| 1. |
- Cirtwill, Alyssa R., et al.
(författare)
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Building food networks from molecular data : Bayesian or fixed-number thresholds for including links
- 2021
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Ingår i: Basic and Applied Ecology. - : Elsevier BV. - 1439-1791 .- 1618-0089. ; 50, s. 67-76
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Tidskriftsartikel (refereegranskat)abstract
- DNA metabarcoding of faeces or gut contents has greatly increased our ability to construct networks of predators and prey (food webs) by reducing the need to observe predation events directly. The possibility of both false positives and false negatives in DNA sequences, however, means that constructing food networks using DNA requires researchers to make many choices as to which DNA sequences indicate true prey for a particular predator. To date, DNA-based food networks are usually constructed by including any DNA sequence with more than a threshold number of reads. The logic used to select this threshold is often not explained, leading to somewhat arbitrary-seeming networks. As an alternative strategy, we demonstrate how to construct food networks using a simple Bayesian model to suggest which sequences correspond to true prey. The networks obtained using a well-chosen fixed cutoff and our Bayesian approach are very similar, especially when links are resolved to prey families rather than species. We therefore recommend that researchers reconstruct diet data using a Bayesian approach with well-specified assumptions rather than continuing with arbitrary fixed cutoffs. Explicitly stating assumptions within a Bayesian framework will lead to better-informed comparisons between networks constructed by different groups and facilitate drawing together individual case studies into more coherent ecological theory. Note that our approach can easily be extended to other types of ecological networks constructed by DNA metabarcoding of pollen loads, identification of parasite DNA in faeces, etc.
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| 2. |
- Hambäck, Peter A., et al.
(författare)
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More intraguild prey than pest species in arachnid diets may compromise biological control in apple orchards
- 2021
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Ingår i: Basic and Applied Ecology. - : Elsevier BV. - 1439-1791 .- 1618-0089. ; 57, s. 1-13
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Tidskriftsartikel (refereegranskat)abstract
- Understanding the full diet of natural enemies is necessary for evaluating their role as biocontrol agents, because many enemy species do not only feed on pests but also on other natural enemies. Such intraguild predation can compromise pest control if the consumed enemies are actually better for pest control than their predators. In this study, we used gut metabarcoding to quantify diets of all common arachnid species in Swedish and Spanish apple orchards. For this purpose, we designed new primers that reduce amplification of arachnid predators while retaining high amplification of all prey groups. Results suggest that most arachnids consume a large range of putative pest species on apple but also a high proportion of other natural enemies, where the latter constitute almost a third of all prey sequences. Intraguild predation also varied between regions, with a larger content of heteropteran bugs in arachnid guts from Spanish orchards, but not between orchard types. There was also a tendency for cursorial spiders to have more intraguild prey in the gut than web spiders. Two groups that may be overlooked as important biocontrol agents in apple orchards seem to be theridiid web spiders and opilionids, where the latter had several small-bodied pest species in the gut. These results thus provide important guidance for what arachnid groups should be targets of management actions, even though additional information is needed to quantify all direct and indirect interactions occurring in the complex arthropod food webs in fruit orchards.
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| 3. |
- Hambäck, Peter A., et al.
(författare)
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Species composition of shoreline wolf spider communities vary with salinity, but their diets vary with wrack inflow
- 2022
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Ingår i: Ecology and Evolution. - : Wiley. - 2045-7758. ; 12:12
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Tidskriftsartikel (refereegranskat)abstract
- Wolf spiders are typically the most common group of arthropod predators on both lake and marine shorelines because of the high prey availability in these habitats. However, shores are also harsh environments due to flooding and, in proximity to marine waters, to toxic salinity levels. Here, we describe the spider community, prey availabilities, and spider diets between shoreline sites with different salinities, albeit with comparatively small differences (5‰ vs. 7‰). Despite the small environmental differences, spider communities between lower and higher saline sites showed an almost complete species turnover. At the same time, differences in prey availability or spider gut contents did not match changes in spider species composition but rather changed with habitat characteristics within a region, where spiders collected at sites with thick wrack beds had a different diet than sites with little wrack. These data suggest that shifts in spider communities are due to habitat characteristics other than prey availabilities, and the most likely candidate restricting species in high salinity would be saline sensitivity. At the same time, species absence from low-saline habitats remains unresolved.
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| 4. |
- Liénart, Camilla, et al.
(författare)
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A sprinkling of gold dust : Pine pollen as a carbon source in Baltic Sea coastal food webs
- 2022
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Ingår i: Limnology and Oceanography. - : Wiley. - 0024-3590 .- 1939-5590. ; 67:1, s. 53-65
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Tidskriftsartikel (refereegranskat)abstract
- Allochthonous subsidies to marine ecosystems have mainly focused on biogeochemical cycles, but there has also been recent interest in how terrestrial carbon (C) influences marine food webs. In the Baltic Sea, pine (Pinus sylvestris) pollen is found in large amounts in shallow bays in early summer. Pollen is a significant C-source in freshwater ecosystems and may also be important in coastal food webs. We examined the consumption of pollen and autochthonous resources by benthic invertebrates in shallow bays of the Baltic Sea. We used stable isotopes to estimate diets and reconstructed consumer-resource networks (food webs) for grazers and particulate organic matter (POM)-feeders to compare how these different guilds used pollen. We found that P. sylvestris pollen was consumed in small amounts by a variety of animals and in some cases made up a sizeable proportion of invertebrates' diets. However, invertebrates generally depended less on pollen than other resources. The degree of pollen consumption was related to feeding traits, with generalist invertebrate grazers consuming more pollen (> 10% of diet) than the more specialist POM-feeders (< 5% of diet contributed by pollen). POM-feeders may consume additional microbially-degraded pollen which was not identifiable in our model. We suggest that pollen is a small but substantial allochthonous C-source in shallow bay food webs of the Baltic Sea, with the potential to affect the dynamics of these ecosystems.
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