurodegenerative diseases at the time of sample collection. We compared haplotype data for 262 patients carrying the expansion with the known Finnish founder risk haplotype across the chromosomal locus. We calculated age-related penetrance using the Kaplan-Meier method with data for 603 individuals with the expansion. Findings In patients with sporadic ALS, we identified the repeat expansion in 236 (7.0%) of 3377 white individuals from the USA, Europe, and Australia, two (4.1%) of 49 black individuals from the USA, and six (8.3%) of 72 Hispanic individuals from the USA. The mutation was present in 217 (39.3%) of 552 white individuals with familial MS from Europe and the USA. 59 (6.0%) of 981 white Europeans with sporadic FTD had the mutation, as did 99 (24.8%) of 400 white Europeans with familial FTD. Data for other ethnic groups were sparse, but we identified one Asian patient with familial ALS (from 20 assessed) and two with familial FTD (from three assessed) who carried the mutation. The mutation was not carried by the three Native Americans or 360 patients from Asia or the Pacific Islands with sporadic MS who were tested, or by 41 Asian patients with sporadic FTD. All patients with the repeat expansion had (partly or fully) the founder haplotype, suggesting a one-off expansion occurring about 1500 years ago. The pathogenic expansion was non-penetrant in individuals younger than 35 years, 50% penetrant by 58 years, and almost fully penetrant by 80 years. Interpretation A common Mendelian genetic lesion in C9472 is implicated in many cases of sporadic and familial ALS and FTD. Testing for this pathogenic expansion should be considered in the management and genetic counselling of patients with these fatal neurodegenerative diseases.
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9.
  • Pearson, Emma J., et al. (författare)
  • A lacustrine GDGT-temperature calibration from the Scandinavian Arctic to Antarctic : Renewed potential for the application of GDGT-paleothermometry in lakes
  • 2011
  • Ingår i: Geochimica et Cosmochimica Acta. - Oxford : Elsevier BV. - 0016-7037 .- 1872-9533. ; 75:20, s. 6225-6238
  • Tidskriftsartikel (refereegranskat)abstract
    • Quantitative climate reconstructions are fundamental to understand long-term trends in natural climate variability and to test climate models used to predict future climate change. Recent advances in molecular geochemistry have led to calibrations using glycerol dialkyl glycerol tetraethers (GDGTs), a group of temperature-sensitive membrane lipids found in Archaea and bacteria. GDGTs have been used to construct temperature indices for oceans (TEX(86) index) and soils (MBT/CBT index). The aim of this study is to examine GDGT-temperature relationships and assess the potential of constructing a GDGT-based palaeo-thermometer for lakes. We examine GDGT-temperature relationships using core top sediments from 90 lakes across a north-south transect from the Scandinavian Arctic to Antarctica including sites from Finland, Sweden, Siberia, the UK, Austria, Turkey, Ethiopia, Uganda, Chile, South Georgia and the Antarctic Peninsula. We examine a suite of 15 GDGTs, including compounds used in the TEX(86) and MBT/CBT indices and reflecting the broad range of GDGT inputs to small lake systems. GDGTs are present in varying proportions in all lakes examined. The TEX(86) index is not applicable to our sites because of the large relative proportions of soil derived and methanogenic components. Similarly, the MBT/CBT index is also not applicable and predicts temperatures considerably lower than those measured. We examine relationships between individual GDGT compounds and temperature, pH, conductivity and water depth. Temperature accounts for a large and statistically independent fraction of variation in branched GDGT composition. We propose a GDGT-temperature regression model with high accuracy and precision (R(2) = 0.88; RMSE = 2.0 degrees C; RMSEP = 2.1 degrees C) for use in lakes based on a subset of branched GDGT compounds and highlight the potential of this new method for reconstructing past temperatures using lake sediments. (C) 2011 Elsevier Ltd. All rights reserved.
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10.
  • Schouten, Stefan, et al. (författare)
  • An interlaboratory study of TEX86 and BIT analysis of sediments, extracts, and standard mixtures
  • 2013
  • Ingår i: Geochemistry Geophysics Geosystems. - 1525-2027. ; 14:12, s. 5263-5285
  • Tidskriftsartikel (refereegranskat)abstract
    • Two commonly used proxies based on the distribution of glycerol dialkyl glycerol tetraethers (GDGTs) are the TEX86 (TetraEther indeX of 86 carbon atoms) paleothermometer for sea surface temperature reconstructions and the BIT (Branched Isoprenoid Tetraether) index for reconstructing soil organic matter input to the ocean. An initial round-robin study of two sediment extracts, in which 15 laboratories participated, showed relatively consistent TEX86 values (reproducibility +/- 3-4 degrees C when translated to temperature) but a large spread in BIT measurements (reproducibility +/- 0.41 on a scale of 0-1). Here we report results of a second round-robin study with 35 laboratories in which three sediments, one sediment extract, and two mixtures of pure, isolated GDGTs were analyzed. The results for TEX86 and BIT index showed improvement compared to the previous round-robin study. The reproducibility, indicating interlaboratory variation, of TEX86 values ranged from 1.3 to 3.0 degrees C when translated to temperature. These results are similar to those of other temperature proxies used in paleoceanography. Comparison of the results obtained from one of the three sediments showed that TEX86 and BIT indices are not significantly affected by interlaboratory differences in sediment extraction techniques. BIT values of the sediments and extracts were at the extremes of the index with values close to 0 or 1, and showed good reproducibility (ranging from 0.013 to 0.042). However, the measured BIT values for the two GDGT mixtures, with known molar ratios of crenarchaeol and branched GDGTs, had intermediate BIT values and showed poor reproducibility and a large overestimation of the true (i.e., molar-based) BIT index. The latter is likely due to, among other factors, the higher mass spectrometric response of branched GDGTs compared to crenarchaeol, which also varies among mass spectrometers. Correction for this different mass spectrometric response showed a considerable improvement in the reproducibility of BIT index measurements among laboratories, as well as a substantially improved estimation of molar-based BIT values. This suggests that standard mixtures should be used in order to obtain consistent, and molar-based, BIT values.
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11.
  • Aftabi, Pedram, et al. (författare)
  • InSAR mapping and modelling of an active Iranian salt extrusion
  • 2010
  • Ingår i: Journal of the Geological Society. - : Geological Society of London. - 0016-7649 .- 2041-479X. ; 167:1, s. 155-170
  • Tidskriftsartikel (refereegranskat)abstract
    • Interferometric synthetic aperture radar (InSAR) imaging is a powerful technique that is increasingly used to extract detailed 3D information on Earth surface structures, including exposed diapiric surfaces. We have used InSAR to map, for the first time, the cumulative surface deformation in a 6 km × 3 6 km region surrounding an active salt diapir (Syahoo) and its associated surface salt flow (or namakier) exposed in the Zagros Mountains of southern Iran. Images provided by the European Space Agency were acquired in 12 increments (ranging in length between 35 and 1248 days) over a 14 year interval between July 1992 and May 2006. The deformation of the salt surface is non-steady, with (extrapolated) rates of displacement varying between surficial uplifts of +1.4 mm day-1 (+511 mm a-1) and subsidence of -2.2 mm day-1 (-803 mm a-1). Growth of a central topographic dome occurs following short wet intervals to create a salt fountain morphology, which then slowly decays during the intervening long dry periods. Salt associated with dynamic 'bulging' of the central dome during wet intervals may flow laterally via gravity spreading into the surrounding salt sheet, resulting in deflation and subsidence of the dome, which is counteracted by growth and inflation of the adjacent namakiers. Salt 'bulges' that migrate down the namakier, resulting in local inflationary and deflationary cycles of the surface, may be regarded as episodic pulses of gravity spreading. Areas of inflation and deflation are also observed to commonly reverse during dry to wet periods, as the overall salt system effectively self regulates as it continually strives for dynamic equilibrium. As long as the source of salt remains undepleted, gravity spreading of the dome ultimately results in more buoyancy-driven salt flowing up the diapiric neck to replenish and feed the extrusion and maintain the gross fountain morphology.
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12.
  • Baikpour, S., et al. (författare)
  • The Garmsar salt nappe and seasonal inversions of surrounding faults imaged by SAR interferometry, Northern Iran
  • 2012
  • Ingår i: Geological Society of London, Special Publications. ; 363, s. 563-578
  • Tidskriftsartikel (refereegranskat)abstract
    • The allochthonous Tertiary salt of the Garmsar salt nappe extruded from where the most southerly point of the Alborz Mountain front is offset by the Zirab–Garmsar strike-slip fault. We used eleven descending Advanced Synthetic Aperture Radar (SAR) images, acquired by the European Space Agency's ENVISAT satellite from 2003 to 2006, to map surface displacement over 23 increments ranging in time from 30 to 2 months. A 30 month SAR interferogram of the area shows that the regional folds and faults are active south of the mountain front, but are dampened by the allochthonous salt that otherwise appears to be merely degrading at rates that vary with the season. Interferograms for shorter epochs display different patterns of fault blocks in the country rocks that rose and fell with the seasons. By relating surface displacements mapped in these interferograms to the contemporaneous seismic record, we find that seismic faults reactivate repeatedly while their kinematics may have inverted on remarkably short timescales. Seismic disturbances propagate very slowly and faults are longer than expected for earthquakes with ML<3.5, indicating that the regional strains are more aseismic than anticipated by earlier studies.
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13.
  • Geodetic horizontal velocity and strain rate fields around Lake Vänern (SW Sweden) derived from GPS measurements between 1997 and 2011
  • 2012
  • Proceedings (redaktörskap) (refereegranskat)abstract
    • In 1989, the Värmland GPS network consisting of 8 stations spaced an average of 60 km apart was setup to monitor the ongoing deformation in and around Lake Vänern due to tectonic and mainly Glacial Isostatic Adjustment (GIA) processes in Fennoscandia. This network covers an area of about 10000 km2, straddles the Protogine and the Mylonite zones and includes one of the most active seismic zones of Sweden. We use GAMIT-GLOBK software to process the past GPS data, collected in October 1997, the only campaign that was measured with choke ring antenna, and the new GPS measurements in October 2010 and 2011 to estimate station velocities. We also integrate our local network with the SWEPOS (Swedish Permanent GPS network) and IGS (International GNSS Service) stations to better constrain the velocity fields in ITRF2008 and Eurasia-fixed reference frames. Since the rates of horizontal movements are very slow (less than 1 mm/year), our measurements in longer time spans (at least in 13 years, between 1997 to 2010, 2011 and planned 2012) better resolve the tectonic signal from the noise. Preliminary results obtained from campaign-mode measurements in 1997, 2010 and 2011 agree well with those reported in the latest study by Lidberg et al. (2010) who used the data from permanent GPS stations of the BIFROST (Baseline Inferences for Fennoscandian Rebound Observations Sea Level and Tectonics) project. Strain-rate analysis resulting from the obtained velocities illustrates the overall extensional component trending NW-SE with local variations. Adding more campaigns in 2012 and 2013 will surely increase the reliability of our analysis. The velocity field obtained from this research will add more details to the tectonic picture generated by BIFROST. The results are also relevant to GIA modeling, geodetic vs. seismic strain accumulation, waste isolation and seismic hazards.
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14.
  • Koyi, Hemin, et al. (författare)
  • Shear zones between rock units with no relative movement
  • 2013
  • Ingår i: Journal of Structural Geology. - : Elsevier BV. - 0191-8141 .- 1873-1201. ; 50:SI, s. 82-90
  • Tidskriftsartikel (refereegranskat)abstract
    • Shear zones are normally viewed as relatively narrow deformation zones that accommodate relative displacement between two “blocks” that have moved past each other in opposite directions. This study reports localized zones of shear between adjacent blocks that have not moved past each other. Such deformation zones, which we call wakes, form due to the movement of exotic blocks within a viscous medium (denser blocks sinking within a salt structure, (the paths) between separated boudins), melt in partially molten surroundings (melt movement during migmatisation), or solid blocks sinking through a partially molten magma body (stoping). From the fluid dynamics perspective these shear zones can be regarded as low Reynolds number deformation zones within the wake of a body moving through a viscous medium. While compact moving bodies (aspect ratio 1:1:1) generate axial symmetric (cone like) shear zones or wakes, elongated bodies (vertical plates or horizontal rod-like bodies) produce tabular shear zones or wakes. Unlike conventional shear zones across which shear indicators usually display consistent symmetries, shear indicators on either side of the shear zone or wake reported here show reverse kinematics. Thus profiles exhibit shear zones with opposed senses of movement across their center-lines or -planes.We have used field observations and results from analytical and numerical models to suggest that examples of wakes are the transit paths that develop where denser blocks sink within salt structures, bodies of melt rise through migmatites, between boudins separated by progressive extension and (perhaps) where slabs of subducted oceanic lithosphere delaminate from the continental crust and sink into the asthenosphere. We also argue that such shear zones may be more common than they have been given credit for and may be responsible for some reverse kinematics reported in shear zones.
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15.
  • Mukherjee, Soumyajit, et al. (författare)
  • Implications of channel flow analogue models for extrusion of the Higher Himalayan Shear Zone with special reference to the out-of-sequence thrusting
  • 2012
  • Ingår i: International journal of earth sciences. - : Springer Science and Business Media LLC. - 1437-3254 .- 1437-3262. ; 101:1, s. 253-272
  • Tidskriftsartikel (refereegranskat)abstract
    • The Higher Himalayan Shear Zone (HHSZ) contains a ductile top-to-N/NE shear zone-the South Tibetan detachment system-lower (STDS(L)) and an out-of-sequence thrust (OOST) as well as a top-to-N/NE normal shear at its northern boundary and ubiquitously distributed compressional top-to-S/SW shear throughout the shear zone. The OOST that was active between 22 Ma and the Holocene, varies in thickness from 50 m to 6 km and in throw from 1.4 to 20 km. Channel flow analogue models of this structural geology were performed in this work. A Newtonian viscous polymer (PDMS) was pushed through a horizontal channel leading to an inclined channel with parallel and upward-diverging boundaries analogous to the HHSZ and allowed to extrude to the free surface. A top-to-N/NE shear zone equivalent to the STDS(U) developed spontaneously. This also indirectly connotes an independent flow confined to the southern part of the HHSZ gave rise to the STDS(L). The PDMS originally inside the horizontal channel extruded at a faster rate through the upper part of the inclined channel. The lower boundary of this faster PDMS defined the OOST. The model OOST originated at the corner and reached the vent at positions similar to the natural prototype some time after the channel flow began. The genesis of the OOST seems to be unrelated to any rheologic contrast or climatic effects. Profound variations in the flow parameters along the HHSZ and the extrusive force probably resulted in variations in the timing, location, thickness and slip parameters of the OOST. Variation in pressure gradient within the model horizontal channel, however, could not be matched with the natural prototype. Channel flow alone presumably did not result in southward propagation of deformation in the Himalaya.
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16.
  • Mukherjee, S., et al. (författare)
  • Viscosity estimates of salt in the Hormuz and Namakdan salt diapirs, Persian Gulf
  • 2010
  • Ingår i: Geological Magazine. - : Cambridge University Press. - 0016-7568 .- 1469-5081. ; 147:4, s. 497-507
  • Tidskriftsartikel (refereegranskat)abstract
    • The parabolic surface profiles of the Hormuz and Namakdan salt diapirs in the Persian Gulf suggest that they have been extruding with Newtonian viscous rheologies for the last 104 years. We derive velocity profiles for these diapirs, neglecting gravitational spreading and erosion/dissolution while assuming incompressible Newtonian rheology of the salt. Fitting known rates of extrusion at specific points in its elliptical cross-section, the dynamic viscosity of the salt of the Hormuz diapir is found to range between 1018 and 1021 Pa s. Approximating its sub-circular cross-section to a perfect circle, the range of viscosity of the salt of the Namakdan diapir is obtained as 1017–1021 Pa s. These calculated viscosities fall within the range for naturally flowing salts elsewhere and for other salt diapirs but are broader than those for salts with Newtonian rheology deforming at room temperatures. The salts of the Hormuz and Namakdan diapirs are expected to exhibit a broader range of grain size, which matches the limited existing data.
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17.
  • Mulchrone, Kieran F., et al. (författare)
  • Constraining the strain ellipsoid and deformation parameters using deformed single layers : A computational approach assuming pure shear and isotropic volume change
  • 2014
  • Ingår i: Journal of Structural Geology. - : Elsevier BV. - 0191-8141 .- 1873-1201. ; 62, s. 194-206
  • Tidskriftsartikel (refereegranskat)abstract
    • If the deformation history of individual layers in a deformed rock mass can be appropriately analysed and categorised then the surface of no elongation (snoe) and the surface of no infinitesimal elongation (snoie) may be identified. A computational approach to automatically identify the polar snoe and snoie is presented and tested on synthetic and natural examples. Additionally the equations that allow extraction of parameter values, which quantify the deformation, are derived here. Two fundamental assumptions are made: 1) the progressive deformation is pure shear and 2) the associated volume change is isotropic. The proposed method is tested using data generated from known deformation sequences and is found to work reasonably well. However, as is the case with most methods of analysis, suitable data with a wide range of orientations is required for reliable results.
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18.
  • Squires, L. N., et al. (författare)
  • Serotonin and its metabolism in basal deuterostomes: insights from Strongylocentrotus purpuratus and Xenoturbella bocki
  • 2010
  • Ingår i: Journal of Experimental Biology. - : The Company of Biologists. - 0022-0949 .- 1477-9145. ; 213:15, s. 2647-2654
  • Tidskriftsartikel (refereegranskat)abstract
    • Serotonin (5-HT), an important molecule in metazoans, is involved in a range of biological processes including neurotransmission and neuromodulation. Both its creation and release are tightly regulated, as is its removal. Multiple neurochemical pathways are responsible for the catabolism of 5-HT and are phyla specific; therefore, by elucidating these catabolic pathways we glean greater understanding of the relationships and origins of various transmitter systems. Here, 5-HT catabolic pathways were studied in Strongylocentrotus purpuratus and Xenoturbella bocki, two organisms occupying distinct positions in deuterostomes. The 5-HT-related compounds detected in these organisms were compared with those reported in other phyla. In S. purpuratus, 5-HT-related metabolites include N-acetyl serotonin, gamma-glutamyl-serotonin and 5-hydroxyindole acetic acid; the quantity and type were found to vary based on the specific tissues analyzed. In addition to these compounds, varying levels of tryptamine were also seen. Upon addition of a 5-HT precursor and a monoamine oxidase inhibitor, 5-HT itself was detected. In similar experiments using X. bocki tissues, the 5-HT-related compounds found included 5-HT sulfate, gamma-glutamyl-serotonin and 5-hydroxyindole acetic acid, as well as 5-HT and tryptamine. The sea urchin metabolizes 5-HT in a manner similar to both gastropod mollusks, as evidenced by the detection of gamma-glutamyl-serotonin, and vertebrates, as indicated by the presence of 5-hydroxyindole acetic acid and N-acetyl serotonin. In contrast, 5-HT metabolism in X. bocki appears more similar to common protostome 5-HT catabolic pathways.
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  • Talbot, Christopher J. (författare)
  • Empirical paths of poles to planes (eppps) constrain the kinematics of geological shear zones
  • 2014
  • Ingår i: Journal of Structural Geology. - : Elsevier BV. - 0191-8141 .- 1873-1201. ; 66, s. 309-333
  • Tidskriftsartikel (refereegranskat)abstract
    • Ductile shear zones are tabular bodies of deformed rocks bound by less deformed wall rocks. This work introduces a simple empirical approach to analysing the 3D kinematics of shear zones. The orientations of pre-shear planar markers distorted across natural shear zones by local strains are systematically measured and plotted as poles on lower hemisphere equal area projections that constrain smooth empirical paths of poles to planes (eppps). Such eppps recording local strain gradients are used to fix a reference frame to the plane of greatest shear in any homogeneous bulk strain. Assuming that space can be taken as a proxy for time, the curvatures of pre-shear planar markers across shear zones are interpreted as the records of the 3D bulk strain histories of shear zones. The sig- or zig-moidal symmetries of sheared markers record different amounts of the same general strain within the same overall movement pattern (i.e. in a constant flow field) whatever its geometry or history. In effect eppps represent the strain memories of shear zones with successively inward readings recording successively younger shearing. In planes other than the bulk XY, great circle eppps indicate simple shear while hyperbolic eppps indicate pure shear. Eppps for suites of shear zones in Proterozoic gneisses in Sweden exhibit the parabolic shapes indicative of pure rather than simple shear.
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21.
  • Talbot, Christopher J. (författare)
  • Lessons from the first 100 minimum strain ellipsoids constrained in gneisses deformed at high metamorphic grade
  • 2014
  • Ingår i: Earth-Science Reviews. - 0012-8252 .- 1872-6828. ; 138, s. 231-267
  • Tidskriftsartikel (refereegranskat)abstract
    • The Talbot 1970 method for constraining minimum strain ellipsoids has recently been updated by a computational approach and theory that can automatically constrain more complete strain ellipsoids with sufficient data. It is thus worth appreciating the lessons learned from the 100 minimum strain ellipsoids constrained mainly in gneisses deformed at high metamorphic grades published over the last four decades. In essence, the method measures the strikes and dips of either competent or incompetent active single layers with shortened or extended deformation structures (on scales of <1 m) imparted by inhomogeneous strains to constrain ellipsoids on larger scales. The data reviewed here describe the homogeneous strains of similar to 100 localities (1-200 m(2)) in 16 districts (10-similar to 200 km(2)) in 8 gneiss regions (1-200 km(2)). Relating these ellipsoids to the natural reference frames provided by structures on intervening and larger scales allows study of the dynamics of deformation geology rather than merely structural geology. Several limitations expected on (outdated) theoretical grounds were overcome so that treating deformation fields as paths on a variety of deformation plots allowed recognition of multiple deformations, rotations, volume changes and even the distinction of contemporary pure and simple shears. By restricting measurements to single layers with length/thickness ratios >10, the competence contrast between the markers and their country rocks does not affect the ellipsoids - but can be seen to affect the structures that develop on intervening and larger scales.
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23.
  • Zarei, M., et al. (författare)
  • Karst development on a mobile substrate: Konarsiah salt extrusion, Iran
  • 2012
  • Ingår i: Geological Magazine. - 0016-7568 .- 1469-5081. ; 149:3, s. 412-422
  • Tidskriftsartikel (refereegranskat)abstract
    • Most karst terranes develop slowly on static limestone substrates as part of the global hydrological cycle. Here we introduce the novel concept of a karst morphology developing very rapidly on a more soluble substrate of salt (NaCl) that is moving through its own global cycle. We open with a reminder of karst features and processes in limestone. We then illustrate the global salt cycle using the 180 or so extrusions of Hormoz salt in the Zagros Mountains of Iran. After describing the geology of an example, we consider how it fits into the evolution of salt extrusions. This example, Konarsiah, was chosen for its simple hydrology. Konarsiah is covered by residual soils of the insoluble components that remain in place as the Hormoz salt is dissolved. Dolines in the surface of these soils enlarge and the soils thicken as the moving salt dissolves. The long-term rate of salt dissolution and soil production on Konarsiah are estimated using traditional methods. The calculated age of the thickest, most distal soil is used to constrain the average rate at which the underlying salt flows downslope after extruding from two vents. The average velocities constrained for salt flow are lower than rates of displacement of markers near the summit of Konarsiah measured at irregular intervals over five years. Salt extruding from recently truncated diapirs near the arid south coast of Iran exhibit all the features seen in classical karst terranes. In the more humid mountains inland, vegetated soils protect salt extrusions like Konarsiah from erosion and limit their salt karst features. Soil covers also probably even out salt flow velocities. Salt extrusions advance when such protective covers grow and thicken in humid conditions. They retreat when such protection is lost to erosion in drier conditions. These external signs complement internal recumbent folds in extruded salt that signal intervals of faster salt flow when wet than dry. They also add to the features that render salt extrusions records of climate change.
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