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1.	Andersson, Leif, et al. (author) Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project 2015 In: Genome Biology. - : Springer Science and Business Media LLC. - 1465-6906 .- 1474-760X .- 1474-7596. ; 16 Journal article (peer-reviewed)abstract We describe the organization of a nascent international effort, the Functional Annotation of Animal Genomes (FAANG) project, whose aim is to produce comprehensive maps of functional elements in the genomes of domesticated animal species.
2.	Tao, Feng, et al. (author) Microbial carbon use efficiency promotes global soil carbon storage 2023 In: Nature. - 0028-0836 .- 1476-4687. ; 618:7967, s. 981-985 Journal article (peer-reviewed)abstract Soils store more carbon than other terrestrial ecosystems. How soil organic carbon (SOC) forms and persists remains uncertain, which makes it challenging to understand how it will respond to climatic change. It has been suggested that soil microorganisms play an important role in SOC formation, preservation and loss. Although microorganisms affect the accumulation and loss of soil organic matter through many pathways, microbial carbon use efficiency (CUE) is an integrative metric that can capture the balance of these processes. Although CUE has the potential to act as a predictor of variation in SOC storage, the role of CUE in SOC persistence remains unresolved. Here we examine the relationship between CUE and the preservation of SOC, and interactions with climate, vegetation and edaphic properties, using a combination of global-scale datasets, a microbial-process explicit model, data assimilation, deep learning and meta-analysis. We find that CUE is at least four times as important as other evaluated factors, such as carbon input, decomposition or vertical transport, in determining SOC storage and its spatial variation across the globe. In addition, CUE shows a positive correlation with SOC content. Our findings point to microbial CUE as a major determinant of global SOC storage. Understanding the microbial processes underlying CUE and their environmental dependence may help the prediction of SOC feedback to a changing climate.
3.	Abramoff, Rose Z., et al. (author) How much carbon can be added to soil by sorption? 2021 In: Biogeochemistry. - : Springer Nature. - 0168-2563 .- 1573-515X. ; 152:2-3, s. 127-142 Journal article (peer-reviewed)abstract Quantifying the upper limit of stable soil carbon storage is essential for guiding policies to increase soil carbon storage. One pool of carbon considered particularly stable across climate zones and soil types is formed when dissolved organic carbon sorbs to minerals. We quantified, for the first time, the potential of mineral soils to sorb additional dissolved organic carbon (DOC) for six soil orders. We compiled 402 laboratory sorption experiments to estimate the additional DOC sorption potential, that is the potential of excess DOC sorption in addition to the existing background level already sorbed in each soil sample. We estimated this potential using gridded climate and soil geochemical variables within a machine learning model. We find that mid- and low-latitude soils and subsoils have a greater capacity to store DOC by sorption compared to high-latitude soils and topsoils. The global additional DOC sorption potential for six soil orders is estimated to be 107 ± 13 Pg C to 1 m depth. If this potential was realized, it would represent a 7% increase in the existing total carbon stock.
4.	Liu, Ta-Wei, et al. (author) Dynamic changes in the metabolome and microbiome during Citrus depressa Hayata liquid fermentation 2024 In: Food Chemistry. - 0308-8146 .- 1873-7072. ; , s. 141225-141225 Journal article (peer-reviewed)

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Type of publication: journal article (4)

Type of content: peer-reviewed (4)

Author/Editor: Huang, Yuanyuan (2); Ciais, Philippe (2); Hugelius, Gustaf, 19 ... (1); Abramoff, Rose Z. (1); Georgiou, Katerina (1); Guenet, Bertrand (1); show more...; Torn, Margaret S. (1); Zhang, Haicheng (1); Feng, Wenting (1); Jagadamma, Sindhu (1); Kaiser, Klaus (1); Kothawala, Dolly (1); Mayes, Melanie A. (1); Manzoni, Stefano, 19 ... (1); Luo, Yiqi (1); Reichstein, Markus (1); Wang, Ying Ping (1); Clarke, Laura (1); Tao, Feng (1); Andersson, Leif (1); Moore, Stephen (1); Carvalhais, Nuno (1); Archibald, Alan L. (1); Bottema, Cynthia D. (1); Brauning, Rudiger (1); Burgess, Shane C. (1); Burt, Dave W. (1); Casas, Eduardo (1); Cheng, Hans H. (1); Couldrey, Christine (1); Dalrymple, Brian P. (1); Elsik, Christine G. (1); Foissac, Sylvain (1); Giuffra, Elisabetta (1); Groenen, Martien A. (1); Hayes, Ben J. (1); Huang, LuSheng S. (1); Khatib, Hassan (1); Kijas, James W. (1); Kim, Heebal (1); Lunney, Joan K. (1); McCarthy, Fiona M. (1); McEwan, John C. (1); Nanduri, Bindu (1); Notredame, Cedric (1); Palti, Yniv (1); Plastow, Graham S. (1); Reecy, James M. (1); Rohrer, Gary A. (1); Sarropoulou, Elena (1); show less...

University: Uppsala University (2); Royal Institute of Technology (1); Stockholm University (1); Swedish University of Agricultural Sciences (1)

Language: English (4)

Research subject (UKÄ/SCB): Agricultural Sciences (4)Undo refine; Natural sciences (3); Medical and Health Sciences (1)

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