| 1. |
- A. Marques, Ana F., et al.
(författare)
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The Seven Sisters Hydrothermal System : First Record of Shallow Hybrid Mineralization Hosted in Mafic Volcaniclasts on the Arctic Mid-Ocean Ridge
- 2020
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Ingår i: Minerals. - : MDPI AG. - 2075-163X.
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Annan publikation (övrigt vetenskapligt/konstnärligt)abstract
- We document the discovery of an active, shallow, seafloor hydrothermal system (known as the Seven Sisters Vent Field) hosted in mafic volcaniclasts at a mid-ocean ridge setting. The vent field is located at the southern part of the Arctic mid-ocean ridge where it lies on top of a flat-topped volcano at ~130 m depth. Up to 200 deg C phase-separating fluids vent from summit depressions in the volcano, and from pinnacle-like edifices on top of large hydrothermal mounds. The hydrothermal mineralization at Seven Sisters manifests as a replacement of mafic volcaniclasts, as direct intraclast precipitation from the hydrothermal fluid, and as elemental sulfur deposition within orifices. Barite is ubiquitous, and is sequentially replaced by pyrite, which is the first sulfide to form, followed by Zn-Cu-Pb-Ag bearing sulfides, sulfosalts, and silica. The mineralized rocks at Seven Sisters contain highly anomalous concentrations of ‘epithermal suite’ elements such as Tl, As, Sb and Hg, with secondary alteration assemblages including silica and dickite. Vent fluids have a pH of ~5 and are Ba and metal depleted. Relatively high dissolved Si (~7.6 mmol/L Si) combined with low (0.2–0.4) Fe/Mn suggest high-temperature reactions at ~150 bar. A delta-13C value of -5.4 permil in CO2 dominated fluids denotes magmatic degassing from a relatively undegassed reservoir. Furthermore, low CH4 and H2 (<0.026 mmol/kg and <0.009 mmol/kg, respectively) and 3He/4He of ~8.3 R/Racorr support a MORB-like, sediment-free fluid signature from an upper mantle source. Sulfide and secondary alteration mineralogy, fluid and gas chemistry, as well as delta-34S and 87Sr/86Sr values in barite and pyrite indicate that mineralization at Seven Sisters is sustained by the input of magmatic fluids with minimal seawater contribution. 226Ra/Ba radiometric dating of the barite suggests that this hydrothermal system has been active for at least 4670 +/- 60 yr.
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| 2. |
- Abalde, Samuel, et al.
(författare)
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A Combined Transcriptomics and Proteomics Approach Reveals the Differences in the Predatory and Defensive Venoms of the Molluscivorous Cone Snail Cylinder ammiralis (Caenogastropoda: Conidae)
- 2021
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Ingår i: Toxins. - : MDPI AG. - 2072-6651. ; 13:9, s. 642-642
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Tidskriftsartikel (refereegranskat)abstract
- Venoms are complex mixtures of proteins that have evolved repeatedly in the animal kingdom. Cone snail venoms represent one of the best studied venom systems. In nature, this venom can be dynamically adjusted depending on its final purpose, whether to deter predators or hunt prey. Here, the transcriptome of the venom gland and the proteomes of the predation-evoked and defensive venoms of the molluscivorous cone snail Cylinder ammiralis were catalogued. A total of 242 venom-related transcripts were annotated. The conotoxin superfamilies presenting more different peptides were O1, O2, T, and M, which also showed high expression levels (except T). The three precursors of the J superfamily were also highly expressed. The predation-evoked and defensive venoms showed a markedly distinct profile. A total of 217 different peptides were identified, with half of them being unique to one venom. A total of 59 peptides ascribed to 23 different protein families were found to be exclusive to the predatory venom, including the cono-insulin, which was, for the first time, identified in an injected venom. A total of 43 peptides from 20 protein families were exclusive to the defensive venom. Finally, comparisons of the relative abundance (in terms of number of peptides) of the different conotoxin precursor superfamilies showed that most of them present similar abundance regardless of the diet.
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| 3. |
- Adroit, Benjamin, et al.
(författare)
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Patterns of insect damage types reflect complex environmental signal in Miocene forest biomes of Central Europe and the Mediterranean
- 2021
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Ingår i: Global and Planetary Change. - Amsterdam : Elsevier. - 0921-8181 .- 1872-6364. ; 199
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Tidskriftsartikel (refereegranskat)abstract
- Ecosystems are defined by the community of living organisms and how they interact together and with theirenvironment. Insects and plants are key taxa in terrestrial ecosystems and their network determines the trophicstructure of the environment. However, what drives the interactions between plants and insects in modern andfossil ecosystems is not well understood. In this study, we analyzed insect damage richness and frequency in 5000 fossil leaves deposited during the early Miocene at 20–17 Ma along a latitudinal gradient from Europe (twolocalities in Czech Republic) to Turkey (one locality) in a temperate climate setting. Damage frequency wasmainly linked with abiotic factors (temperature, precipitation seasonality) whereas damage richness was mainlylinked with biotic factors (plant richness, biome). Univariate analysis of insect damage types consistently suggested closer trophic similarity between the Mediterranean and either the one or the other Central European plant assemblage. In contrast, multivariate analysis of all insect damage types indicated closer similarity between the two Central European sites highlighting the importance of biogeographic legacy and geographic closeness to the plant-insect interaction patterns. Our results underscore the high complexity of the herbivory network andcall for careful interpretations of plant-insect interaction patterns in palaeoecological studies. Finally, comparing the trophic similarity between different localities using total evidence plots as done in this work might be apromising complementary method in comparative studies of plant-insect interactions.
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| 4. |
- Ahmed, Mohammed, et al.
(författare)
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A draft transcriptome of a parasite Neocamacolaimus parasiticus (Camacolaimidae, Plectida)
- 2021
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Ingår i: Journal of nematology. - : Walter de Gruyter GmbH. - 0022-300X .- 2640-396X. ; 53
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Tidskriftsartikel (refereegranskat)abstract
- Camacolaimidae is a clade of nematodes that include both freeliving epistrate feeding forms and parasites of marine protozoans and invertebrates. Neocamacolaimus parasiticus is a parasite of marine polychaete worms. Given its phylogenetic affinities to free-living species, Neocamacolaimus can be a reference for research of the origin of parasitism in an aquatic environment. Here, we present a draft transcriptome obtained from a single post-parasitic juvenile individual of this species. The final assembly consists of 19,180 protein coding sequences (including isoforms) with the following BUSCO scores for Nematoda: 65.38% complete, 9.06% partial, and 25.56% missing, and for Metazoa: 79.45% complete, 3.17% partial, and 17.38% missing.
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| 5. |
- Ahmed, Mohammed, et al.
(författare)
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Description of a new marine predatory nematode Latronema dyngi sp. nov. (Nematoda, Chromadorida, Selachinematidae) from the west coast of Sweden and an updated phylogeny of Chromadoria
- 2020
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Ingår i: Marine Biodiversity. - : Springer Science and Business Media LLC. - 1867-1616 .- 1867-1624. ; 50:113, s. 1-11
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Tidskriftsartikel (refereegranskat)abstract
- A new nematode species, Latronema dyngi sp. nov., is described from Skagerrak off the west coast of Sweden with the type locality near Dyngö island. Latronema dyngi sp. nov. is characterized by multispiral amphideal fovea with circular outline, 0.2– 0.3 corresponding body diameters wide in males and 0.1–0.2 corresponding body diameters wide in females, 12 cuticular longitudinal ridges and 18–27 precloacal supplements in males. Latronema dyngi sp. nov. most closely resembles L. orcinum in terms of body length; demanian ratios a, b, c and c′; number of amphid turns in males; and the ratio of spicule length to cloacal body diameter. The two species can be differentiated by the number longitudinal ridges on the cuticle (12 for Latronema dyngi sp. nov. vs 20–22 for L. orcinum) and spicule length (65–78 μm for L. dyngi vs 60 for L. orcinum) and shape (weakly arcuate for L. dyngi sp. nov. vs strongly arcuate for L. orcinum). We also performed a maximum likelihood phylogenetic analysis on over 250 nematodes of the subclass Chromadoria based on their nearly full-length 18S rDNA sequences. In agreement with previous studies, our analysis supported Selachinematidae as a monophyletic group and placed Richtersia Steiner, 1916 within Desmodoridae Filipjev, 1922 or just outside of the main Desmodorida clade with the latter placement not well supported.
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| 6. |
- Ahmed, Mohammed, et al.
(författare)
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Revision of the genus Cobbionema Filipjev, 1922 (Nematoda, Chromadorida, Selachinematidae)
- 2020
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Ingår i: European journal of taxonomy. - : Museum National D'Histoire Naturelle. - 2118-9773. ; 702, s. 1-34
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Tidskriftsartikel (refereegranskat)abstract
- This paper reports on the genus Cobbionema Filipjev, 1922 in Sweden with the description of four species and a revision of the genus. Cobbionema acrocerca Filipjev, 1922 is relatively small in size, with a tail that has a conical proximal and a digitate distal section. Cobbionema cylindrolaimoides Schuurmans Stekhoven, 1950 is similar to C. acrocerca in most characters except having a larger body size and heavily cuticularized mandibles. Cobbionema brevispicula sp. nov. is characterised by short spicules and a conoid tail. Cobbionema acuminata sp. nov. is characterised by a long two-part spicule, a conical tail and three (one mid dorsal and two ventrosublateral) sharply pointed tines in the anterior chamber of the stoma that are located more anterior than in all the other species. We also present a molecular phylogeny of the family based on the nearly full-length 18S and the D2-D3 expansion segment of the 28S rRNA genes. Maximum Likelihood and Bayesian trees inferred from both genes strongly support a clade that included Cobbionema, Demonema Cobb, 1894 and Halichoanolaimus de Man, 1888 and another clade with Gammanema Cobb, 1920 and Latronema Wieser, 1954 nested together. None of the trees supported the monophyly of the subfamilies Choniolaiminae and Selachinematinae.
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| 7. |
- Ahmed, Mohammed, et al.
(författare)
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Twenty Years after De Ley and Blaxter—How Far Did We Progress in Understanding the Phylogeny of the Phylum Nematoda?
- 2021
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Ingår i: Animals. - : MDPI AG. - 2076-2615. ; 11:12, s. 3479-3479
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Tidskriftsartikel (refereegranskat)abstract
- Molecular phylogenetics brought radical changes to our understanding of nematode evolution, resulting in substantial modifications to nematode classification implemented by De Ley and Blaxter and widely accepted now. Numerous phylogenetic studies were subsequently published that both improved and challenged this classification. Here we present a summary of these changes. We created cladograms that summarise phylogenetic relationships within Nematoda using phylum-wide to superfamily-wide molecular phylogenies published in since 2005, and supplemented with the phylogenetic analyses for Enoplia and Chromadoria with the aim of clarifying the position of several taxa. The results show which parts of the Nematode tree are well resolved and understood, and which parts require more research, either by adding taxa that have not been included yet (increasing taxon coverage), or by changing the phylogenetic approach (improving data quality, using different types of data or different methods of analysis). The currently used classification of the phylum Nematoda in many cases does not reflect the phylogeny and in itself requires numerous improvements and rearrangements.
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